Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20564
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    24   0.95 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    24   1.3  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    24   1.3  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    24   1.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    24   1.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.7  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   5.1  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   5.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.9  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.9  

>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 651 QRSFYLLHYSHHVRFTLSVVLLIRNGVF 568
           +   YL  Y+ HV  +  VV+ I +G F
Sbjct: 96  ENCLYLTIYTTHVNASFDVVVYIHSGAF 123


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 651 QRSFYLLHYSHHVRFTLSVVLLIRNGVF 568
           +   YL  Y+ HV  +  VV+ I  G F
Sbjct: 96  ENCLYLTIYTTHVNASFDVVVYIHGGAF 123


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 651 QRSFYLLHYSHHVRFTLSVVLLIRNGVF 568
           +   YL  Y+ HV  +  VV+ I  G F
Sbjct: 96  ENCLYLTIYTTHVNASFDVVVYIHGGAF 123


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 651 QRSFYLLHYSHHVRFTLSVVLLIRNGVF 568
           +   YL  Y+ HV  +  VV+ I  G F
Sbjct: 96  ENCLYLTIYTTHVNASFDVVVYIHGGAF 123


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 651 QRSFYLLHYSHHVRFTLSVVLLIRNGVF 568
           +   YL  Y+ HV  +  VV+ I  G F
Sbjct: 96  ENCLYLTIYTTHVNASFDVVVYIHGGAF 123


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 108 NLFLMFAQTLDHLLEVLVTLVGSCG 34
           NL+L     +  L++  +TLV  CG
Sbjct: 266 NLYLKHKLEISSLVQTAITLVAMCG 290


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 17/42 (40%), Positives = 18/42 (42%)
 Frame = -1

Query: 259 RTPPV*YYGCVVSLSAQLQ*ADVGRRPAAASPGWRSRAAGTS 134
           RTP        VSLS          RP  AS G R+R A TS
Sbjct: 53  RTPQFEPQQFEVSLSENRSHEPEMERPKGASNGKRARTAYTS 94


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 17/42 (40%), Positives = 18/42 (42%)
 Frame = -1

Query: 259 RTPPV*YYGCVVSLSAQLQ*ADVGRRPAAASPGWRSRAAGTS 134
           RTP        VSLS          RP  AS G R+R A TS
Sbjct: 73  RTPQFEPQQFEVSLSENRSHEPEMERPKGASNGKRARTAYTS 114


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 181 PAAASPGWRSRAAGTSPGYR 122
           P+ +SP   S +A TSP  R
Sbjct: 40  PSGSSPQHSSSSASTSPAAR 59


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 181 PAAASPGWRSRAAGTSPGYR 122
           P+ +SP   S +A TSP  R
Sbjct: 40  PSGSSPQHSSSSASTSPAAR 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,065
Number of Sequences: 336
Number of extensions: 1594
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)