Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20565
(695 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein. 71 4e-14
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 24 5.3
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 24 5.3
AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase p... 23 7.0
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 23 7.0
AY334000-1|AAR01125.1| 268|Anopheles gambiae FBN23 protein. 23 9.2
AY333999-1|AAR01124.1| 268|Anopheles gambiae FBN23 protein. 23 9.2
AY333998-1|AAR01123.1| 268|Anopheles gambiae FBN23 protein. 23 9.2
AY333997-1|AAR01122.1| 268|Anopheles gambiae FBN23 protein. 23 9.2
>L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein.
Length = 229
Score = 70.9 bits (166), Expect = 4e-14
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 70.9 bits (166), Expect = 4e-14
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 70.9 bits (166), Expect = 4e-14
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 69.7 bits (163), Expect = 8e-14
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVEPSDTIENVKAKIQDKEGIPP
Sbjct: 4 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 38
Score = 69.7 bits (163), Expect = 8e-14
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVEPSDTIENVKAKIQDKEGIPP
Sbjct: 80 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 114
Score = 69.7 bits (163), Expect = 8e-14
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVEPSDTIENVKAKIQDKEGIPP
Sbjct: 156 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 190
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 23.8 bits (49), Expect = 5.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 624 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 538
L GTY ++F +V L VV HHR
Sbjct: 293 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 321
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 23.8 bits (49), Expect = 5.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 624 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 538
L GTY ++F +V L VV HHR
Sbjct: 293 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 321
>AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 23.4 bits (48), Expect = 7.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 527 PAPHCSLCTRAADGGSYRSRRPCKT 453
P + TR++DG SY +R P +T
Sbjct: 268 PEAYFPKITRSSDGRSYPARHPNET 292
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.4 bits (48), Expect = 7.0
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -3
Query: 642 ASVPYRLEGTYLFVVVFEDHRAVTLPAVVTVLHHRHEHSGAALLAVH 502
+S+ +L T + V+ F DH+A+T+ + +R ++G L H
Sbjct: 207 SSLETQLRTTDMHVLSFSDHKALTVRLCLPTPPNRLTNNGYWQLRPH 253
>AY334000-1|AAR01125.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 9.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 670 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 578
Y+ +IH SRE L+ L + R + SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLAVSRAVLVRSC 140
>AY333999-1|AAR01124.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 9.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 670 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 578
Y+ +IH SRE L+ L + R + SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLTVSRAVLVRSC 140
>AY333998-1|AAR01123.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 9.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 670 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 578
Y+ +IH SRE L+ L + R + SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLAVSRAVLVRSC 140
>AY333997-1|AAR01122.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 9.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 670 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 578
Y+ +IH SRE L+ L + R + SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLAVSRAVLVRSC 140
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,628
Number of Sequences: 2352
Number of extensions: 14102
Number of successful extensions: 44
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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