Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20564
(655 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 38 0.004
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 33 0.22
At1g79110.1 68414.m09224 expressed protein 33 0.22
At3g25680.1 68416.m03196 expressed protein 32 0.29
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 32 0.29
At3g06020.1 68416.m00687 expressed protein ; expression supporte... 31 0.51
At5g25870.1 68418.m03069 hypothetical protein 31 0.67
At4g23800.1 68417.m03422 high mobility group (HMG1/2) family pro... 31 0.67
At4g11100.1 68417.m01802 expressed protein 31 0.67
At4g09930.1 68417.m01626 avirulence-responsive family protein / ... 30 1.2
At2g22610.1 68415.m02680 kinesin motor protein-related 30 1.2
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 29 2.0
At1g79110.2 68414.m09225 expressed protein 29 2.0
At5g58320.2 68418.m07301 kinase interacting protein-related low ... 29 2.7
At5g58320.1 68418.m07300 kinase interacting protein-related low ... 29 2.7
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 29 2.7
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 29 2.7
At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-contain... 29 2.7
At3g50370.1 68416.m05508 expressed protein 29 3.6
At2g21150.1 68415.m02509 XAP5 family protein contains Pfam profi... 29 3.6
At1g45976.1 68414.m05206 expressed protein 29 3.6
At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identica... 28 4.7
At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identica... 28 4.7
At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identica... 28 4.7
At2g40620.1 68415.m05010 bZIP transcription factor family protei... 28 4.7
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 28 4.7
At1g80530.1 68414.m09439 nodulin family protein similar to nodul... 28 4.7
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 28 4.7
At5g16210.1 68418.m01894 HEAT repeat-containing protein contains... 28 6.2
At5g03680.1 68418.m00327 trihelix DNA-binding protein, putative ... 28 6.2
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 28 6.2
At1g72250.1 68414.m08353 kinesin motor protein-related 28 6.2
At1g17360.1 68414.m02116 COP1-interacting protein-related simila... 28 6.2
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 27 8.2
At3g28770.1 68416.m03591 expressed protein 27 8.2
At3g24690.1 68416.m03100 expressed protein similar to hypothetic... 27 8.2
At1g18750.1 68414.m02338 MADS-box protein (AGL65) similar to hom... 27 8.2
At1g03080.1 68414.m00282 kinase interacting family protein simil... 27 8.2
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/72 (30%), Positives = 41/72 (56%)
Frame = +1
Query: 49 KRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 228
+++EN KK+ E + E++ R + A + ++E ++E L+Q R L EA++RE+L
Sbjct: 823 EKEENKKKLREAIELEEKEKRLIEAFER---AEIERRLKEDLEQEEMRMRLQEAKERERL 879
Query: 229 RNHNIKLAESAR 264
N + E+ R
Sbjct: 880 HRENQEHQENER 891
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 49 KRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 228
K + L+ ++ E EE+ R++R + Q+ E I+E ++ + R + EA ++ +L
Sbjct: 704 KEQQELELQLKEAFEKEEENRRMREAFALE-QEKERRIKEAREKEENERRIKEAREKAEL 762
Query: 229 RNH-NIKLAESARPRPLKSRR 288
L + + R +K R+
Sbjct: 763 EQRLKATLEQEEKERQIKERQ 783
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +1
Query: 22 EDKMTTAADKRDENLKKMIERLREHE-EQVRKVRAGNQEKFQQLESAIQEKLQQAADRRL 198
+++ A +++EN +++ E + E EQ K +EK +Q++ + + + + +
Sbjct: 736 KERRIKEAREKEENERRIKEAREKAELEQRLKATLEQEEKERQIKERQEREENERRAKEV 795
Query: 199 LIEAEQREKLRNHNIKLAESARPRPLKSRR 288
L +AE KL+ L + R LK R
Sbjct: 796 LEQAENERKLKE---ALEQKENERRLKETR 822
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +1
Query: 28 KMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAAD 189
+M + ++ ++K +ER +E E+ + + QEK ++ E+ +EKL Q D
Sbjct: 499 EMLDLFENQNIQMQKEVERFKEMVEESSRFQTQMQEKMKEAENDYEEKLLQVCD 552
>At1g79110.1 68414.m09224 expressed protein
Length = 358
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/73 (24%), Positives = 38/73 (52%)
Frame = +1
Query: 94 HEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAESARPRP 273
H Q+ +V+ +EK ++ I E ++Q +RL ++ E+RE++ N L E +
Sbjct: 163 HLYQMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEERVKSLS 222
Query: 274 LKSRRSLKTLRTN 312
++++ +TN
Sbjct: 223 IENQIWRDLAQTN 235
>At3g25680.1 68416.m03196 expressed protein
Length = 558
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 4 EVYKAIEDKMTTAADKRDENLKKMIERLREHEEQV---RKVRAGNQEKFQQLESAIQEKL 174
E + A K A D + + L + E + E +++ + V K Q++ S +Q KL
Sbjct: 448 EKWSAERLKEKAAIDCQKQLLNSLTEEIDEMSQRLISDKSVYLTEHSKLQEMLSDLQSKL 507
Query: 175 QQAADRRLLIEAE 213
+ D+R ++EAE
Sbjct: 508 ESLIDKRSILEAE 520
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 32.3 bits (70), Expect = 0.29
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +1
Query: 4 EVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQA 183
E K +E+ + ++ ++ K +E L EE +++ N+E QLE + L +A
Sbjct: 85 ETVKRVEEAIRKKVEESLQSEKIKMEILTLLEEGRKRL---NEEVAAQLEEEKEASLIEA 141
Query: 184 ADR--RLLIEAEQREKLRNHNIKLAESARPRPLKSRR 288
++ R E E+RE++ N+K E A+ + R+
Sbjct: 142 KEKEEREQQEKEERERIAEENLKRVEEAQRKEAMERQ 178
>At3g06020.1 68416.m00687 expressed protein ; expression supported
by MPSS
Length = 300
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/64 (23%), Positives = 39/64 (60%)
Frame = +1
Query: 34 TTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAE 213
T ++++E ++ IE +R++EE++ + + +EK ++++ EK+Q++ R IE +
Sbjct: 227 TETKEEKEEEEEETIETVRDNEEEIPEYKEEEEEKEEEIKVKGVEKVQRS---RRCIEGD 283
Query: 214 QREK 225
+ +
Sbjct: 284 RENR 287
>At5g25870.1 68418.m03069 hypothetical protein
Length = 173
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +1
Query: 13 KAIEDKMTTAADKRDEN---LKKMIERLREHEEQVRKVRAGNQEKFQQLE 153
K +ED+M A DE+ LKK +++E E+++RK N E ++L+
Sbjct: 122 KELEDRMIKAGQINDEHERELKKKCSKIKELEDRIRKEGQINNEHERELK 171
>At4g23800.1 68417.m03422 high mobility group (HMG1/2) family
protein similar to HMG2B [Homo sapiens] GI:32335;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 456
Score = 31.1 bits (67), Expect = 0.67
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Frame = +1
Query: 25 DKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQ------QLESAIQEKLQQAA 186
+KM DK +E LK+ E LR+ EE++ + R QEK + Q + + A
Sbjct: 56 EKMKIEKDKTEELLKEKDEILRKKEEEL-ETRDAEQEKLKVELKKLQKMKEFKPNMTFAC 114
Query: 187 DRRLLIEAEQREKLRNHNIKLAESARP 267
+ L +AEQ + + E+ RP
Sbjct: 115 GQSSLTQAEQEKANKKKKKDCPETKRP 141
>At4g11100.1 68417.m01802 expressed protein
Length = 287
Score = 31.1 bits (67), Expect = 0.67
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = +1
Query: 4 EVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLES---AIQEKL 174
E Y+AI+ A + + + K+++E + + KVR +E + +ES AI ++L
Sbjct: 39 EAYEAIKLHHENKAKELEVSNKRLLEECMKERREKAKVRKTFEEMKKTMESERTAIVDEL 98
Query: 175 QQAADRRLL---IEAEQREKLRNHNIKLAE 255
+ LL E E+ K+ N ++LAE
Sbjct: 99 KSKNQELLLGKKKEEEELVKMENKYVELAE 128
>At4g09930.1 68417.m01626 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains
Pfam PF04548: AIG1 family;
Length = 335
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 303 ENKLTTAELNREKEIQKKLDFVKXXERR 386
EN+L T++ + K++QK LD V+ ER+
Sbjct: 189 ENRLRTSKRKKAKQVQKLLDLVEEVERK 216
>At2g22610.1 68415.m02680 kinesin motor protein-related
Length = 1093
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/76 (23%), Positives = 39/76 (51%)
Frame = +1
Query: 13 KAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADR 192
KA+ +K + +DE++KKM E ++ E + K R + Q+ +Q +L ++
Sbjct: 767 KAMVEKARQESRSKDESIKKMEENIQNLEGK-NKGRDNSYRSLQEKNKDLQNQLDSVHNQ 825
Query: 193 RLLIEAEQREKLRNHN 240
A+ +E+L++ +
Sbjct: 826 SEKQYAQLQERLKSRD 841
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 43 ADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAE 213
A + E L+ +E + H Q + + N+ +Q+ESA + +A R+ +EAE
Sbjct: 970 AKEEIEKLRGEVESSKSHMLQYKSIAQVNETALKQMESAHENFRLEAEKRQRSLEAE 1026
>At1g79110.2 68414.m09225 expressed protein
Length = 355
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +1
Query: 106 VRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAESARPRPLKSR 285
+ +V+ +EK ++ I E ++Q +RL ++ E+RE++ N L E + ++++
Sbjct: 164 MERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEERVKSLSIENQ 223
Query: 286 RSLKTLRTN 312
+TN
Sbjct: 224 IWRDLAQTN 232
>At5g58320.2 68418.m07301 kinase interacting protein-related low
similarity to kinase interacting protein 1 [Petunia
integrifolia] GI:13936326
Length = 558
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +1
Query: 1 AEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQ 180
A++ K +E+K+ RD+ K++ +R E++ RKV E+ ++L+S I+ +
Sbjct: 408 ADIAKLLEEKI-----HRDDQFKELEANVRYLEDERRKVNNEKIEEEEKLKSEIEVLTLE 462
Query: 181 AADRRLLIEAEQRE 222
++ IE R+
Sbjct: 463 KVEKGRCIETLSRK 476
>At5g58320.1 68418.m07300 kinase interacting protein-related low
similarity to kinase interacting protein 1 [Petunia
integrifolia] GI:13936326
Length = 490
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +1
Query: 1 AEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQ 180
A++ K +E+K+ RD+ K++ +R E++ RKV E+ ++L+S I+ +
Sbjct: 408 ADIAKLLEEKI-----HRDDQFKELEANVRYLEDERRKVNNEKIEEEEKLKSEIEVLTLE 462
Query: 181 AADRRLLIEAEQRE 222
++ IE R+
Sbjct: 463 KVEKGRCIETLSRK 476
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +1
Query: 40 AADKR-DENLKKMIERLREHEEQVRK-VRAGNQEKFQQLESAIQEKLQQAADRRLLIEAE 213
A +KR L+K R+ EEQ+RK + ++E+ ++ E ++EK Q + R L E +
Sbjct: 341 AHEKRIRRELEKQDMLRRKREEQIRKEMERQDRERRKEEERLLREK--QREEERYLKE-Q 397
Query: 214 QREKLRNHNIKLAESARPRPLKSRRSLK 297
RE R E+ R ++ + ++
Sbjct: 398 MRELQRREKFLKKETIRAEKMRQKEEMR 425
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 29.1 bits (62), Expect = 2.7
Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Frame = +1
Query: 31 MTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQE-----KLQQAADRR 195
+ T K+ E+L+ +RL EE+V K ++ +LE+ +E K +Q A R
Sbjct: 378 LETTVAKQKEDLEVSEQRLGSVEEEVSKNEKEVEKLKSELETVKEEKNRALKKEQDATSR 437
Query: 196 LLIEAEQREKLRNHNIKLAESARPRPLKSRRSLKTL 303
+ +E++ KL + ES++ KS++++++L
Sbjct: 438 VQRLSEEKSKL----LSDLESSKEEEEKSKKAMESL 469
>At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-containing
protein-related / RhoGAP domain-containing protein
contains Pfam domain, PF00620: RhoGAP domain
Length = 902
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 100 EQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIE 207
E+ +K G ++ +Q +QE+LQQ DR+L +E
Sbjct: 613 ERRKKALYGRRQALEQDVGRLQEQLQQERDRKLALE 648
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 55 DENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRN 234
DENLKK ++ + + E + K+ + K LE+ + +A+ E R KL
Sbjct: 665 DENLKKDLQEVAQAEADIAKL----EHKVDDLENRLGHHDGKASGSTHSASKESR-KLPE 719
Query: 235 HNIKLAESAR 264
HN K+ E +
Sbjct: 720 HNAKMKEKQK 729
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 28.7 bits (61), Expect = 3.6
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 28 KMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAA----DRR 195
K T D E+ + +ER+++ +E+ R+ QE+ +L +E+ + A +R+
Sbjct: 457 KQTEFHDPVRESFEAELERVQKMQEEERRRIIEEQERVIELARTEEEERLRLAREQDERQ 516
Query: 196 LLIEAEQRE-KLRNHNIKLAESARPRPLKSRR 288
+E E RE RN +L + R L+ +
Sbjct: 517 RRLEEEAREAAFRNEQERLEATRRAEELRKSK 548
>At2g21150.1 68415.m02509 XAP5 family protein contains Pfam profile:
PF04921 XAP5 protein
Length = 337
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 34 TTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAE 213
T++ + D KK L EE V K R + KF++ E +KLQQ + L +
Sbjct: 53 TSSCEILDTAFKKETVGLVTREEYVEK-RVNIRNKFEEEEKEKLQKLQQEEEELQLEKRN 111
Query: 214 QREKLR 231
++ K++
Sbjct: 112 KKRKIK 117
>At1g45976.1 68414.m05206 expressed protein
Length = 325
Score = 28.7 bits (61), Expect = 3.6
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 16 AIEDKMTTAADKRDENLK-KMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADR 192
AI DK+ K ++ K++++LRE +E++ ++ N+E ++E E +A +
Sbjct: 164 AILDKIKRGQQKTVSLMEEKVVQKLREKDEELERINRKNKELEVRMEQLTME--AEAWQQ 221
Query: 193 RLLIEAEQREKLRNHNIKLAESARPR 270
R L N+N+ A+ RPR
Sbjct: 222 RAKYNENMIAAL-NYNLDRAQ-GRPR 245
>At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1150
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/92 (20%), Positives = 45/92 (48%)
Frame = +1
Query: 52 RDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLR 231
+ + L++++ H++Q + + Q++ Q L+ Q + QQ ++ +Q++ L+
Sbjct: 502 QQQQLQQLLHSSLNHQQQQSQSQQQQQQQ-QLLQQQQQLQSQQHSNNNQSQSQQQQQLLQ 560
Query: 232 NHNIKLAESARPRPLKSRRSLKTLRTN*PLPS 327
+ + +PL+ + + LRT PL S
Sbjct: 561 QQQQQQLQQQHQQPLQQQTQQQQLRTQ-PLQS 591
>At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1164
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/92 (20%), Positives = 45/92 (48%)
Frame = +1
Query: 52 RDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLR 231
+ + L++++ H++Q + + Q++ Q L+ Q + QQ ++ +Q++ L+
Sbjct: 501 QQQQLQQLLHSSLNHQQQQSQSQQQQQQQ-QLLQQQQQLQSQQHSNNNQSQSQQQQQLLQ 559
Query: 232 NHNIKLAESARPRPLKSRRSLKTLRTN*PLPS 327
+ + +PL+ + + LRT PL S
Sbjct: 560 QQQQQQLQQQHQQPLQQQTQQQQLRTQ-PLQS 590
>At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1165
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/92 (20%), Positives = 45/92 (48%)
Frame = +1
Query: 52 RDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLR 231
+ + L++++ H++Q + + Q++ Q L+ Q + QQ ++ +Q++ L+
Sbjct: 502 QQQQLQQLLHSSLNHQQQQSQSQQQQQQQ-QLLQQQQQLQSQQHSNNNQSQSQQQQQLLQ 560
Query: 232 NHNIKLAESARPRPLKSRRSLKTLRTN*PLPS 327
+ + +PL+ + + LRT PL S
Sbjct: 561 QQQQQQLQQQHQQPLQQQTQQQQLRTQ-PLQS 591
>At2g40620.1 68415.m05010 bZIP transcription factor family protein
identical to b-Zip DNA binding protein GI:2246376 from
[Arabidopsis thaliana]; contains a bZIP transcription
factor basic domain signature (PDOC00036)
Length = 367
Score = 28.3 bits (60), Expect = 4.7
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Frame = +1
Query: 19 IEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGN------QEKFQQLESAIQEKLQQ 180
+ ++ D +E LKK +ERL+ +V A N Q + Q +S Q QQ
Sbjct: 217 VMEQQAKLRDALNEQLKKEVERLKFATGEVSPADAYNLGMAHMQYQQQPQQSFFQHHHQQ 276
Query: 181 AADRRLLIEAEQREKLRNHNIKLAESARPRPLKSRRSLKTLRTN*PLPS 327
D + L + + L N +S+R P + + + +N P S
Sbjct: 277 QTDAQNLQQMTHQFHLFQPNNNQNQSSRTNPPTAHQLMHHATSNAPAQS 325
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/87 (21%), Positives = 41/87 (47%)
Frame = +1
Query: 28 KMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIE 207
K+ ++R ++ IER R+ EE+ RK +E ++ E + + ++ +R+ E
Sbjct: 427 KLMREIEERKRREEEEIERRRKEEEEARK----REEAKRREEEEAKRREEEETERKKREE 482
Query: 208 AEQREKLRNHNIKLAESARPRPLKSRR 288
E R++ + E+ R + +R
Sbjct: 483 EEARKREEERKREEEEAKRREEERKKR 509
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 49 KRDENLKKMIERLRE--HEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQRE 222
KR+E +K E + + EE+ RK R + K ++ E+ +E+ ++ + E+R
Sbjct: 627 KREEEARKREEEMAKIREEERQRKEREDVERKRREEEAMRREEERKREEEAAKRAEEERR 686
Query: 223 KLRNHNIKLAESARPRP 273
K K +P+P
Sbjct: 687 KKEEEEEKRRWPPQPKP 703
>At1g80530.1 68414.m09439 nodulin family protein similar to
nodulin-like protein [Arabidopsis thaliana] GI:3329368,
nodule-specific protein Nlj70 [Lotus japonicus]
GI:3329366
Length = 561
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 102 FLMFAQTLDHLLEVLVTLVGSC 37
FL+FA +DH + V L+G C
Sbjct: 428 FLLFAMAIDHTIYVATALIGIC 449
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/80 (23%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 AEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQ 180
+E K + ++ TT K +E L ++ E L + +++ V N+E ++ E+A +K+++
Sbjct: 830 SEENKELRERETTLLKKAEE-LSELNESLVDKASKLQTVVQENEE-LRERETAYLKKIEE 887
Query: 181 AAD-RRLLIEAEQREKLRNH 237
+ +L + E + ++ NH
Sbjct: 888 LSKLHEILSDQETKLQISNH 907
>At5g16210.1 68418.m01894 HEAT repeat-containing protein contains
Pfam profile PF02985: HEAT repeat
Length = 1180
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +1
Query: 13 KAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEK---FQQLESAIQEKLQQA 183
+A E+K+ A + +E+LKK IERL + ++ + K + +E+ F + ++Q+ L+
Sbjct: 210 EAAEEKI--AMLQENESLKKEIERLSKEKDGLLKSKENFEEQIGAFNKSTESLQKDLRDR 267
Query: 184 ADRRLLIEAEQREKLRNHNIKLAE 255
+ ++ + RN N AE
Sbjct: 268 EKQVQSLKQSSEHQRRNLNDCRAE 291
>At5g03680.1 68418.m00327 trihelix DNA-binding protein, putative
similar to DNA-binding protein DF1 [Pisum sativum]
GI:13646986
Length = 591
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = +1
Query: 55 DENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRN 234
D N+K++IER E++ KV +E+ E ++ D+ L A++R ++
Sbjct: 299 DTNMKRLIERQDVWLEKLTKVIEDKEEQRMMKEEEWRKIEAARIDKEHLFWAKERARMEA 358
Query: 235 HNIKLAES 258
++ + E+
Sbjct: 359 RDVAVIEA 366
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +1
Query: 22 EDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLL 201
E K D + + ++LRE E ++RK + ++ +++ I+ K ++ + LL
Sbjct: 551 ELKAAQRGDDHEMKARDEEDKLRERERELRKRKEREVQEVERVRQKIRRKEASSSYQALL 610
Query: 202 IE 207
+E
Sbjct: 611 VE 612
>At1g72250.1 68414.m08353 kinesin motor protein-related
Length = 1195
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Frame = +1
Query: 10 YKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGN---QEKFQQLES--AIQEKL 174
YK + +K +DE ++KM E + E ++++ N Q+K ++LES ++ KL
Sbjct: 834 YKQMVEKWKQDMKGKDEQIRKMEETMYGLEAKIKERDTKNKTLQDKVKELESQLLVERKL 893
Query: 175 -QQAADRRLLIEAEQREK 225
+Q D ++ AEQ+ K
Sbjct: 894 ARQHVDTKI---AEQQTK 908
>At1g17360.1 68414.m02116 COP1-interacting protein-related similar
to COP1-Interacting Protein 7 (CIP7) (GI:3327870)
[Arabidopsis thaliana]
Length = 1032
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +1
Query: 55 DENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRR--LLIEAEQR-EK 225
+E +KK +LRE QE Q + ++ K A+ +R + QR EK
Sbjct: 557 EEYMKKRDAKLREEWSSKESKLKSMQEALDQSRTEMKAKFSAASMKRQDSISSTRQRAEK 616
Query: 226 LRNHNIKLAESARPRPLKSRRS 291
R+ N + + P+ S +S
Sbjct: 617 FRSFNSRTSSKKYQHPISSLQS 638
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +1
Query: 22 EDKMTTAADKRDENLKKMIERLREHEEQ 105
++KM +K+DE +KK+ ++RE E++
Sbjct: 1222 KEKMNKEIEKKDEEIKKLGGKVREDEKE 1249
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +1
Query: 49 KRDENLKKMIERLR-EHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREK 225
K D+N KK + ++ +E +K + N+EK + E + + D++ ++ ++K
Sbjct: 1132 KEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQK 1191
Query: 226 LRNHNIKLAESARPRPLKSRRSLKT 300
+ +K +E + + + R +T
Sbjct: 1192 KKEKEMKESEEKKLKKNEEDRKKQT 1216
>At3g24690.1 68416.m03100 expressed protein similar to hypothetical
protein GB:AAB61487 from [Arabidopsis thaliana]
Length = 158
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 16 AIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLES 156
A+E +++ KR L+K R+ + EE + + + N+E+ L S
Sbjct: 3 AVEGQISALISKRLRTLRKKYNRITDMEESISQGKTLNKEQEDTLRS 49
>At1g18750.1 68414.m02338 MADS-box protein (AGL65) similar to
homeodomain transcription factor (AGL30) GI:3461830 from
[Arabidopsis thaliana]; contains Pfam domain PF00319:
SRF-type transcription factor (DNA-binding and
dimerisation domain); PMID: 12837945
Length = 389
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 34 TTAADKRDENLKKMIERLREHEEQVRK 114
T D +E+L+K IER++ H+E RK
Sbjct: 147 TEHLDLLEESLRKSIERIQIHKEHYRK 173
>At1g03080.1 68414.m00282 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 4 EVYKAIEDKMTTAADKRDENLKKMIER--LREHEEQVRKVRAGNQEKFQQLESAIQEKLQ 177
++ +ED T RDEN IE L E Q++ G + + + LE ++ + Q
Sbjct: 971 DILNRLEDMQTMLLSIRDENQHSAIENLVLIEFLRQLKSEAVGIETEKKILEEELESQCQ 1030
Query: 178 QAADRR 195
Q + R
Sbjct: 1031 QLSFSR 1036
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,036,036
Number of Sequences: 28952
Number of extensions: 155606
Number of successful extensions: 775
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -