BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20563 (753 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 111 8e-25 11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 111 8e-25 08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 111 8e-25 06_01_0080 + 644021-645463 33 0.32 03_02_0966 + 12783515-12783901 32 0.43 07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85... 29 4.0 03_05_0968 + 29277122-29277445,29278389-29278505,29278957-292791... 29 5.2 04_04_1404 + 33302080-33303341,33303435-33305307 28 6.9 10_08_0406 - 17688069-17690643,17691065-17691132 28 9.2 03_05_0804 + 27835508-27835805,27836372-27836421,27837306-278379... 28 9.2 >12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240, 1602920-1602988,1603071-1603328 Length = 320 Score = 111 bits (266), Expect = 8e-25 Identities = 51/84 (60%), Positives = 67/84 (79%) Frame = +1 Query: 256 RGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 435 +GDL EVR+++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI+KGT Sbjct: 95 KGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGT 154 Query: 436 IEIINDVHILKPGDKVGASEATLL 507 +EII V ++K GDKVG+SE+ LL Sbjct: 155 VEIITPVELIKKGDKVGSSESALL 178 Score = 100 bits (240), Expect = 1e-21 Identities = 44/70 (62%), Positives = 56/70 (80%) Frame = +3 Query: 513 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 692 L I PFSYGLV+ VYDSG++F+PE+LD+ EDL KF +GV+ VA++SLAI YPTIA+A Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAA 240 Query: 693 PHSIANGFKN 722 PH NG+KN Sbjct: 241 PHMFLNGYKN 250 Score = 93.1 bits (221), Expect = 2e-19 Identities = 48/84 (57%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Frame = +2 Query: 11 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 190 K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R+ IK H Sbjct: 11 KVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHA 70 Query: 191 DN--NPALEKLLPHIKGNVGFVFT 256 DN N +L+P + GNVG +FT Sbjct: 71 DNTGNKDFLELMPLLVGNVGLIFT 94 >11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028, 1649706-1649774,1649877-1650134 Length = 320 Score = 111 bits (266), Expect = 8e-25 Identities = 51/84 (60%), Positives = 67/84 (79%) Frame = +1 Query: 256 RGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 435 +GDL EVR+++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI+KGT Sbjct: 95 KGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGT 154 Query: 436 IEIINDVHILKPGDKVGASEATLL 507 +EII V ++K GDKVG+SE+ LL Sbjct: 155 VEIITPVELIKKGDKVGSSESALL 178 Score = 100 bits (240), Expect = 1e-21 Identities = 44/70 (62%), Positives = 56/70 (80%) Frame = +3 Query: 513 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 692 L I PFSYGLV+ VYDSG++F+PE+LD+ EDL KF +GV+ VA++SLAI YPTIA+A Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAA 240 Query: 693 PHSIANGFKN 722 PH NG+KN Sbjct: 241 PHMFLNGYKN 250 Score = 93.1 bits (221), Expect = 2e-19 Identities = 48/84 (57%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Frame = +2 Query: 11 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 190 K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R+ IK H Sbjct: 11 KVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHA 70 Query: 191 DN--NPALEKLLPHIKGNVGFVFT 256 DN N +L+P + GNVG +FT Sbjct: 71 DNTGNKDFLELMPLLVGNVGLIFT 94 >08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377, 1716248-1716316,1716408-1716665 Length = 319 Score = 111 bits (266), Expect = 8e-25 Identities = 51/84 (60%), Positives = 67/84 (79%) Frame = +1 Query: 256 RGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 435 +GDL EVR+++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI+KGT Sbjct: 95 KGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGT 154 Query: 436 IEIINDVHILKPGDKVGASEATLL 507 +EII V ++K GDKVG+SE+ LL Sbjct: 155 VEIITPVELIKKGDKVGSSESALL 178 Score = 99.5 bits (237), Expect = 2e-21 Identities = 43/70 (61%), Positives = 56/70 (80%) Frame = +3 Query: 513 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 692 L I PFSYGLV+ VYDSG++F+PE+LD+ +DL KF +GV+ VA++SLAI YPTIA+A Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240 Query: 693 PHSIANGFKN 722 PH NG+KN Sbjct: 241 PHMFLNGYKN 250 Score = 93.5 bits (222), Expect = 2e-19 Identities = 48/84 (57%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Frame = +2 Query: 11 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 190 K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R+ IK H Sbjct: 11 KVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHA 70 Query: 191 DN--NPALEKLLPHIKGNVGFVFT 256 DN N +L+P + GNVG +FT Sbjct: 71 DNTGNKEFLELMPLLVGNVGLIFT 94 >06_01_0080 + 644021-645463 Length = 480 Score = 32.7 bits (71), Expect = 0.32 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = -1 Query: 453 IVDDFNSTL*NLGRDRKSLEERGLLWTEAGVVGGND 346 I+D N N R K++EERGLL+ GV GG + Sbjct: 100 IIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEE 135 >03_02_0966 + 12783515-12783901 Length = 128 Score = 32.3 bits (70), Expect = 0.43 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +3 Query: 630 AGVANVAALSLAIGYPTIASAPHSIANGFKNFWPSLLS 743 AG+A VAA++ A+ P +A A +++ KNF S+ S Sbjct: 67 AGIAAVAAVAAALAVPEVAEAAPALSPSLKNFLLSIAS 104 >07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-853369, 853466-853555,853730-853837,853897-853932,853933-854022 Length = 481 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +3 Query: 603 PEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFK 719 PE RA F AG A V A +P A+A +S GF+ Sbjct: 35 PEKKRASFAAGAAAVRAKVCDARWPASAAAANSAPYGFR 73 >03_05_0968 + 29277122-29277445,29278389-29278505,29278957-29279114, 29279678-29279727,29279968-29280161,29280867-29281049, 29281152-29281270,29281383-29281522,29281857-29281937, 29282286-29282389 Length = 489 Score = 28.7 bits (61), Expect = 5.2 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -3 Query: 256 GEHEANVALDVWQQFLEGWIVVQVVFDGFAHH 161 G HEA+ L W+ + GW + F GFA H Sbjct: 189 GNHEASNYL--WELYYGGWAAPNIYFLGFAGH 218 >04_04_1404 + 33302080-33303341,33303435-33305307 Length = 1044 Score = 28.3 bits (60), Expect = 6.9 Identities = 17/57 (29%), Positives = 25/57 (43%) Frame = +1 Query: 169 QSHQRPPGQQSSPRETVATHQGQRWLRVHRGDLVEVRDKLLENKVQAPARPGAIAPL 339 Q R + + P + + THQG RW + V+ L + V+A P I PL Sbjct: 230 QRRARCAWEYTGPEDYMRTHQGARWDWAPEDFKIVVQRVLNLSSVEASRIPQVILPL 286 >10_08_0406 - 17688069-17690643,17691065-17691132 Length = 880 Score = 27.9 bits (59), Expect = 9.2 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = +1 Query: 31 DHPTLGRVPKMFHRGCR*RGLATDAA-DPYLATWLQYRAHGKKHNDAQSHQR 183 D P R ++FHR R RG A D A D W+ + ND Q H + Sbjct: 789 DDPAARRGARLFHR-LRRRGPAFDKAWDELARFWVHLVVYLAPSNDVQGHAK 839 >03_05_0804 + 27835508-27835805,27836372-27836421,27837306-27837998, 27838077-27838388,27838528-27838698 Length = 507 Score = 27.9 bits (59), Expect = 9.2 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -2 Query: 461 MCTSLMISIVPFEILVGIERAWKKEVFSGPRPVLWAGMTTD 339 +CT L I+ L+G+ +A+ V SGP P G T D Sbjct: 330 ICTGLGIAPRSIGDLIGVVKAYTTRVGSGPFPTELLGKTGD 370 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,586,414 Number of Sequences: 37544 Number of extensions: 501857 Number of successful extensions: 1478 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1424 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1475 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2004270760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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