Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20559
(711 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 27 0.11
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 27 0.11
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 3.2
AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein. 23 3.2
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 3.2
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 23 3.2
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 3.2
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 22 5.7
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 7.5
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 7.5
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 7.5
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 9.9
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 9.9
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 21 9.9
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 9.9
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 27.5 bits (58), Expect = 0.11
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 418 DGHLLTRTFLVTERITLADVIVFSTLLHAFR 510
DGH++ TF +E + DV++ + L+ FR
Sbjct: 624 DGHVILETFHFSEADFVMDVVMLAVLIVGFR 654
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 27.5 bits (58), Expect = 0.11
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 418 DGHLLTRTFLVTERITLADVIVFSTLLHAFR 510
DGH++ TF +E + DV++ + L+ FR
Sbjct: 624 DGHVILETFHFSEADFVMDVVMLAVLIVGFR 654
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -3
Query: 649 FLGSYVGGAAQSVSEPTTADTCGWWATV 566
F+ S GG S+ + T CG W +
Sbjct: 208 FVLSRAGGLVNSLYQNATRKVCGVWKRI 235
>AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein.
Length = 257
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 77 TDVKVAPNFVFGETNKSED 133
++ ++P+ VFG+ KSED
Sbjct: 201 SEQSLSPDTVFGDDGKSED 219
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -1
Query: 174 SNAGTFPAGNFFKKSSDL 121
S GT+P+ N++ +SD+
Sbjct: 12 SQHGTYPSDNYYNYTSDI 29
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -1
Query: 174 SNAGTFPAGNFFKKSSDL 121
S GT+P+ N++ +SD+
Sbjct: 12 SQHGTYPSDNYYNYTSDI 29
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -1
Query: 174 SNAGTFPAGNFFKKSSDL 121
S GT+P+ N++ +SD+
Sbjct: 12 SQHGTYPSDNYYNYTSDI 29
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 263 PKPVSGSGHHGLTVN 307
P PV G G HGL V+
Sbjct: 38 PYPVPGLGLHGLPVD 52
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.4 bits (43), Expect = 7.5
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 410 KYWTDIFSHAPSLLPRESHLPMSLS-SVHCC 499
K + D+F+ + L+PR P+S S H C
Sbjct: 182 KVFVDLFNLSTFLIPRSYIPPLSTSMRSHLC 212
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 7.5
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 410 KYWTDIFSHAPSLLPRESHLPMSLS-SVHCC 499
K + D+F+ + L+PR P+S S H C
Sbjct: 342 KVFVDLFNLSTFLIPRSYIPPLSTSMRSHLC 372
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 7.5
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 410 KYWTDIFSHAPSLLPRESHLPMSLS-SVHCC 499
K + D+F+ + L+PR P+S S H C
Sbjct: 342 KVFVDLFNLSTFLIPRSYIPPLSTSMRSHLC 372
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 110 QIRNSVLLSHQSRNIVRRSTLYKRG 36
QIR + +SH+ N L++RG
Sbjct: 218 QIRGTFFVSHKYTNYSAVQDLHRRG 242
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 110 QIRNSVLLSHQSRNIVRRSTLYKRG 36
QIR + +SH+ N L++RG
Sbjct: 225 QIRGTFFVSHKYTNYSAVQDLHRRG 249
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 21.0 bits (42), Expect = 9.9
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 410 KYWTDIFSHAP 442
K+WTDI++ P
Sbjct: 501 KFWTDIYNSNP 511
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 21.0 bits (42), Expect = 9.9
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 410 KYWTDIFSHAP 442
K+WTDI++ P
Sbjct: 503 KFWTDIYNSNP 513
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,674
Number of Sequences: 336
Number of extensions: 3957
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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