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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20563
         (753 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160...   111   8e-25
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164...   111   8e-25
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171...   111   8e-25
06_01_0080 + 644021-645463                                             33   0.32 
03_02_0966 + 12783515-12783901                                         32   0.43 
07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85...    29   4.0  
03_05_0968 + 29277122-29277445,29278389-29278505,29278957-292791...    29   5.2  
04_04_1404 + 33302080-33303341,33303435-33305307                       28   6.9  
10_08_0406 - 17688069-17690643,17691065-17691132                       28   9.2  
03_05_0804 + 27835508-27835805,27836372-27836421,27837306-278379...    28   9.2  

>12_01_0211 -
           1601129-1601272,1601670-1602062,1602142-1602240,
           1602920-1602988,1603071-1603328
          Length = 320

 Score =  111 bits (266), Expect = 8e-25
 Identities = 51/84 (60%), Positives = 67/84 (79%)
 Frame = +1

Query: 256 RGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 435
           +GDL EVR+++ + KV APAR G +AP+ VV+P  NTGL P +TSFFQ L+IPTKI+KGT
Sbjct: 95  KGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGT 154

Query: 436 IEIINDVHILKPGDKVGASEATLL 507
           +EII  V ++K GDKVG+SE+ LL
Sbjct: 155 VEIITPVELIKKGDKVGSSESALL 178



 Score =  100 bits (240), Expect = 1e-21
 Identities = 44/70 (62%), Positives = 56/70 (80%)
 Frame = +3

Query: 513 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 692
           L I PFSYGLV+  VYDSG++F+PE+LD+  EDL  KF +GV+ VA++SLAI YPTIA+A
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAA 240

Query: 693 PHSIANGFKN 722
           PH   NG+KN
Sbjct: 241 PHMFLNGYKN 250



 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 48/84 (57%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
 Frame = +2

Query: 11  KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 190
           K  Y  K+ QLLDEY K  I  ADNVGS Q+Q+IR  LRG SIVLMGKNT++R+ IK H 
Sbjct: 11  KVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHA 70

Query: 191 DN--NPALEKLLPHIKGNVGFVFT 256
           DN  N    +L+P + GNVG +FT
Sbjct: 71  DNTGNKDFLELMPLLVGNVGLIFT 94


>11_01_0210 -
           1647922-1648065,1648459-1648851,1648930-1649028,
           1649706-1649774,1649877-1650134
          Length = 320

 Score =  111 bits (266), Expect = 8e-25
 Identities = 51/84 (60%), Positives = 67/84 (79%)
 Frame = +1

Query: 256 RGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 435
           +GDL EVR+++ + KV APAR G +AP+ VV+P  NTGL P +TSFFQ L+IPTKI+KGT
Sbjct: 95  KGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGT 154

Query: 436 IEIINDVHILKPGDKVGASEATLL 507
           +EII  V ++K GDKVG+SE+ LL
Sbjct: 155 VEIITPVELIKKGDKVGSSESALL 178



 Score =  100 bits (240), Expect = 1e-21
 Identities = 44/70 (62%), Positives = 56/70 (80%)
 Frame = +3

Query: 513 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 692
           L I PFSYGLV+  VYDSG++F+PE+LD+  EDL  KF +GV+ VA++SLAI YPTIA+A
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAA 240

Query: 693 PHSIANGFKN 722
           PH   NG+KN
Sbjct: 241 PHMFLNGYKN 250



 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 48/84 (57%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
 Frame = +2

Query: 11  KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 190
           K  Y  K+ QLLDEY K  I  ADNVGS Q+Q+IR  LRG SIVLMGKNT++R+ IK H 
Sbjct: 11  KVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHA 70

Query: 191 DN--NPALEKLLPHIKGNVGFVFT 256
           DN  N    +L+P + GNVG +FT
Sbjct: 71  DNTGNKDFLELMPLLVGNVGLIFT 94


>08_01_0215 -
           1714224-1714364,1714795-1715187,1715279-1715377,
           1716248-1716316,1716408-1716665
          Length = 319

 Score =  111 bits (266), Expect = 8e-25
 Identities = 51/84 (60%), Positives = 67/84 (79%)
 Frame = +1

Query: 256 RGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 435
           +GDL EVR+++ + KV APAR G +AP+ VV+P  NTGL P +TSFFQ L+IPTKI+KGT
Sbjct: 95  KGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGT 154

Query: 436 IEIINDVHILKPGDKVGASEATLL 507
           +EII  V ++K GDKVG+SE+ LL
Sbjct: 155 VEIITPVELIKKGDKVGSSESALL 178



 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 43/70 (61%), Positives = 56/70 (80%)
 Frame = +3

Query: 513 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 692
           L I PFSYGLV+  VYDSG++F+PE+LD+  +DL  KF +GV+ VA++SLAI YPTIA+A
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240

Query: 693 PHSIANGFKN 722
           PH   NG+KN
Sbjct: 241 PHMFLNGYKN 250



 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 48/84 (57%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
 Frame = +2

Query: 11  KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 190
           K  Y  K+ QLLDEY K  I  ADNVGS Q+Q+IR  LRG SIVLMGKNT++R+ IK H 
Sbjct: 11  KVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHA 70

Query: 191 DN--NPALEKLLPHIKGNVGFVFT 256
           DN  N    +L+P + GNVG +FT
Sbjct: 71  DNTGNKEFLELMPLLVGNVGLIFT 94


>06_01_0080 + 644021-645463
          Length = 480

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -1

Query: 453 IVDDFNSTL*NLGRDRKSLEERGLLWTEAGVVGGND 346
           I+D  N    N  R  K++EERGLL+   GV GG +
Sbjct: 100 IIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEE 135


>03_02_0966 + 12783515-12783901
          Length = 128

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +3

Query: 630 AGVANVAALSLAIGYPTIASAPHSIANGFKNFWPSLLS 743
           AG+A VAA++ A+  P +A A  +++   KNF  S+ S
Sbjct: 67  AGIAAVAAVAAALAVPEVAEAAPALSPSLKNFLLSIAS 104


>07_01_0115 +
           851505-852368,852611-852730,853000-853020,853253-853369,
           853466-853555,853730-853837,853897-853932,853933-854022
          Length = 481

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 603 PEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFK 719
           PE  RA F AG A V A      +P  A+A +S   GF+
Sbjct: 35  PEKKRASFAAGAAAVRAKVCDARWPASAAAANSAPYGFR 73


>03_05_0968 +
           29277122-29277445,29278389-29278505,29278957-29279114,
           29279678-29279727,29279968-29280161,29280867-29281049,
           29281152-29281270,29281383-29281522,29281857-29281937,
           29282286-29282389
          Length = 489

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 256 GEHEANVALDVWQQFLEGWIVVQVVFDGFAHH 161
           G HEA+  L  W+ +  GW    + F GFA H
Sbjct: 189 GNHEASNYL--WELYYGGWAAPNIYFLGFAGH 218


>04_04_1404 + 33302080-33303341,33303435-33305307
          Length = 1044

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +1

Query: 169 QSHQRPPGQQSSPRETVATHQGQRWLRVHRGDLVEVRDKLLENKVQAPARPGAIAPL 339
           Q   R   + + P + + THQG RW        + V+  L  + V+A   P  I PL
Sbjct: 230 QRRARCAWEYTGPEDYMRTHQGARWDWAPEDFKIVVQRVLNLSSVEASRIPQVILPL 286


>10_08_0406 - 17688069-17690643,17691065-17691132
          Length = 880

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +1

Query: 31  DHPTLGRVPKMFHRGCR*RGLATDAA-DPYLATWLQYRAHGKKHNDAQSHQR 183
           D P   R  ++FHR  R RG A D A D     W+    +    ND Q H +
Sbjct: 789 DDPAARRGARLFHR-LRRRGPAFDKAWDELARFWVHLVVYLAPSNDVQGHAK 839


>03_05_0804 +
           27835508-27835805,27836372-27836421,27837306-27837998,
           27838077-27838388,27838528-27838698
          Length = 507

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 461 MCTSLMISIVPFEILVGIERAWKKEVFSGPRPVLWAGMTTD 339
           +CT L I+      L+G+ +A+   V SGP P    G T D
Sbjct: 330 ICTGLGIAPRSIGDLIGVVKAYTTRVGSGPFPTELLGKTGD 370


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,586,414
Number of Sequences: 37544
Number of extensions: 501857
Number of successful extensions: 1478
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1475
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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