Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20561
(606 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 86 2e-17
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 86 2e-17
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 73 2e-13
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 68 5e-12
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 68 5e-12
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 68 5e-12
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 68 5e-12
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 68 5e-12
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 47 9e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 45 5e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 45 5e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 45 5e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 45 5e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 45 5e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 45 5e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 45 5e-05
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 42 3e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 42 3e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 42 3e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.002
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 39 0.003
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 39 0.003
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 39 0.003
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 39 0.003
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 39 0.003
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 39 0.003
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 39 0.003
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 39 0.003
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 38 0.007
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 38 0.007
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 38 0.007
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 36 0.030
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 36 0.030
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 36 0.030
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 35 0.039
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 34 0.069
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 34 0.069
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 34 0.069
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 34 0.069
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 34 0.069
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 34 0.069
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 34 0.091
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 34 0.091
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 34 0.091
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 34 0.091
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 33 0.12
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.12
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 33 0.12
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 33 0.21
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 33 0.21
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 33 0.21
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 32 0.28
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 32 0.37
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 31 0.48
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 31 0.64
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 31 0.64
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 31 0.64
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 0.64
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 31 0.84
AF039035-2|AAB94162.1| 304|Caenorhabditis elegans Hypothetical ... 31 0.84
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 30 1.1
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 30 1.1
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 30 1.1
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 30 1.1
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 30 1.1
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 30 1.1
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 30 1.5
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 30 1.5
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 30 1.5
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 2.6
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 2.6
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 29 2.6
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 29 2.6
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 29 2.6
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 29 2.6
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 29 3.4
Z78067-9|CAB01528.2| 450|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical pr... 28 5.9
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 5.9
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 27 7.9
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 27 7.9
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 27 7.9
AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine re... 27 7.9
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 7.9
AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical ... 27 7.9
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 85.8 bits (203), Expect = 2e-17
Identities = 46/103 (44%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 428
F YGE+ VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R
Sbjct: 49 FTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRE 108
Query: 429 G-KIFVGGLSSEISDDEIRNFFSEFGTI*KWRCPLTKQRTKER 554
K+FVGGL S+ S+ ++R+ F +FG + P KQ TK R
Sbjct: 109 NKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQ-TKAR 150
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 428
F +G+++ I D T R FAFIVF+ ES DK + + T ++ D KKA
Sbjct: 130 FEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VPQ 188
Query: 429 GKIFVG 446
GK F G
Sbjct: 189 GKRFPG 194
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 100 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHF 252
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L HF
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHF 49
Score = 32.7 bits (71), Expect = 0.21
Identities = 10/26 (38%), Positives = 22/26 (84%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
KIFVGG+S E++++++ + F+++G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEV 55
Score = 32.7 bits (71), Expect = 0.21
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 512 EVEMPFDKTKNQRKGFCFITFESEQ 586
++E PFDK R+ F FI FE E+
Sbjct: 138 DIEWPFDKQTKARRNFAFIVFEEEE 162
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHF 252
+++K+FVGGL + ++++LR HF
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHF 130
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 85.8 bits (203), Expect = 2e-17
Identities = 46/103 (44%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 428
F YGE+ VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R
Sbjct: 49 FTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRE 108
Query: 429 G-KIFVGGLSSEISDDEIRNFFSEFGTI*KWRCPLTKQRTKER 554
K+FVGGL S+ S+ ++R+ F +FG + P KQ TK R
Sbjct: 109 NKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQ-TKAR 150
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 428
F +G+++ I D T R FAFIVF+ ES DK + + T ++ D KKA
Sbjct: 130 FEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VPQ 188
Query: 429 GKIFVG 446
GK F G
Sbjct: 189 GKRFPG 194
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 100 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHF 252
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L HF
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHF 49
Score = 32.7 bits (71), Expect = 0.21
Identities = 10/26 (38%), Positives = 22/26 (84%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
KIFVGG+S E++++++ + F+++G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEV 55
Score = 32.7 bits (71), Expect = 0.21
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 512 EVEMPFDKTKNQRKGFCFITFESEQ 586
++E PFDK R+ F FI FE E+
Sbjct: 138 DIEWPFDKQTKARRNFAFIVFEEEE 162
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHF 252
+++K+FVGGL + ++++LR HF
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHF 130
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK------ 410
F +GE+ V DP T R+RGF FI F P S+DKV+ EH ++ KK+DPK
Sbjct: 65 FGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKR 124
Query: 411 ---KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
K + K+F+GGLS+ + ++++ +F +G +
Sbjct: 125 TQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKV 160
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 425
F YG++E + D T R RGF F+ F + E DKV H IN K V+ KKA+ +
Sbjct: 154 FETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 175 GRDDDRKLFVGGLSWETTDKELRDHFG 255
G D K+F+GGLSW+TT + LRD+FG
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFG 66
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 375 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
E +N D GK+F+GGLS + + + +R++F FG +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEV 71
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 527 FDKTKNQRKGFCFITFESEQVVN 595
FDK + +GF F+TF+S++V +
Sbjct: 167 FDKATQRHRGFGFVTFDSDEVAD 189
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK------ 410
F +GE+ V DP T R+RGF FI F P S+DKV+ EH ++ KK+DPK
Sbjct: 65 FGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKR 124
Query: 411 ---KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
K + K+F+GGLS+ + ++++ +F +G +
Sbjct: 125 TQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKV 160
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 425
F YG++E + D T R RGF F+ F + E DKV H IN K V+ KKA+ +
Sbjct: 154 FETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 175 GRDDDRKLFVGGLSWETTDKELRDHFG 255
G D K+F+GGLSW+TT + LRD+FG
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFG 66
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 375 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
E +N D GK+F+GGLS + + + +R++F FG +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEV 71
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 527 FDKTKNQRKGFCFITFESEQVVN 595
FDK + +GF F+TF+S++V +
Sbjct: 167 FDKATQRHRGFGFVTFDSDEVAD 189
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 68.1 bits (159), Expect = 5e-12
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Frame = +3
Query: 258 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK- 434
+GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 46 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 105
Query: 435 ----------IFVGGLSSEISDDEIRNFFSEFGTI*KWRCPLTKQRTKER 554
++V G+ + ++D + +F+++GT+ K L K K R
Sbjct: 106 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 425
F YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 134 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
KIFVGGL+S +DD +R F+S+FG I
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEI 49
Score = 31.1 bits (67), Expect = 0.64
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 124 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHF 252
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ +
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFY 43
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 68.1 bits (159), Expect = 5e-12
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Frame = +3
Query: 258 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK- 434
+GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 8 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 67
Query: 435 ----------IFVGGLSSEISDDEIRNFFSEFGTI*KWRCPLTKQRTKER 554
++V G+ + ++D + +F+++GT+ K L K K R
Sbjct: 68 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 117
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 425
F YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 96 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 68.1 bits (159), Expect = 5e-12
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Frame = +3
Query: 258 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK- 434
+GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 8 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 67
Query: 435 ----------IFVGGLSSEISDDEIRNFFSEFGTI*KWRCPLTKQRTKER 554
++V G+ + ++D + +F+++GT+ K L K K R
Sbjct: 68 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 117
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 425
F YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 96 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 68.1 bits (159), Expect = 5e-12
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Frame = +3
Query: 258 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK- 434
+GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 46 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 105
Query: 435 ----------IFVGGLSSEISDDEIRNFFSEFGTI*KWRCPLTKQRTKER 554
++V G+ + ++D + +F+++GT+ K L K K R
Sbjct: 106 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 425
F YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 134 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
KIFVGGL+S +DD +R F+S+FG I
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEI 49
Score = 31.1 bits (67), Expect = 0.64
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 124 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHF 252
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ +
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFY 43
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 68.1 bits (159), Expect = 5e-12
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Frame = +3
Query: 258 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK- 434
+GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 46 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 105
Query: 435 ----------IFVGGLSSEISDDEIRNFFSEFGTI*KWRCPLTKQRTKER 554
++V G+ + ++D + +F+++GT+ K L K K R
Sbjct: 106 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 425
F YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 134 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
KIFVGGL+S +DD +R F+S+FG I
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEI 49
Score = 31.1 bits (67), Expect = 0.64
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 124 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHF 252
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ +
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFY 43
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 47.2 bits (107), Expect = 9e-06
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 404
F YG I+S+N+ DP+TG RGFA I F + + +K + H I+ +VD
Sbjct: 45 FKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRVD 96
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 401
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 402 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
D + R K+F+G LS + +++ +R F++FG I
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 401
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 402 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
D + R K+F+G LS + +++ +R F++FG I
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 401
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 402 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
D + R K+F+G LS + +++ +R F++FG I
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 401
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 402 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
D + R K+F+G LS + +++ +R F++FG I
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 401
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 402 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
D + R K+F+G LS + +++ +R F++FG I
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 401
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 402 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
D + R K+F+G LS + +++ +R F++FG I
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 401
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 402 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
D + R K+F+G LS + +++ +R F++FG I
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 425
F +G + V DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 69 FSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 127
Score = 35.1 bits (77), Expect = 0.039
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
K+F+GGLS + +D+++ N+FS++G +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPV 75
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHF 252
RKLF+GGLS +TTD++L ++F
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYF 69
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 425
F +G + V DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 89 FSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 147
Score = 35.1 bits (77), Expect = 0.039
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
K+F+GGLS + +D+++ N+FS++G +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPV 95
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHF 252
RKLF+GGLS +TTD++L ++F
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYF 89
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 425
F +G + V DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 90 FSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 148
Score = 35.1 bits (77), Expect = 0.039
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
K+F+GGLS + +D+++ N+FS++G +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPV 96
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHF 252
RKLF+GGLS +TTD++L ++F
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYF 90
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 40.7 bits (91), Expect = 8e-04
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 428
F YGE+ +IN+ D +TG+S+GFAF+ +K S ++A N + + + H
Sbjct: 58 FSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TILAV--DNFNGISLHKRMIRVDH 113
Query: 429 GKIFVGGLSSEISDDEIRNFFSE 497
+ + E +DDE + + E
Sbjct: 114 VEEYKVPKYKEDADDETKRLWEE 136
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 261 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA-RHGKI 437
G +E++ + D +TG+ +GFAF+ FK S+ +A TI +K D + K + G +
Sbjct: 271 GPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LALSMETIKMEKRDLRITKVMKKGHL 328
Query: 438 FVGGLSSEISDDEIRNFFSEFGTI*KWRCPLTKQRTKER 554
+ + + +N G + K++ K+RT E+
Sbjct: 329 TKIQTAKKRTSHGKKNQNEITGKLHKFKFSTKKERTTEQ 367
Score = 34.7 bits (76), Expect = 0.052
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +3
Query: 324 FIVFKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVGGLSSEISDDEIRN 485
++ F A ES++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 486 FFS 494
FFS
Sbjct: 265 FFS 267
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 435 IFVGGLSSEISDDEIRNFFSEFGTI*KWR----CPLTKQRTKERASVSSHLN 578
+FVG + +++ +R FS+FGTI R P ++ TK ++ LN
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHLTGKLN 196
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Frame = +3
Query: 261 GEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH--- 428
G + S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 37 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM 96
Query: 429 ---GKIFVGGLSSEISDDEIRNFFSEFGTI 509
IFVG L E+ + + + FS FG I
Sbjct: 97 DVGANIFVGNLDPEVDEKLLYDTFSAFGVI 126
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 246 SFWAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 371
+F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 119 TFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Frame = +3
Query: 261 GEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH--- 428
G + S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 47 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM 106
Query: 429 ---GKIFVGGLSSEISDDEIRNFFSEFGTI 509
IFVG L E+ + + + FS FG I
Sbjct: 107 DVGANIFVGNLDPEVDEKLLYDTFSAFGVI 136
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 246 SFWAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 371
+F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 129 TFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Frame = +3
Query: 303 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-------GKIFVGGLSSE 461
G S+GF F+ + +KV+A +H I+ ++ D K R +IFVG L+ +
Sbjct: 210 GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDK 269
Query: 462 ISDDEIRNFFSE 497
+ + ++R F +
Sbjct: 270 VDEHQLRKVFGD 281
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 312 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 425
RGFAF+ + E+ +++++ G T+N V A+ R
Sbjct: 302 RGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPR 339
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAAGEHTINNKKVD-----PK 410
F + GEIES + D TG+S G+ F+ + + +++ V + + NK + P
Sbjct: 62 FTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPS 121
Query: 411 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
+ + ++V G+ ++ E+ + F FG I
Sbjct: 122 NDQIKGSNLYVSGIPKSMTLHELESIFRPFGQI 154
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 347
F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 337 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------D 404
F A G + SI V D T S G+A++ F+ P ++ M ++ K + D
Sbjct: 52 FSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRD 111
Query: 405 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
P ++ G IF+ L I + I + FS FG I
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNI 146
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 371
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 347
F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 277 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 308
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 371
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 211
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 347
F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 274 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 305
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 371
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 208
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 347
F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 337 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------D 404
F A G + SI V D T S G+A++ F+ P ++ M ++ K + D
Sbjct: 52 FSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRD 111
Query: 405 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
P ++ G IF+ L I + I + FS FG I
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNI 146
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 371
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 428
F +G++E +++KT NT + +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGY 244
Query: 429 GK------IFVGGLSSEISDDEIRNFFSEFGTI 509
GK +FVGGL S + ++ F EFG +
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFV 277
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 435 IFVGGLSSEISDDEIRNFFSEFGTI 509
+FVG + S++ + EIR+ F E G +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKV 195
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 428
F +G++E +++KT NT + +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGY 244
Query: 429 GK------IFVGGLSSEISDDEIRNFFSEFGTI 509
GK +FVGGL S + ++ F EFG +
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFV 277
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 435 IFVGGLSSEISDDEIRNFFSEFGTI 509
+FVG + S++ + EIR+ F E G +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKV 195
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 428
F +G++E +++KT NT + +AF++F+ + + A E + + K +
Sbjct: 166 FEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGY 221
Query: 429 GK------IFVGGLSSEISDDEIRNFFSEFGTI 509
GK +FVGGL S + ++ F EFG +
Sbjct: 222 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFV 254
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 435 IFVGGLSSEISDDEIRNFFSEFGTI 509
+FVG + S++ + EIR+ F E G +
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKV 172
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 246 SFWAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 350
+F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 121 AFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 246 SFWAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 350
+F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 121 AFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 246 SFWAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 350
+F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 121 AFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 35.5 bits (78), Expect = 0.030
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVF----------------KAPESIDKVMAAGEH 380
F +G+I + D TG +G AF+ + K +++ M
Sbjct: 49 FEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPA 108
Query: 381 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
+++ PK K K+F+G LS + S+DE+R F+ FG +
Sbjct: 109 DTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGEL 150
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 151 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHF 252
D A + DD+KLF+G LS + ++ E+R F
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALF 144
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 35.5 bits (78), Expect = 0.030
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Frame = +3
Query: 261 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKA 416
G + SI V D + S G+A++ F+ P ++ + I+ + + DP
Sbjct: 81 GPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAAR 140
Query: 417 KARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
+A +G IF+ L I + + + FS FG I
Sbjct: 141 RAGNGNIFIKNLDRVIDNKSVYDTFSLFGNI 171
Score = 34.7 bits (76), Expect = 0.052
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 347
F ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 363 FSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 32.3 bits (70), Expect = 0.28
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 14/102 (13%)
Frame = +3
Query: 246 SFWAYGEIESINVKTDPNTGRSRGFAFIVFKAPES----IDKV--MAAGEHTINNKKVDP 407
+F +G I S V TD + G S+G+ F+ F+ S I+KV M + + K P
Sbjct: 164 TFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQP 222
Query: 408 KKAKAR--------HGKIFVGGLSSEISDDEIRNFFSEFGTI 509
+ + + + +FV + +++ FS+FG I
Sbjct: 223 RAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 435 IFVGGLSSEISDDEIRNFFSEFGTI 509
++V + +++DD +R+ FS FGTI
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTI 369
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 35.5 bits (78), Expect = 0.030
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Frame = +3
Query: 261 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKA 416
G + SI V D + S G+A++ F+ P ++ + I+ + + DP
Sbjct: 81 GPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAAR 140
Query: 417 KARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
+A +G IF+ L I + + + FS FG I
Sbjct: 141 RAGNGNIFIKNLDRVIDNKSVYDTFSLFGNI 171
Score = 34.7 bits (76), Expect = 0.052
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 347
F ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 363 FSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 32.3 bits (70), Expect = 0.28
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 14/102 (13%)
Frame = +3
Query: 246 SFWAYGEIESINVKTDPNTGRSRGFAFIVFKAPES----IDKV--MAAGEHTINNKKVDP 407
+F +G I S V TD + G S+G+ F+ F+ S I+KV M + + K P
Sbjct: 164 TFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQP 222
Query: 408 KKAKAR--------HGKIFVGGLSSEISDDEIRNFFSEFGTI 509
+ + + + +FV + +++ FS+FG I
Sbjct: 223 RAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 435 IFVGGLSSEISDDEIRNFFSEFGTI 509
++V + +++DD +R+ FS FGTI
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTI 369
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 35.5 bits (78), Expect = 0.030
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVF----------------KAPESIDKVMAAGEH 380
F +G+I + D TG +G AF+ + K +++ M
Sbjct: 49 FEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPA 108
Query: 381 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
+++ PK K K+F+G LS + S+DE+R F+ FG +
Sbjct: 109 DTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGEL 150
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 151 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHF 252
D A + DD+KLF+G LS + ++ E+R F
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALF 144
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 261 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKARHGKI 437
G+I + + DP +G SRG+AF+ + E + H I+ K + ++
Sbjct: 224 GKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRL 283
Query: 438 FVGGLSSEISDDEI 479
F+G + S DEI
Sbjct: 284 FIGNIPKTKSKDEI 297
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 35.1 bits (77), Expect = 0.039
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 404
F +G+IE V TD NT +SRG+ F+ K S ++ I+ +K +
Sbjct: 55 FEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGRKAN 106
Score = 31.1 bits (67), Expect = 0.64
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
KIFVGGL SD + +F +FG I
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDI 61
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 145 SQDHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHF 252
+Q N+ G D K+FVGGL + T+DK L ++F
Sbjct: 18 AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYF 55
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 34.3 bits (75), Expect = 0.069
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 350
F YGE+ + V D TG +GFA + F PE+
Sbjct: 299 FKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 398
F YG+I ++K G+ RGFAF+ F S +A T N K
Sbjct: 23 FEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAKSNQTFFNSK 71
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.069
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR 425
F+AYG + S+ + T N S+GF F+ + ES +K AA E + + ++ ++A
Sbjct: 71 FFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPT 128
Query: 426 HGKI 437
K+
Sbjct: 129 RRKL 132
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 34.3 bits (75), Expect = 0.069
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +3
Query: 258 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK---VMAAGEHTINNKKVDPKKAKARH 428
+G +S++ N + + V + +S D+ A HT+ + +
Sbjct: 145 FGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVVS 204
Query: 429 GKIFVGGLSSEISDDEIRNFFSEFGTI 509
K+FVGG+S ++ I FF +FGT+
Sbjct: 205 NKVFVGGISHMMNRKIINKFFGQFGTV 231
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 426 HGKIFVGGLSSEISDDEIRNFFSEFGTI 509
H +F+GGL ++ +EI FSEFG +
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVV 345
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 34.3 bits (75), Expect = 0.069
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +3
Query: 258 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK---VMAAGEHTINNKKVDPKKAKARH 428
+G +S++ N + + V + +S D+ A HT+ + +
Sbjct: 145 FGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVVS 204
Query: 429 GKIFVGGLSSEISDDEIRNFFSEFGTI 509
K+FVGG+S ++ I FF +FGT+
Sbjct: 205 NKVFVGGISHMMNRKIINKFFGQFGTV 231
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 426 HGKIFVGGLSSEISDDEIRNFFSEFGTI 509
H +F+GGL ++ +EI FSEFG +
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVV 345
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 34.3 bits (75), Expect = 0.069
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +3
Query: 258 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK---VMAAGEHTINNKKVDPKKAKARH 428
+G +S++ N + + V + +S D+ A HT+ + +
Sbjct: 145 FGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVVS 204
Query: 429 GKIFVGGLSSEISDDEIRNFFSEFGTI 509
K+FVGG+S ++ I FF +FGT+
Sbjct: 205 NKVFVGGISHMMNRKIINKFFGQFGTV 231
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 426 HGKIFVGGLSSEISDDEIRNFFSEFGTI 509
H +F+GGL ++ +EI FSEFG +
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVV 345
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.069
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR 425
F+AYG + S+ + T N S+GF F+ + ES +K AA E + + ++ ++A
Sbjct: 71 FFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPT 128
Query: 426 HGKI 437
K+
Sbjct: 129 RRKL 132
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 33.9 bits (74), Expect = 0.091
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 365
F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 25 FSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 33.9 bits (74), Expect = 0.091
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Frame = +3
Query: 246 SFWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEHTI------- 386
+F +GE+ V D T +S+G+ F+ F ++ + +A G+ +
Sbjct: 154 TFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAAR 213
Query: 387 -NNKKVDPK--------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
N+++ K KA + ++VG +S + +D ++R+ FS +G I
Sbjct: 214 KNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLFSTYGDI 263
Score = 32.7 bits (71), Expect = 0.21
Identities = 11/44 (25%), Positives = 29/44 (65%)
Frame = +3
Query: 378 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
H+ + ++ + ++H +FVG LS ++S++ +++ F++FG +
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEV 161
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHF 252
D+ ++VG +S +TTD +LRD F
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLF 257
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 33.9 bits (74), Expect = 0.091
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
K+FVGGL S + + +I NFFS +G +
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGRL 114
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 33.9 bits (74), Expect = 0.091
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHFG 255
RK+FVGG+ W+ T+ L+D FG
Sbjct: 295 RKIFVGGVPWDITEAALKDSFG 316
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGT 506
KIFVGG+ +I++ +++ F EFG+
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS 320
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 423 RHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
RH +FVG LSSE+ + ++R F FG +
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDV 48
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 423 RHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
RH +FVG LSSE+ + ++R F FG +
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDV 58
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 423 RHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
RH +FVG LSSE+ + ++R F FG +
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDV 161
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 423 RHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
RH +FVG LSSE+ + ++R F FG +
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDV 129
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVF 335
F A G + ++ + D TGR RGFAF+ F
Sbjct: 26 FAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 32.7 bits (71), Expect = 0.21
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Frame = +3
Query: 312 RGFAFIVFKAPESIDKVMAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLS 455
RGFA++V + + + + + + + DP+K K+FV +
Sbjct: 632 RGFAYVVMENDQKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVH 691
Query: 456 SEISDDEIRNFFSEFGTI 509
+ +DDE++ FS+FGT+
Sbjct: 692 FQATDDELKALFSKFGTV 709
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 169 APGRDDDRKLFVGGLSWETTDKELR 243
APG +D R +FV L + TT+ E+R
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIR 610
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 353
F A G + + + TD TGRS+G ++ F ES+
Sbjct: 45 FSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 353
F A G + + + TD TGRS+G ++ F ES+
Sbjct: 190 FSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 408 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
K +RH +FVG L SEI ++R F +FG +
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEV 158
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 378 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
H + K D +A A + ++VG +++ + +DEIR F FG I
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPI 281
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 31.9 bits (69), Expect = 0.37
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 160 SAEAPGRDDDRKLFVGGLSWETTDKELRDHF 252
+AE + D R ++VG + W++T E+ +HF
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHF 66
Score = 31.5 bits (68), Expect = 0.48
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 401
F G++ + + D TG + FAF+ F+ ES+ + N+K+
Sbjct: 66 FAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLALVLSGTMFRNRKI 116
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 426 HGKIFVGGLSSEISDDEIRNFFSEFGTI 509
H +F+GGL ++ +EI FSEFG +
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVV 131
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 31.1 bits (67), Expect = 0.64
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 435 IFVGGLSSEISDDEIRNFFSEFGTI 509
+FVG +S ++S+D IR+ FS+ G +
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNV 44
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 31.1 bits (67), Expect = 0.64
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 372 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI*KWR 521
G+HT + + K +FVG +S + SD+ IR +E G + W+
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWK 77
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 31.1 bits (67), Expect = 0.64
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 372 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI*KWR 521
G+HT + + K +FVG +S + SD+ IR +E G + W+
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWK 77
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.64
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 405 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
PKK ++FVG L +E+ + E++ FS G I
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDI 142
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 31.1 bits (67), Expect = 0.64
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 405 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
PKK ++FVG L +E+ + E++ FS G I
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDI 142
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.1 bits (67), Expect = 0.64
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 405 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 509
PKK ++FVG L +E+ + E++ FS G I
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDI 142
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 30.7 bits (66), Expect = 0.84
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 261 GEIESINVKTDPNTGRSRGFAFIVF 335
G + ++ + D TGR RGFAF+ F
Sbjct: 28 GNVSNVRIVCDRETGRPRGFAFVEF 52
>AF039035-2|AAB94162.1| 304|Caenorhabditis elegans Hypothetical
protein C53A3.1 protein.
Length = 304
Score = 30.7 bits (66), Expect = 0.84
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 246 SFWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 425
SFW +N +TDP+T F FI + P+ + KVM T++ +D +
Sbjct: 137 SFWIDELRRLVNFRTDPHT--YYNFNFIPYDEPKQLMKVMTFLNETLS---IDHVEIMMD 191
Query: 426 HGKIF 440
H K+F
Sbjct: 192 HDKLF 196
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI*K 515
K++VGGL S+ + E+ F FG I K
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRK 31
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI*K 515
K++VGGL S+ + E+ F FG I K
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRK 31
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI*K 515
K++VGGL S+ + E+ F FG I K
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRK 31
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 157 NSAEAPGRDDD--RKLFVGGLSWETTDKELRDHF 252
N AE P +D R LFVG +++ET++ +LR F
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREF 124
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 208 GLSWETTDKELRDHFGH 258
GL WE T++ELRD FG+
Sbjct: 11 GLPWEATEQELRDFFGN 27
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 208 GLSWETTDKELRDHFGH 258
GL WE T++ELRD FG+
Sbjct: 11 GLPWEATEQELRDFFGN 27
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 347
F +GEI ++ D +G SRGF FI F E
Sbjct: 96 FGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIE 128
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 118 GNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFG 255
G GGG + + + L V LS TT+K+LRD FG
Sbjct: 52 GGGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFG 97
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 193 KLFVGGLSWETTDKELRDHF 252
++FVGG TT+ ELR+HF
Sbjct: 67 RIFVGGFPTSTTETELREHF 86
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 193 KLFVGGLSWETTDKELRDHF 252
++FVGG TT+ ELR+HF
Sbjct: 68 RIFVGGFPTSTTETELREHF 87
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 512 EVEMPFDKTKNQRKGFCFITFESEQVVN 595
++ + D+ KGF ++TFE+EQ +N
Sbjct: 40 DIHLVHDRDSGSFKGFAYVTFENEQQMN 67
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 360 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTI 509
+M + + K P A+ + K+F+GGL ++S++++ F FG +
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKV 271
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +3
Query: 258 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG----EHTINNKKVDPK 410
YG++ + + DP +G A + F ++ + ++ H NNK+V+ K
Sbjct: 389 YGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGRFVQVNHAENNKRVEIK 443
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 70 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 195
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 70 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 195
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
KIF+GGL + +++D+++ FG +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPL 317
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
KIF+GGL + +++D+++ FG +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPL 317
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
KIF+GGL + +++D+++ FG +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPL 292
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
KIF+GGL + +++D+++ FG +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPL 295
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
+I++G L+S +S+ +I +FF +G I
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQI 29
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
+I++G L+S +S+ +I +FF +G I
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQI 29
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 432 KIFVGGLSSEISDDEIRNFFSEFGTI 509
+I++G L+S +S+ +I +FF +G I
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQI 29
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI---NNKKVD 404
F YG+I++I++ D TG +G+A + ++ + ++ + T N KVD
Sbjct: 75 FSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQNVKVD 129
>Z78067-9|CAB01528.2| 450|Caenorhabditis elegans Hypothetical
protein ZC412.1 protein.
Length = 450
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 258 MPKMITELLICGLPAQPTNKKFSVVIASWGLSTVMILRITATV 130
M + I +++C L PT + FSV+I+SW L + I R + V
Sbjct: 91 MKRWIFGIIMCKLV--PTCQAFSVLISSWSLCYIAIDRYRSIV 131
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 112 LNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHF 252
+N N + SQ + E D + ++VG + + T +E+ HF
Sbjct: 52 MNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHF 98
>Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical
protein B0001.3b protein.
Length = 575
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 91 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 189
D+ N+ N ++ + GGDS + E DDD
Sbjct: 416 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 448
>Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical
protein B0001.3a protein.
Length = 591
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 91 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 189
D+ N+ N ++ + GGDS + E DDD
Sbjct: 432 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 464
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 309 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 428
SRGF IVF A ++++V G H +N+ K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 249 FWAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 368
F G + I + D TG +GFAF+ F++ + + +A
Sbjct: 196 FGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 246 SFWAYGEIESINVKTDPNTGRSRGFAFIVF 335
+F YG+I +++ D + +S+GF F+ F
Sbjct: 38 TFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 246 SFWAYGEIESINVKTDPNTGRSRGFAFIVF 335
+F YG+I +++ D + +S+GF F+ F
Sbjct: 38 TFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine
receptor, class w protein95 protein.
Length = 363
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 149 CESPPPFSAFPLSWLSVVIS 90
CE P P S F + W++VVI+
Sbjct: 107 CEPPAPLSFFYMYWINVVIN 126
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 286 RQIQTQADHEGLPSLCLR 339
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
>AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical
protein Y110A2AL.5 protein.
Length = 246
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -1
Query: 228 CGLPAQPTNKKFSVVIASWGLSTVMILRITATVLCISIKLVVGG 97
C P QP + S+V+ W + + R A CI L + G
Sbjct: 143 CPAPGQPFRRTESLVVCIWTFNETVATREEAKTFCIGKGLKLTG 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,980,625
Number of Sequences: 27780
Number of extensions: 290787
Number of successful extensions: 1147
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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