Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20566
(607 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 86 2e-17
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 60 1e-09
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 60 1e-09
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 60 2e-09
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 60 2e-09
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 57 1e-08
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 54 6e-08
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 54 8e-08
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 47 1e-05
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 46 2e-05
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 43 2e-04
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 41 8e-04
Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical pr... 32 0.37
U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor... 32 0.37
U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein. 32 0.37
Z83107-2|CAB05503.2| 356|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z83107-1|CAB05506.2| 461|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 27 7.9
U00047-3|AAA50689.2| 225|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 27 7.9
AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical... 27 7.9
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical... 27 7.9
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 85.8 bits (203), Expect = 2e-17
Identities = 41/81 (50%), Positives = 54/81 (66%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A MI RR KND++VAGGG+++M++ +R + GK+Q A +AFE IPRQL
Sbjct: 390 AIMIVRRAKKNDSIVAGGGAIEMELSRLIREHSKGIEGKDQAFWMAYGQAFEIIPRQLCQ 449
Query: 186 NAGLDGTGLLNKLRQKHAAGE 248
NAGLD +LNKLR +HA GE
Sbjct: 450 NAGLDALDVLNKLRHRHAQGE 470
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +2
Query: 227 AEARRWGAHDGVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIKNVK 403
A+ +W G+D+ V DN CVWEP++VK NA++AA EA +LS+D+T+KNV+
Sbjct: 467 AQGEKWA---GIDIHREAVGDNLVACVWEPSIVKRNAITAATEAACLVLSIDQTVKNVR 522
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 60.1 bits (139), Expect = 1e-09
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = +3
Query: 21 RRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLADNAGLD 200
RR +++ +VAGGG+V+ + L + L+ +EQL+VA A A IP+ LA NA D
Sbjct: 403 RRVLESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARD 462
Query: 201 GTGLLNKLRQKHAAGE 248
T L+ KLR H+ +
Sbjct: 463 STDLVTKLRAYHSKAQ 478
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 257 GVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 394
G+D+ G + DN + EPAL K+ ++ A EA IL +D+ IK
Sbjct: 490 GLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIK 535
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +3
Query: 30 IKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLADNAGLDGTG 209
+K VAG G+ ++ + + + ++AGKE L+V A RA +P + DNAGLD
Sbjct: 395 VKESKTVAGAGASEILMSSAIAVEAQKVAGKESLAVEAFGRALAQLPTIICDNAGLDSAE 454
Query: 210 LLNKLRQKHAAGEH 251
L+ +LR +HA G H
Sbjct: 455 LVTRLRAEHANGRH 468
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 245 GAHD-GVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 394
G H+ G+D+ GEV D V E VKL VS+A EAT QIL VD+ IK
Sbjct: 466 GRHNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIK 516
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +3
Query: 30 IKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLADNAGLDGTG 209
+K VAG G+ ++ + + + ++AGKE L+V A RA +P + DNAGLD
Sbjct: 395 VKESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAE 454
Query: 210 LLNKLRQKHAAGEH 251
L+ +LR +HA G H
Sbjct: 455 LVTRLRAEHANGRH 468
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 245 GAHD-GVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 394
G H+ G+D+ GEV D V E VKL VS+A EAT QIL VD+ IK
Sbjct: 466 GRHNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIK 516
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +3
Query: 30 IKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLADNAGLDGTG 209
+K VAG G+ ++ + + + ++AGKE L+V A RA +P + DNAGLD
Sbjct: 395 VKESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAE 454
Query: 210 LLNKLRQKHAAGEH 251
L+ +LR +HA G H
Sbjct: 455 LVTRLRAEHANGRH 468
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 245 GAHD-GVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 394
G H+ G+D+ GEV D V E VKL VS+A EAT QIL VD+ IK
Sbjct: 466 GRHNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIK 516
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/76 (38%), Positives = 44/76 (57%)
Frame = +3
Query: 21 RRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLADNAGLD 200
RR +++ +VAGGG+V+ + L + L+ +EQL+VA A A IP+ LA NA D
Sbjct: 403 RRVLESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARD 462
Query: 201 GTGLLNKLRQKHAAGE 248
T L+ LR H+ +
Sbjct: 463 STDLVTFLRAYHSKAQ 478
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 257 GVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 394
G+D+ G + DN + EPAL K+ ++ A EA IL +D+ IK
Sbjct: 490 GLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIK 535
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 54.4 bits (125), Expect = 6e-08
Identities = 24/72 (33%), Positives = 43/72 (59%)
Frame = +3
Query: 33 KNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLADNAGLDGTGL 212
K+ ++AG G+V++++ + S + G EQ ++ A A E +P+ +A+NAG+ T
Sbjct: 437 KDGKLLAGAGAVEIELAKEIESFGAKAPGLEQYAIKKFAHALETLPKAIAENAGMPTTET 496
Query: 213 LNKLRQKHAAGE 248
L KL +H AG+
Sbjct: 497 LTKLYAEHVAGK 508
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/96 (33%), Positives = 50/96 (52%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A + R +K A++ GGG+ +M+I LR+ G Q A A A E IP LA+
Sbjct: 408 ALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAE 467
Query: 186 NAGLDGTGLLNKLRQKHAAGEHTTVWTLSVERWWIT 293
NAGL + +LR HA G + + ++V + ++T
Sbjct: 468 NAGLSPIHTVTELRNNHANGNSS--YGVNVRKGYVT 501
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/96 (33%), Positives = 50/96 (52%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A + R +K A++ GGG+ +M+I LR+ G Q A A A E IP LA+
Sbjct: 408 ALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAE 467
Query: 186 NAGLDGTGLLNKLRQKHAAGEHTTVWTLSVERWWIT 293
NAGL + +LR HA G + + ++V + ++T
Sbjct: 468 NAGLSPIHTVTELRNNHANGNSS--YGVNVRKGYVT 501
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFE 161
A MI RR KND++VAGGG+++M++ +R + GK+Q A +AFE
Sbjct: 390 AIMIVRRAKKNDSIVAGGGAIEMELSRLIREHSKGIEGKDQAFWMAYGQAFE 441
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A + R +++ +V GGGS ++ + ++ G EQ + A A A E+IP LA+
Sbjct: 404 ALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAE 463
Query: 186 NAGLDGTGLLNKLRQK 233
N+GL L+ L+ K
Sbjct: 464 NSGLAPIDALSDLKAK 479
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A + R +++ +V GGGS ++ + ++ G EQ + A A A E+IP LA+
Sbjct: 404 ALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAE 463
Query: 186 NAGLDGTGLLNKLRQK 233
N+GL L+ L+ K
Sbjct: 464 NSGLAPIDALSDLKAK 479
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A + R +++ +V GGGS ++ + ++ G EQ + A A A E+IP LA+
Sbjct: 198 ALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAE 257
Query: 186 NAGLDGTGLLNKLRQK 233
N+GL L+ L+ K
Sbjct: 258 NSGLAPIDALSDLKAK 273
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A + R +++ +V GGGS ++ + ++ G EQ + A A A E+IP LA+
Sbjct: 404 ALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAE 463
Query: 186 NAGLDGTGLLNKLRQK 233
N+GL L+ L+ K
Sbjct: 464 NSGLAPIDALSDLKAK 479
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +3
Query: 21 RRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLADNAGLD 200
R + N +V GGG+++M + + ++ G ++ A+ A E IPR L N G
Sbjct: 401 RNIMINPKLVPGGGALEMALSREIEQQGAKMDGVKKWPYKAIGLALEVIPRTLIQNCGGS 460
Query: 201 GTGLLNKLRQKHAAGEHTTVWTLSVE 278
+ +LR HA ++ WT V+
Sbjct: 461 TIRKMTELRAIHA--QNAENWTFGVD 484
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 257 GVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIKNVK---GGEEAQ 421
GVD SG++VD +W+P V++ + A E + +L +D+ + K GGE+ +
Sbjct: 482 GVDGTSGDLVDMNKLEIWDPLAVRIQVLKTAIETSVMLLRIDDIVSGTKKAVGGEKQE 539
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 40.7 bits (91), Expect = 8e-04
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 27 TIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLADNAGLDGT 206
TI + AV+ G + ++ L+ L G+ +L A A+A IP+ LA N G D
Sbjct: 405 TIVDKAVLPGAAAFEIAAYVMLKKDVENLKGRAKLGAEAFAQALLVIPKTLAVNGGYDAQ 464
Query: 207 GLLNKL-RQKHAAGEHTTV 260
L KL +K AAG V
Sbjct: 465 ETLVKLIEEKTAAGPDIAV 483
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 257 GVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIK 394
G+D+ +G V+ + +W+ VK N++S+A +L VDE ++
Sbjct: 484 GLDLETGGAVE--PQGIWDNVTVKKNSISSATVLACNLLLVDEVMR 527
>Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical
protein E03G2.3 protein.
Length = 327
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -2
Query: 213 GVRSRPGLHCLPADEGWPQTRGP--LPPRTAAPCQPVADXKTGDGHRFACPLILRQR 49
G+ PG + LP GWP ++G LP R +P P G+G P ++ +R
Sbjct: 157 GMEGLPGTNGLPGAPGWPGSKGEDGLPGRPGSPGFPGKKGDVGNGGVPGVPGMIGER 213
>U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor
protein.
Length = 327
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -2
Query: 213 GVRSRPGLHCLPADEGWPQTRGP--LPPRTAAPCQPVADXKTGDGHRFACPLILRQR 49
G+ PG + LP GWP ++G LP R +P P G+G P ++ +R
Sbjct: 157 GMEGLPGTNGLPGAPGWPGSKGEDGLPGRPGSPGFPGKKGDVGNGGVPGVPGMIGER 213
>U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein.
Length = 327
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -2
Query: 213 GVRSRPGLHCLPADEGWPQTRGP--LPPRTAAPCQPVADXKTGDGHRFACPLILRQR 49
G+ PG + LP GWP ++G LP R +P P G+G P ++ +R
Sbjct: 157 GMEGLPGTNGLPGAPGWPGSKGEDGLPGRPGSPGFPGKKGDVGNGGVPGVPGMIGER 213
>Z83107-2|CAB05503.2| 356|Caenorhabditis elegans Hypothetical
protein F32A7.3b protein.
Length = 356
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 233 LLPQFIEESGPVQACIVCQLTRDGLKRAGHCRHGQL 126
+LPQ + + + C L DG+K GHCRHG L
Sbjct: 114 VLPQVLRQCHAKEGCT---LKSDGIK--GHCRHGHL 144
>Z83107-1|CAB05506.2| 461|Caenorhabditis elegans Hypothetical
protein F32A7.3a protein.
Length = 461
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 233 LLPQFIEESGPVQACIVCQLTRDGLKRAGHCRHGQL 126
+LPQ + + + C L DG+K GHCRHG L
Sbjct: 219 VLPQVLRQCHAKEGCT---LKSDGIK--GHCRHGHL 249
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 107 ATGWQGAAVRGGSGPRV*GHPSSAGRQCRPGRD 205
++G QG A + G GP V GHP G RPG D
Sbjct: 249 SSGPQGKAGQPG-GPGVDGHPGRPGGSGRPGPD 280
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 28.7 bits (61), Expect = 3.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 106 CNWLARSSCPWRQWPARLRPSLV 174
C + S C W QW R+ PS +
Sbjct: 108 CWYTGSSDCDWTQWDTRMNPSKI 130
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 137 GGSGPRV*GHPSSAGRQCRPGRDRTP 214
G +GPR G P + GR PGRD +P
Sbjct: 173 GPTGPR--GSPGNKGRDGNPGRDGSP 196
>Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical
protein T11B7.3b protein.
Length = 273
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 107 ATGWQGAAVRGGSGPRV*GHPSSAGRQCRPGRDRTPQ*TEAEARRWGAHDG 259
A+G GAA + P + G P AG PG+D P A+ +R G
Sbjct: 164 ASGAPGAASQIHGKPGLPGPPGDAGAPGAPGQDGAPGHPGADGQRQRGQPG 214
>Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical
protein T11B7.3a protein.
Length = 297
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 107 ATGWQGAAVRGGSGPRV*GHPSSAGRQCRPGRDRTPQ*TEAEARRWGAHDG 259
A+G GAA + P + G P AG PG+D P A+ +R G
Sbjct: 164 ASGAPGAASQIHGKPGLPGPPGDAGAPGAPGQDGAPGHPGADGQRQRGQPG 214
>U00047-3|AAA50689.2| 225|Caenorhabditis elegans Hypothetical
protein ZK418.5 protein.
Length = 225
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 462 TRQWLITLLITDYDHLSRSRLHCLAFSIIRTPNVIII 572
T +W+ T L + D L L CL + I RTPN ++
Sbjct: 130 TWRWVQTSLDSSADLLVIVSLACLTWMITRTPNKFLV 166
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 342 VPPARPPLRFYQWMRPSRMSRAVKR 416
VPP R PL Y +PS S V R
Sbjct: 1085 VPPTRAPLTVYNQQKPSSSSMMVSR 1109
>AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical
protein W02D3.10b protein.
Length = 946
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 245 GAHDGVDVISG-EVVDNFAKCVWEPALVKLNAVSAACEATAQ 367
G VD G E+V +C+W+P K+ CE Q
Sbjct: 636 GLKKNVDQTVGLELVGIIKRCLWQPVKTKIALYDGICELATQ 677
>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
protein W02D3.10a protein.
Length = 1437
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 245 GAHDGVDVISG-EVVDNFAKCVWEPALVKLNAVSAACEATAQ 367
G VD G E+V +C+W+P K+ CE Q
Sbjct: 636 GLKKNVDQTVGLELVGIIKRCLWQPVKTKIALYDGICELATQ 677
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,483,921
Number of Sequences: 27780
Number of extensions: 285006
Number of successful extensions: 891
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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