Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20564
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 32 0.063
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 30 0.25
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 30 0.25
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 30 0.34
SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.44
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.44
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 0.59
SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ... 29 0.77
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.77
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.77
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 28 1.4
SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase... 27 1.8
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 27 1.8
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 27 2.4
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 4.1
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 26 4.1
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 5.5
SPCC970.09 |sec8||exocyst complex subunit Sec8|Schizosaccharomyc... 25 7.2
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 25 7.2
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 25 7.2
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 25 7.2
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 25 9.5
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 25 9.5
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 32.3 bits (70), Expect = 0.063
Identities = 16/74 (21%), Positives = 39/74 (52%)
Frame = +1
Query: 67 KKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIK 246
+K +++ R EE++R+ A ++ ++ + QEK + ++ + ++ EKL I+
Sbjct: 77 EKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIR 136
Query: 247 LAESARPRPLKSRR 288
L E R + + ++
Sbjct: 137 LQEQQRRKEERDQK 150
Score = 31.1 bits (67), Expect = 0.15
Identities = 20/87 (22%), Positives = 44/87 (50%)
Frame = +1
Query: 46 DKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREK 225
+K+ + + ER+R+ E + K Q++ Q+ + QEK+ AA + +E ++E+
Sbjct: 77 EKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKI--AAKKMKELEKLEKER 134
Query: 226 LRNHNIKLAESARPRPLKSRRSLKTLR 306
+R + + R + L+ + + LR
Sbjct: 135 IRLQEQQRRKEERDQKLREKEEAQRLR 161
Score = 29.5 bits (63), Expect = 0.44
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +1
Query: 4 EVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQA 183
E K + ++ AA K E K ER+R E+Q RK +E+ Q+L +E+ Q+
Sbjct: 108 EQEKKLREQEKIAAKKMKELEKLEKERIRLQEQQRRK-----EERDQKLRE--KEEAQRL 160
Query: 184 ADRRLLIEAEQREKLRNHNIKLAE 255
++L + Q+ KL N K E
Sbjct: 161 RQEQILNKERQQLKLNNFFTKGVE 184
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 30.3 bits (65), Expect = 0.25
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 13 KAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQ-LESAIQEKLQQAAD 189
K ++ ++R +KKM E+ E++ ++ ++KF + LE A + AD
Sbjct: 134 KKSRNRQKERLERRKAEMKKMSEQAELESEKMADLKNEEKKKFSKILEEAGLVAVDIPAD 193
Query: 190 RRLLIEAEQREKLRNHNIKLAESA 261
L + + +HN+KL A
Sbjct: 194 GNCLFASISHQLNYHHNVKLNSQA 217
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 49 KRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 228
K +E L K E +E + ++ +R +E ++ + A+Q+K+ Q A +R+KL
Sbjct: 24 KMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQMEADLSQKHATERQKL 83
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 30.3 bits (65), Expect = 0.25
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Frame = +1
Query: 22 EDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLL 201
E + A +++ N K + + E + +RK++ +Q + + L+ Q+K + A R+ +
Sbjct: 61 EKERILALEEKKTNYKILQKSNDETAQAMRKMQ--DQARLRDLQKIRQQKAEDAEQRKKI 118
Query: 202 IEAEQREKLR------NHNIKLAESARP--RPLKSRRSLKTLRT 309
+ +R+K R N N + E+A P +P + S RT
Sbjct: 119 LAEIERDKKRRAAERENKNSSVKETAAPIKQPKNANSSSTCTRT 162
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 29.9 bits (64), Expect = 0.34
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 4 EVYKAIED-KMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQ 144
E+ KA+E+ K+T DENLKK I+ L E+ +K+ G QE+++
Sbjct: 35 ELVKALENVKLTKFTGDGDENLKKNIKVLVPVNEKPQKL-DGKQEEYE 81
>SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 433
Score = 29.5 bits (63), Expect = 0.44
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 52 RDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRL---LIEAEQRE 222
+D +L+ +E L + E +++ + + +E A QE LQQ R+ L E EQ
Sbjct: 19 QDHSLQMALEELNQQIEVIQRQEEQLALRKKAIEDARQEVLQQIQHRKFRQYLHEREQEA 78
Query: 223 KLRNHNIKLAESAR 264
+L+ + ++ + R
Sbjct: 79 RLQEYYLEQLQERR 92
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.5 bits (63), Expect = 0.44
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +1
Query: 49 KRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 228
++DE K+ ++ R+ EQV + +EK+ +LE + +LQ A R ++A+ +
Sbjct: 436 EKDEASKERLKAARKEAEQVEEETRPIREKY-ELEKSRGSELQDAKRRLDELKAKAEDAE 494
Query: 229 RNHNIKLA 252
R ++ LA
Sbjct: 495 RRNDFTLA 502
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 29.1 bits (62), Expect = 0.59
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 163 QEKLQQAADRRLLIEAEQREKLRNHNIKLAESARPR 270
Q+K +A + + L + EQR +L H +L E+ RPR
Sbjct: 207 QQKKLRAKEMQELADEEQRRRLAAHRKELHEANRPR 242
>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 507
Score = 28.7 bits (61), Expect = 0.77
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 22 EDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLL 201
E++ A + +KK I+ + E+ + KV +E ++L+ I+E ++ +RR
Sbjct: 409 EERRNPARVNQALKIKKPID-MEEYSKVSGKVFRPVEEMEKELQK-IRENFEE--ERRRA 464
Query: 202 IE-AEQREKLRNHNIKLAESARPRP 273
IE AEQR+ + NH ++ ++A P P
Sbjct: 465 IEVAEQRQLIVNHELEQEKNA-PSP 488
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 28.7 bits (61), Expect = 0.77
Identities = 20/105 (19%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = +1
Query: 1 AEVYKAIEDKMTTAADKRDEN---LKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEK 171
AE + + K + ++ N L+KM+E R EE+ +++R + + + E + E
Sbjct: 226 AENDSSAKGKQAAGSKRKGPNVTALQKMLEEKRAREEEEQRIRE-EEARIAEEEKRLAE- 283
Query: 172 LQQAADRRLLIEAEQREKLRNHNIKLAESARPRPLKSRRSLKTLR 306
+++A ++ +++E+ + +K + K +++L R
Sbjct: 284 VEEARKEEARLKKKEKERKKKEEMKAQGKYLSKKQKEQQALAQRR 328
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 28.7 bits (61), Expect = 0.77
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +1
Query: 7 VYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAA 186
+Y+A+ +K A K E + K E RE E + + FQ + +EK+ Q
Sbjct: 343 IYEALYEKFLKAC-KDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEKIIQEK 401
Query: 187 DRRLLIEAEQREKL 228
R + E R+KL
Sbjct: 402 SRVDKMIDEYRQKL 415
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 97 EEQVRKVRAGNQEKFQQLESAIQEK 171
EE+ R ++A NQ +QLE AIQE+
Sbjct: 374 EEERRALKADNQTLQKQLEKAIQER 398
>SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase
Cmk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 240 Y*TGGVRSAAT-AKVEEITKDIENKLTTAELNREKEIQKKLDFVK 371
Y G V T A V E NK+ A++ +K ++KK DFVK
Sbjct: 31 YRVGRVLGGGTYATVREAVHIETNKMYAAKIMNKKMMEKKQDFVK 75
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 27.5 bits (58), Expect = 1.8
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 100 EQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAESAR---PR 270
EQ+RK + + + E Q KLQ+ + R E EQR + ++A S R R
Sbjct: 26 EQLRKAQIREKAREITEERNRQRKLQRERELRQKYEEEQRRQQAMEAKRIAASTRQTSER 85
Query: 271 PLKSRRSLKTLR 306
P S K +R
Sbjct: 86 PPLSAEEAKRIR 97
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -2
Query: 636 LLHYSHHVRFTLSVVLLIRNGVFHGFSVNVSNLTVDVGGRVTESNLTVVT 487
L +Y + VR S V I+ HG ++ S L + +G VT +L +VT
Sbjct: 485 LSNYENPVRRVRSFVAEIQTFDIHGPILSGSTLVLHLGRTVTSVSLKIVT 534
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 26.2 bits (55), Expect = 4.1
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +1
Query: 13 KAIEDKMTTAADKRDENLKKMIERL--REHEEQVRKV--RAGNQEKFQQLESAIQEKLQQ 180
KA + A + +EN K+ E RE EE+ ++ +E ++ + +EK ++
Sbjct: 584 KAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKR 643
Query: 181 AADRRLLIEAEQREK 225
A+ + EAE++ K
Sbjct: 644 EAEEKAKREAEEKAK 658
Score = 25.0 bits (52), Expect = 9.5
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 22 EDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGN--QEKFQQLESAIQEKLQQAADRR 195
+D + A +R + K E R+ EE+ R N +E +Q + +EK ++ A+ +
Sbjct: 526 KDAIKLAIQQRIQE-KAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEK 584
Query: 196 LLIEAEQREK 225
EAE++ K
Sbjct: 585 AKREAEEKAK 594
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -3
Query: 323 GSGQFVLNVFSDLLDFSGRGRADSASLILWLRSF 222
GS +LN F DF G+ R D A L L L+SF
Sbjct: 607 GSNSHILNAFISAFDFKGK-RIDEA-LRLLLQSF 638
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.8 bits (54), Expect = 5.5
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = +1
Query: 64 LKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNI 243
L + E+L + E+ K++ E +++++ E +QA+++ L E E+ EKL +
Sbjct: 210 LLTVTEKLDKKEKDYEKIK----EDVSSIKASLAE--EQASNKSLRGEQERLEKLLVSSN 263
Query: 244 KLAESARPRPLKSRRSLKTLR 306
K + R R KTL+
Sbjct: 264 KTVSTLRQTENSLRAECKTLQ 284
>SPCC970.09 |sec8||exocyst complex subunit Sec8|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1088
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 440 LLRLERGPPTHASHAHVTTVRFDSVTRPPTS--TVRFDT 550
+ +LE P HAS +H +++ SV PTS +FDT
Sbjct: 422 MTKLETKTPKHASSSHKSSIM--SVNSDPTSPKVSKFDT 458
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 10 YKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRA 123
++A E+KM D + L + ER+R E Q+ +++
Sbjct: 335 FQAKEEKMIETRDALNSELSEYHERIRALETQIESLKS 372
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 294 KDIENKLTTAELNREKEIQKKLDFV 368
K I+N +TT E + ++ +Q +DFV
Sbjct: 269 KRIKNLITTTEDSLQQSVQSNIDFV 293
>SPBC577.05c |rec27|mug41|meiotic recombination protein
Rec27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 130 QEKFQQLESAIQEKLQQAADRRLLIEAEQRE---KLRNHNIKLAESAR 264
Q+K ++ E +++Q + +L IEA +++ ++RN ++ AE R
Sbjct: 72 QQKIKEFEIQKANQIKQLNEEKLSIEARKQQLEIEIRNQLLQYAEKLR 119
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 252 GVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLDF-VKXXERRAELVRQN 407
G ++ T + DI L + L +EK+I KKL F K E + + RQN
Sbjct: 513 GAKNIQTGSIFWTFDDIIG-LKDSRLKKEKKIPKKLPFWKKYLELQLTMFRQN 564
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 19 IEDKMTTAADKRDENLKKMIERLREHEEQ 105
I D+ ++K DE L+ + ERLRE EE+
Sbjct: 178 IMDETIQKSEKIDELLQYIEERLRELEEE 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,865,918
Number of Sequences: 5004
Number of extensions: 27378
Number of successful extensions: 153
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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