Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20562
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    27   0.10 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    27   0.10 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    27   0.10 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    27   0.10 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.41 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    25   0.71 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    24   1.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   1.6  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   2.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   3.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   6.7  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   8.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 246 NDFQAVSDIVLMVTRFLNKFIYLFGEFFC 160
           ND  A+   VL++  F + F Y+FG+F C
Sbjct: 373 NDMTAI--YVLLINIFASYFAYIFGKFAC 399


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 246 NDFQAVSDIVLMVTRFLNKFIYLFGEFFC 160
           ND  A+   VL++  F + F Y+FG+F C
Sbjct: 373 NDMTAI--YVLLINIFASYFAYIFGKFAC 399


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 246 NDFQAVSDIVLMVTRFLNKFIYLFGEFFC 160
           ND  A+   VL++  F + F Y+FG+F C
Sbjct: 373 NDMTAI--YVLLINIFASYFAYIFGKFAC 399


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 246 NDFQAVSDIVLMVTRFLNKFIYLFGEFFC 160
           ND  A+   VL++  F + F Y+FG+F C
Sbjct: 373 NDMTAI--YVLLINIFASYFAYIFGKFAC 399


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 17/71 (23%), Positives = 35/71 (49%)
 Frame = -3

Query: 479 FTFNFLVQIFIILMFFNKYHDASSHCTHGGTDILPTWSVTVLDVLLLANRR*VTHDFYG* 300
           F   F + +F+IL+++    +  +  T+G      T++  ++ V+ L+     T  F+G 
Sbjct: 324 FIILFYLSVFVILVYYASLDETPNPVTNGKLYNFNTFAKLLILVVSLSG----TFGFFGT 379

Query: 299 NVSSKENHALF 267
           ++ S  N A F
Sbjct: 380 HILSYINKASF 390


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 569 SYILVIKSALNFFFIII 619
           SYI+++  A N +FIII
Sbjct: 163 SYIIIVSFATNLYFIII 179


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 226 RNGLKIVQKHYVWVKRAWFSLLE 294
           +NG K + +H +  KR W++ LE
Sbjct: 83  KNGSKKIMRHLIDHKRDWWNELE 105


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 521 SYLVLKLNSKTFKLINSYILV 583
           +YL+L   + T+ ++N Y+LV
Sbjct: 18  NYLILSNKNNTYLVLNKYLLV 38


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -2

Query: 231 VSDIVLMVTRFLNKFIYLFGEFFCGHRFRYYTTMFD 124
           +S + L+    +  F+Y F  F  G  F ++T +FD
Sbjct: 128 ISILELVAVHLVLAFLYSFDLFANGITFGWHTYIFD 163


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 52  QEPVEQEDQADVSIKAEPQSHDEKVE 129
           +EP E     D  +++ P +H+E +E
Sbjct: 92  REPEELRRLMDFGVRSAPSTHEELLE 117


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -2

Query: 123 FFIVALRFSFNADISLVFLFDRFLLYF-THNFK 28
           FF  AL   +  + S+ FLFD F   F  HN +
Sbjct: 67  FFCTALVIFYCQEGSVDFLFDNFSAAFQDHNIE 99


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -2

Query: 123 FFIVALRFSFNADISLVFLFDRFLLYF-THNFK 28
           FF  AL   +  + S+ FLFD F   F  HN +
Sbjct: 300 FFCTALVIFYCQEGSVDFLFDNFSAAFQDHNIE 332


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -2

Query: 123 FFIVALRFSFNADISLVFLFDRFLLYF-THNFK 28
           FF  AL   +  + S+ FLFD F   F  HN +
Sbjct: 300 FFCTALVIFYCQEGSVDFLFDNFSAAFQDHNIE 332


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 494 TEQFYFTFNFLVQIFIILMF 435
           T  F+F   F V IF++L+F
Sbjct: 185 TTLFFFNRTFGVPIFLVLVF 204


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 426 LVKEHEDYKDLYEEVKSEIKL 488
           L ++ + YK  YE+    IKL
Sbjct: 416 LAEDKDGYKKFYEQFSKNIKL 436


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -3

Query: 488 QFYFTFNFLVQIFIILMFFNKYHDAS 411
           Q  F F + + +F +   +   H+AS
Sbjct: 142 QLVFVFCYFIYLFTVYYIYYSVHEAS 167


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -2

Query: 192 KFIYLFGEFFCGHRFRYYTTMFDFFIVALRFSFNADISLVF 70
           KF+   G+       ++Y   F   I+A   +  A ISLV+
Sbjct: 82  KFLLKLGQLLGLAPVKFYVQKFYVVILAFLLTAGAIISLVY 122


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -2

Query: 192 KFIYLFGEFFCGHRFRYYTTMFDFFIVALRFSFNADISLVF 70
           KF+   G+       ++Y   F   I+A   +  A ISLV+
Sbjct: 8   KFLLKLGQLLGLAPVKFYVQKFYVVILAFLLTAGAIISLVY 48


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 306 WVKCLQQRKPC 274
           +V CL ++KPC
Sbjct: 45  YVNCLLEKKPC 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,481
Number of Sequences: 336
Number of extensions: 3518
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)