Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20562
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    39   1e-04
AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    24   4.8  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    24   4.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   4.8  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   6.3  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   6.3  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   8.4  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 39.1 bits (87), Expect = 1e-04
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +3

Query: 276 MVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIGAAMGTMRGCIMVLVKEHED 446
           +V  A D+ PIE++ +LPA+C +  V YC    +  +G  +   + C  V + + E+
Sbjct: 160 LVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKARLGTLV-YRKTCTCVALTQFEN 215


>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 306 WVKCLQQRKPCP 271
           +V CL  RKPCP
Sbjct: 50  YVDCLLSRKPCP 61


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 306 WVKCLQQRKPCP 271
           +V CL  RKPCP
Sbjct: 50  YVDCLLSRKPCP 61


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 331 RFARRRTSNTVTLQVGRISVPPWVQCEDASW 423
           R A+RR    V+  + R   P W +  D  W
Sbjct: 776 RVAKRRLLAGVSEAIIRYGAPIWAEATDRQW 806


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 7/32 (21%)
 Frame = -2

Query: 234 AVSDIVLMVTR------FL-NKFIYLFGEFFC 160
           AVSD +L+V+       F+ +K+ Y+FGE FC
Sbjct: 88  AVSDFLLLVSGVPQEIYFIWSKYPYVFGETFC 119


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 31  EIMGKVKQEPVEQEDQADVSIKAEPQSHDEK 123
           EI  + ++E  EQ+   + S+K+  Q H +K
Sbjct: 202 EINEQARREREEQDKMKNESLKSAQQHHSQK 232


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +1

Query: 337 ARRRTSNTVTLQVGRISVPPWVQCEDASW 423
           A+RR    V   + R + P W +  D  W
Sbjct: 781 AKRRLLAAVAESIIRYAAPVWSEATDLQW 809


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,495
Number of Sequences: 2352
Number of extensions: 13433
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)