Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20565
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 71 8e-13
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 71 8e-13
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 71 8e-13
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 71 8e-13
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 71 8e-13
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 68 6e-12
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 68 6e-12
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 64 1e-10
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 42 3e-04
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 37 0.012
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 36 0.037
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 3.2
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 3.2
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 29 3.2
Z83233-9|CAB05766.1| 405|Caenorhabditis elegans Hypothetical pr... 29 4.2
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 29 4.2
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 29 4.2
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 29 4.2
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 28 7.3
U58742-3|AAB36855.1| 262|Caenorhabditis elegans Helix loop heli... 28 7.3
U58742-2|AAB36858.1| 239|Caenorhabditis elegans Helix loop heli... 28 7.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 9.7
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 9.7
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 27 9.7
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 4 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 38
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 337 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 413 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 4 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 38
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 80 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 114
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 156 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 190
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 232 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 266
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 308 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 342
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 460 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 494
Score = 64.1 bits (149), Expect = 9e-11
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K L GKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 384 FVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPP 418
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 337 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 413 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 489 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 565 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 641 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 717 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 793 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 830
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 4 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 38
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 80 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 114
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 156 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 190
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 232 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 266
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 308 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 342
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 460 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 494
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 536 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 570
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 612 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 646
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 688 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 722
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 764 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 798
Score = 64.1 bits (149), Expect = 9e-11
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K L GKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 384 FVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPP 418
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 337 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 413 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 489 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 565 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 641 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 717 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQK+STLHLV
Sbjct: 793 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLV 830
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 4 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 38
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 80 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 114
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 156 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 190
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 232 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 266
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 308 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 342
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 384 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 418
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 460 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 494
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 536 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 570
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 612 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 646
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 688 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 722
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 764 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 798
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
F K LTGKTITLEVE SDTIENVKAKIQDKEGIPP
Sbjct: 4 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 38
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 68.1 bits (159), Expect = 6e-12
Identities = 37/91 (40%), Positives = 50/91 (54%)
Frame = +2
Query: 245 GNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXX 424
G P+ +QRL +AG+QLED SD I E+T+++ Y+TP
Sbjct: 33 GIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGGAKKRKKKVYTTPKKNKRK 88
Query: 425 XXXXXLAVLRFYKVDENGKIHRLRRECTASS 517
LAVL++YK+DENGKI RLR+EC S
Sbjct: 89 PKKVKLAVLKYYKIDENGKITRLRKECQQPS 119
Score = 44.8 bits (101), Expect = 6e-05
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +1
Query: 517 CGAGVFMAVMEDRHYCGKCHSTMV 588
CG GVFMA +RHYCG+CH T+V
Sbjct: 120 CGGGVFMAQHANRHYCGRCHDTLV 143
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 174 KTITLEVEPSDTIENVKAKIQDKEGIP 254
+T+ LEV ++ + ++K KI+ EGIP
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIP 35
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 68.1 bits (159), Expect = 6e-12
Identities = 37/91 (40%), Positives = 50/91 (54%)
Frame = +2
Query: 245 GNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXX 424
G P+ +QRL +AG+QLED SD I E+T+++ Y+TP
Sbjct: 33 GIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGGAKKRKKKVYTTPKKNKRK 88
Query: 425 XXXXXLAVLRFYKVDENGKIHRLRRECTASS 517
LAVL++YK+DENGKI RLR+EC S
Sbjct: 89 PKKVKLAVLKYYKIDENGKITRLRKECQQPS 119
Score = 44.8 bits (101), Expect = 6e-05
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +1
Query: 517 CGAGVFMAVMEDRHYCGKCHSTMV 588
CG GVFMA +RHYCG+CH T+V
Sbjct: 120 CGGGVFMAQHANRHYCGRCHDTLV 143
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 174 KTITLEVEPSDTIENVKAKIQDKEGIP 254
+T+ LEV ++ + ++K KI+ EGIP
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIP 35
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +3
Query: 153 FRKDLTGKTITLEVEPSDTIENVKAKIQDKEGIP 254
F K LTGKTITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 4 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +3
Query: 159 KDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
K LTGK I L++EP+D +E +K K+++KEGIPP
Sbjct: 6 KTLTGKEIELDIEPNDRVERIKEKVEEKEGIPP 38
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P QQRLIFAGKQ+ D +T +DY + S LHLV
Sbjct: 33 KEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +3
Query: 159 KDLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 257
K L GKTI + ++ +DT+E +K K+Q+K G+PP
Sbjct: 166 KTLFGKTIPISIKNTDTVETLKFKVQNKHGVPP 198
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +2
Query: 239 QRGNPSNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 352
+ G P +QQRLIF QLE+ R L YNI+ E +HLV
Sbjct: 193 KHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 159 KDLTGKTITLEVEPSDTIENVKAKIQDKEGI 251
K TGKTIT+E +NVK +++DK+G+
Sbjct: 64 KTSTGKTITVEAP-----KNVKTEVRDKQGV 89
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 293 EDGRTLSDYNIQKESTLHL 349
+D RT+SDYNI+ STL L
Sbjct: 135 KDQRTISDYNIKNGSTLRL 153
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 251 PSNQQRLIFAGKQLEDGRTLSDYNIQKESTL 343
P + L F+GK+LED ++ DYNIQK ST+
Sbjct: 189 PQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.037
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 171 GKTITLEVEPSDTIENVKAKIQDKEGIPPINRG*SLLESSWKMDV 305
G+T TL+ SDT+ +VKAKI +K I P + LL +W +D+
Sbjct: 111 GRTCTLDTSASDTMASVKAKIWEKLRILPNTQ--KLLLENWDLDL 153
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 266 RLIFAGKQLEDGRTLSDYNIQKESTLHL 349
R++ K LED TL+ YNIQ+ STL L
Sbjct: 214 RMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 29.9 bits (64), Expect = 1.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 488 RLRRECTASSAAPECSWR*W 547
R +EC + S AP+C+W W
Sbjct: 749 REEKECNSQSCAPQCAWNTW 768
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 356 STPGGGWIPSGYCSPRGYVHLPAAFQQ 276
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 356 STPGGGWIPSGYCSPRGYVHLPAAFQQ 276
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 356 STPGGGWIPSGYCSPRGYVHLPAAFQQ 276
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 356 STPGGGWIPSGYCSPRGYVHLPAAFQQ 276
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 356 STPGGGWIPSGYCSPRGYVHLPAAFQQ 276
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 356 STPGGGWIPSGYCSPRGYVHLPAAFQQ 276
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 356 STPGGGWIPSGYCSPRGYVHLPAAFQQ 276
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 356 STPGGGWIPSGYCSPRGYVHLPAAFQQ 276
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 356 STPGGGWIPSGYCSPRGYVHLPAAFQQ 276
S PGG +PSG +G +H+P A Q
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRASDQ 1376
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 99 KTMVYTRGTSVKESEDANFRK--DLTGKTITLEVEPSDTIENVKAKI 233
K + + T +K S F+ L GKT TL V SDT+E K ++
Sbjct: 25 KRCLQVKNTKMKNSSMPKFQYFVRLNGKTRTLNVNASDTVEQGKMQL 71
>Z83233-9|CAB05766.1| 405|Caenorhabditis elegans Hypothetical
protein K06B4.10 protein.
Length = 405
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 533 NTPAPHCSLCTRAADGGSYRSRRPCK 456
N P P+C +C+ ADG + C+
Sbjct: 17 NEPIPYCLICSEVADGNHFGVAAACR 42
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -3
Query: 693 APTLCQDFI*NPSYTAVASVPYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 547
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -3
Query: 693 APTLCQDFI*NPSYTAVASVPYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 547
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -3
Query: 693 APTLCQDFI*NPSYTAVASVPYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 547
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 266 RLIFAGKQLEDGRTLSDYNIQKESTLHL 349
R++ GK LED +L+ YNIQ+ + + L
Sbjct: 237 RMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>U58742-3|AAB36855.1| 262|Caenorhabditis elegans Helix loop helix
protein 28 protein.
Length = 262
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 223 KLKFKTKRESLQSTEVDLCWKAAGRWTY 306
K K KTKRE ++ ++ D+C+ G + +
Sbjct: 118 KQKVKTKREQIRRSKQDICYTELGNFVH 145
>U58742-2|AAB36858.1| 239|Caenorhabditis elegans Helix loop helix
protein 29 protein.
Length = 239
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 223 KLKFKTKRESLQSTEVDLCWKAAGRWTY 306
K K KTKRE ++ ++ D+C+ G + +
Sbjct: 95 KQKVKTKREQIRRSKQDICYTELGNFVH 122
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 283 SSKDQPLLIGGIPSLS*ILAFTFSMVSDGST-SRVMVLPVRSLRKFASSLSLTL 125
S K P I +P+ S I + TF+ + GST S V + SL +SSL T+
Sbjct: 1339 SFKTSPSSISPVPTSSPIPSTTFASSTSGSTISDVSSVSTTSLAPLSSSLPSTV 1392
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 269 LIFAGKQLEDGRTLSDYNIQKESTLHL 349
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 174 KTITLEVEPSDTIENVKAKIQDKEGIP 254
+T+ LEV ++ + ++K KI+ EGIP
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIP 35
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,859,536
Number of Sequences: 27780
Number of extensions: 291364
Number of successful extensions: 873
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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