Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20557
(714 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08574 Cluster: Cytochrome c1 heme protein, mitochondri... 134 2e-30
UniRef50_Q9VAM8 Cluster: CG14508-PA; n=4; Bilateria|Rep: CG14508... 134 2e-30
UniRef50_UPI0000DB762B Cluster: PREDICTED: similar to CG4769-PA;... 133 4e-30
UniRef50_UPI00015B54BE Cluster: PREDICTED: similar to transmembr... 121 2e-26
UniRef50_A7P7Q4 Cluster: Chromosome chr9 scaffold_7, whole genom... 120 3e-26
UniRef50_P25076 Cluster: Cytochrome c1 heme protein, mitochondri... 119 8e-26
UniRef50_P07143 Cluster: Cytochrome c1, heme protein, mitochondr... 118 1e-25
UniRef50_Q18853 Cluster: Putative uncharacterized protein cyc-1;... 107 3e-22
UniRef50_A7ATE9 Cluster: Cytochrome C1 protein, putative; n=7; A... 107 4e-22
UniRef50_A3WER2 Cluster: Cytochrome c1, heme protein; n=2; Eryth... 102 1e-20
UniRef50_Q2GDE1 Cluster: Ubiquinol-cytochrome c reductase, cytoc... 101 2e-20
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 98 2e-19
UniRef50_Q4N2G5 Cluster: Cytochrome c1, putative; n=3; Apicomple... 97 4e-19
UniRef50_Q4E7X7 Cluster: Ubiquinol-cytochrome c reductase, cytoc... 97 5e-19
UniRef50_A7HVC5 Cluster: Cytochrome c1 precursor; n=1; Parvibacu... 97 5e-19
UniRef50_Q8FZE4 Cluster: Ubiquinol-cytochrome c reductase, cytoc... 89 8e-17
UniRef50_Q4FPG7 Cluster: Ubiquinol-cytochrome-c reductase; n=3; ... 89 1e-16
UniRef50_Q0ARQ6 Cluster: Cytochrome c1 precursor; n=1; Maricauli... 87 5e-16
UniRef50_Q59ZQ5 Cluster: Likely cytochrome C1; n=1; Candida albi... 87 5e-16
UniRef50_Q9ZDQ4 Cluster: CYTOCHROME C1, HEME PROTEIN; n=15; Rick... 84 3e-15
UniRef50_P20114 Cluster: Cytochrome c1 heme protein; n=1; Euglen... 83 9e-15
UniRef50_Q6N0B8 Cluster: Cytochrome C1; n=2; Magnetospirillum gr... 79 1e-13
UniRef50_Q1GTG5 Cluster: Cytochrome c1 precursor; n=5; Sphingomo... 79 1e-13
UniRef50_UPI0001554D79 Cluster: PREDICTED: similar to cytochrome... 75 1e-12
UniRef50_Q4QIT8 Cluster: Cytochrome c1, heme protein, mitochondr... 73 5e-12
UniRef50_A3VTP6 Cluster: Ubiquinol-cytochrome c reductase, cytoc... 73 7e-12
UniRef50_Q9AAW8 Cluster: Ubiquinol-cytochrome c reductase, cytoc... 71 3e-11
UniRef50_Q0F3L9 Cluster: Cytochrome c1, heme protein; n=1; Marip... 64 2e-09
UniRef50_Q0C5B1 Cluster: Putative ubiquinol-cytochrome c reducta... 64 4e-09
UniRef50_P81379 Cluster: Cytochrome c1 precursor; n=1; Blastochl... 60 4e-08
UniRef50_A5G2Q4 Cluster: Cytochrome c1 precursor; n=1; Acidiphil... 60 5e-08
UniRef50_UPI00015C5732 Cluster: hypothetical protein CKO_01261; ... 57 4e-07
UniRef50_Q5FTF1 Cluster: Ubiquinol-cytochrome-c reductase; n=1; ... 57 5e-07
UniRef50_Q5NNX8 Cluster: Cytochrome c1; n=1; Zymomonas mobilis|R... 54 5e-06
UniRef50_A0DBS8 Cluster: Chromosome undetermined scaffold_442, w... 52 2e-05
UniRef50_P13627 Cluster: Cytochrome c1 precursor; n=8; Bacteria|... 48 2e-04
UniRef50_Q02760 Cluster: Cytochrome c1 precursor; n=13; Rhodobac... 47 5e-04
UniRef50_A0L4I9 Cluster: Cytochrome c1 precursor; n=1; Magnetoco... 43 0.009
UniRef50_Q2HYN0 Cluster: Cytochrome c-1 isoform; n=1; Ictalurus ... 40 0.061
UniRef50_Q1GCS2 Cluster: Cytochrome c1; n=10; Alphaproteobacteri... 39 0.11
UniRef50_Q31GY5 Cluster: Ubiquinol:cytochrome c oxidoreductase (... 36 0.99
UniRef50_O67706 Cluster: Uncharacterized protein aq_1854 precurs... 36 0.99
UniRef50_UPI0000DAE79F Cluster: hypothetical protein Rgryl_01001... 36 1.3
UniRef50_A1ZIW5 Cluster: Methylamine utilization protein MauG; n... 36 1.3
UniRef50_O31216 Cluster: Cytochrome c1 precursor; n=16; Gammapro... 36 1.3
UniRef50_Q2UN86 Cluster: Predicted protein; n=6; Trichocomaceae|... 35 1.7
UniRef50_Q7NQX9 Cluster: Ubiquinol-cytochrome c reductase; n=15;... 35 2.3
UniRef50_Q9PPY9 Cluster: DNA helicase II; n=1; Ureaplasma parvum... 34 3.0
UniRef50_Q676U5 Cluster: Autophagy-related protein 16-1; n=64; C... 34 4.0
UniRef50_A4AN07 Cluster: Cytochrome c, class I; n=5; Flavobacter... 33 5.3
UniRef50_Q755B8 Cluster: AFL095Wp; n=2; Eremothecium gossypii|Re... 33 5.3
UniRef50_Q2UST1 Cluster: ATP-dependent RNA helicase mss116, mito... 33 5.3
UniRef50_Q7UV57 Cluster: Probable fimbrial assembly protein PilM... 33 7.0
UniRef50_Q3JEC0 Cluster: Cytochrome c1 precursor; n=1; Nitrosoco... 33 7.0
UniRef50_Q0UHX0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q606Q5 Cluster: Ubiquinol--cytochrome c reductase, cyto... 33 9.2
UniRef50_A4BV27 Cluster: Cytochrome c5; n=2; Nitrococcus mobilis... 33 9.2
>UniRef50_P08574 Cluster: Cytochrome c1 heme protein, mitochondrial
precursor; n=45; Eukaryota|Rep: Cytochrome c1 heme
protein, mitochondrial precursor - Homo sapiens (Human)
Length = 325
Score = 134 bits (325), Expect = 2e-30
Identities = 58/97 (59%), Positives = 74/97 (76%)
Frame = +2
Query: 218 PTSQPLESQWLVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 397
P S P + L+ SLDH S+RRG++VYKQVC +CHS+ ++A+R+LV V +TEDEAK AA
Sbjct: 91 PPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAA 150
Query: 398 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARA 508
EV ++DGP+E+G F RPGKL DY P PYPN AARA
Sbjct: 151 EVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARA 187
Score = 98.3 bits (234), Expect = 2e-19
Identities = 43/76 (56%), Positives = 53/76 (69%)
Frame = +1
Query: 484 PQ*KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPG 663
P + +NNGA PPDLS I R GGEDY+F+LLTGY EPP GV LREG +NPYFPG
Sbjct: 180 PNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPG 239
Query: 664 GAISMAQVLFDEAAEY 711
AI+MA ++ + E+
Sbjct: 240 QAIAMAPPIYTDVLEF 255
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/76 (40%), Positives = 39/76 (51%)
Frame = +3
Query: 21 GRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALEQSVQA 200
G +C AR + L PQA LS+ + G ++ RKV LS L L AL +V A
Sbjct: 27 GLLCSARP-GQLPLRTPQAVALSSKS-GLSRGRKVMLSALGMLAAGGAGLAVALHSAVSA 84
Query: 201 SGSEAHPPHNPWNHSG 248
S E HPP PW+H G
Sbjct: 85 SDLELHPPSYPWSHRG 100
>UniRef50_Q9VAM8 Cluster: CG14508-PA; n=4; Bilateria|Rep: CG14508-PA
- Drosophila melanogaster (Fruit fly)
Length = 344
Score = 134 bits (324), Expect = 2e-30
Identities = 60/97 (61%), Positives = 74/97 (76%)
Frame = +2
Query: 218 PTSQPLESQWLVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 397
P Q + L+ +LD SVRRGY VYK+VC +CHSLQY+A+RNLV V TE EAKAEA
Sbjct: 75 PAHQHWNHKGLLSALDKESVRRGYTVYKEVCSSCHSLQYMAYRNLVGVCMTEAEAKAEAE 134
Query: 398 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARA 508
+ ++DGP+EEG Y+ERPGKLSD+ PSPY NE AAR+
Sbjct: 135 AITVRDGPNEEGEYYERPGKLSDHFPSPYANEEAARS 171
Score = 100 bits (240), Expect = 3e-20
Identities = 42/68 (61%), Positives = 54/68 (79%)
Frame = +1
Query: 508 SNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAISMAQV 687
+NNG+YPPDLS I S RKGGEDY+F+LLTGY +PPAG LR+G +NPYF GGAI+M +V
Sbjct: 172 ANNGSYPPDLSYIVSARKGGEDYVFSLLTGYCDPPAGFALRDGLYFNPYFSGGAIAMGKV 231
Query: 688 LFDEAAEY 711
+ +E +
Sbjct: 232 VDNEVVSF 239
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 102 GWTKNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSG 248
G+T NRK+ L L L++ALE SV AS HP H WNH G
Sbjct: 37 GFTGNRKL-LGALGALTGTAGLLIYALETSVDASSDCVHPAHQHWNHKG 84
>UniRef50_UPI0000DB762B Cluster: PREDICTED: similar to CG4769-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG4769-PA
- Apis mellifera
Length = 351
Score = 133 bits (322), Expect = 4e-30
Identities = 55/93 (59%), Positives = 74/93 (79%)
Frame = +2
Query: 230 PLESQWLVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMI 409
P + ++ DHA++RRG++VY+ VC+ CHSLQYI F +L+NVTH+ +E K A+E +
Sbjct: 35 PWSFNGVFKAFDHAALRRGWQVYRTVCRTCHSLQYIRFLDLINVTHSLEEVKQIASEFEV 94
Query: 410 KDGPDEEGNYFERPGKLSDYLPSPYPNENAARA 508
+DGPD+EGNYF RPGKLSDY+PSPYPNE AA+A
Sbjct: 95 EDGPDDEGNYFTRPGKLSDYIPSPYPNEEAAKA 127
Score = 85.4 bits (202), Expect = 1e-15
Identities = 36/76 (47%), Positives = 51/76 (67%)
Frame = +1
Query: 484 PQ*KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPG 663
P + +N GAYPPDL+ + ++ G DY+F+LLTG+M+PPAGV E Q +N YFPG
Sbjct: 120 PNEEAAKAANFGAYPPDLTYMILAQRDGVDYVFSLLTGWMDPPAGVESEENQYFNAYFPG 179
Query: 664 GAISMAQVLFDEAAEY 711
G +M Q+L + A +Y
Sbjct: 180 GRTTMPQMLMEGAVDY 195
>UniRef50_UPI00015B54BE Cluster: PREDICTED: similar to transmembrane
and tetratricopeptide repeat containing 4; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to transmembrane and
tetratricopeptide repeat containing 4 - Nasonia
vitripennis
Length = 1262
Score = 121 bits (292), Expect = 2e-26
Identities = 52/97 (53%), Positives = 72/97 (74%)
Frame = +2
Query: 218 PTSQPLESQWLVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 397
P P + + SLDH+++RRG++VYK VC ACHS++Y++F++LV+V TE+EA+ AA
Sbjct: 358 PADHPWTFRGALSSLDHSAIRRGWQVYKTVCSACHSIKYVSFKDLVDVCFTEEEARDIAA 417
Query: 398 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARA 508
E ++DGPDE G Y RP KL D +PSPYPNE +ARA
Sbjct: 418 EYEVEDGPDENGEYSTRPCKLPDRVPSPYPNEESARA 454
Score = 96.3 bits (229), Expect = 7e-19
Identities = 42/76 (55%), Positives = 53/76 (69%)
Frame = +1
Query: 484 PQ*KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPG 663
P + +NNGAYP DLS + + R G DY+F LLTGY EPPAGV LR+GQ +NPYF G
Sbjct: 447 PNEESARAANNGAYPVDLSYVVNARPRGRDYVFGLLTGYTEPPAGVELRDGQAFNPYFEG 506
Query: 664 GAISMAQVLFDEAAEY 711
G+I MA++L D +Y
Sbjct: 507 GSIGMAEMLQDGLVDY 522
>UniRef50_A7P7Q4 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 421
Score = 120 bits (290), Expect = 3e-26
Identities = 52/92 (56%), Positives = 68/92 (73%)
Frame = +2
Query: 230 PLESQWLVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMI 409
P ++ S DHAS+RRG++VY+QVC +CHS+ I+FR+LV V +TE+E KA AAE+ +
Sbjct: 191 PWPHSGILSSYDHASIRRGHQVYQQVCASCHSMSLISFRDLVGVAYTEEETKAMAAEIEV 250
Query: 410 KDGPDEEGNYFERPGKLSDYLPSPYPNENAAR 505
DGP++EG F RPGKLSD P PY NE AAR
Sbjct: 251 DDGPNDEGEMFTRPGKLSDRFPQPYANEQAAR 282
Score = 104 bits (250), Expect = 2e-21
Identities = 44/68 (64%), Positives = 55/68 (80%)
Frame = +1
Query: 508 SNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAISMAQV 687
+N GAYPPDLSLI R G++Y+FALLTGY +PPAGV +R+G +YNPYFPGGAI+M ++
Sbjct: 284 ANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIRDGLHYNPYFPGGAIAMPKM 343
Query: 688 LFDEAAEY 711
L D A EY
Sbjct: 344 LIDGAVEY 351
>UniRef50_P25076 Cluster: Cytochrome c1 heme protein, mitochondrial
precursor; n=12; Viridiplantae|Rep: Cytochrome c1 heme
protein, mitochondrial precursor - Solanum tuberosum
(Potato)
Length = 320
Score = 119 bits (286), Expect = 8e-26
Identities = 51/92 (55%), Positives = 69/92 (75%)
Frame = +2
Query: 230 PLESQWLVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMI 409
P + ++ S DHAS+RRG++VY+QVC +CHS+ I++R+LV V +TE+E KA AAE+ +
Sbjct: 90 PWPHEGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEV 149
Query: 410 KDGPDEEGNYFERPGKLSDYLPSPYPNENAAR 505
DGP++EG F RPGKLSD P PY NE AAR
Sbjct: 150 VDGPNDEGEMFTRPGKLSDRFPQPYANEAAAR 181
Score = 102 bits (244), Expect = 1e-20
Identities = 44/68 (64%), Positives = 54/68 (79%)
Frame = +1
Query: 508 SNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAISMAQV 687
+N GAYPPDLSLI R G++Y+FALLT Y +PPAGV +REG +YNPYFPGGAI+M ++
Sbjct: 183 ANGGAYPPDLSLITKARHNGQNYVFALLTAYRDPPAGVSIREGLHYNPYFPGGAIAMPKM 242
Query: 688 LFDEAAEY 711
L D A EY
Sbjct: 243 LNDGAVEY 250
>UniRef50_P07143 Cluster: Cytochrome c1, heme protein, mitochondrial
precursor; n=42; Eukaryota|Rep: Cytochrome c1, heme
protein, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 309
Score = 118 bits (285), Expect = 1e-25
Identities = 51/84 (60%), Positives = 64/84 (76%)
Frame = +2
Query: 257 SLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGN 436
+ DHAS+RRGY+VY++VC ACHSL +A+R LV V+HT +E + A E D PDE+GN
Sbjct: 84 TFDHASIRRGYQVYREVCAACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEPDEQGN 143
Query: 437 YFERPGKLSDYLPSPYPNENAARA 508
+RPGKLSDY+P PYPNE AARA
Sbjct: 144 PKKRPGKLSDYIPGPYPNEQAARA 167
Score = 104 bits (250), Expect = 2e-21
Identities = 49/77 (63%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +1
Query: 484 PQ*KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYM-EPPAGVVLREGQNYNPYFP 660
P + +N GA PPDLSLI R GG DYIF+LLTGY EPPAGV L G NYNPYFP
Sbjct: 160 PNEQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGVALPPGSNYNPYFP 219
Query: 661 GGAISMAQVLFDEAAEY 711
GG+I+MA+VLFD+ EY
Sbjct: 220 GGSIAMARVLFDDMVEY 236
>UniRef50_Q18853 Cluster: Putative uncharacterized protein cyc-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cyc-1 - Caenorhabditis elegans
Length = 285
Score = 107 bits (257), Expect = 3e-22
Identities = 47/76 (61%), Positives = 57/76 (75%)
Frame = +1
Query: 484 PQ*KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPG 663
P K + +NNGA PPDLSL+ R GG+DY+F+LLTGY+E PAGV + +G+ YNPYFPG
Sbjct: 132 PNKKAAAAANNGAAPPDLSLMALARHGGDDYVFSLLTGYLEAPAGVKVDDGKAYNPYFPG 191
Query: 664 GAISMAQVLFDEAAEY 711
G ISM Q LFDE EY
Sbjct: 192 GIISMPQQLFDEGIEY 207
Score = 107 bits (256), Expect = 4e-22
Identities = 49/84 (58%), Positives = 65/84 (77%)
Frame = +2
Query: 257 SLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGN 436
S D ASVRRGYEVYKQVC ACHS++++ +R+ V+ TE+EAKAEAA+ +I D D++G
Sbjct: 57 SFDIASVRRGYEVYKQVCAACHSMKFLHYRHFVDTIMTEEEAKAEAADALIND-VDDKGA 115
Query: 437 YFERPGKLSDYLPSPYPNENAARA 508
+RPG L+D LP+PYPN+ AA A
Sbjct: 116 SIQRPGMLTDKLPNPYPNKKAAAA 139
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +3
Query: 168 LLFALEQSVQASGSEAHPPHNPWNHSGWFA 257
L++ALE SV ASG HP PW HSG F+
Sbjct: 27 LVYALENSVSASGDNVHPYALPWAHSGPFS 56
>UniRef50_A7ATE9 Cluster: Cytochrome C1 protein, putative; n=7;
Aconoidasida|Rep: Cytochrome C1 protein, putative -
Babesia bovis
Length = 397
Score = 107 bits (256), Expect = 4e-22
Identities = 47/81 (58%), Positives = 58/81 (71%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYF 442
D SVRRGYEVY+QVC CHS+QY+ FR+L N + E+ AK A E ++DGP++EG F
Sbjct: 175 DIGSVRRGYEVYRQVCATCHSMQYLRFRHLANEVYPEERAKEIAEEYEVQDGPNDEGEMF 234
Query: 443 ERPGKLSDYLPSPYPNENAAR 505
RPG L+D PSPYPN AAR
Sbjct: 235 MRPGILTDPFPSPYPNAEAAR 255
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/76 (52%), Positives = 50/76 (65%)
Frame = +1
Query: 484 PQ*KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPG 663
P + +N GA PPDLSL+ S RK G DY+FALLTGY +PP G+ LR+G +N YF G
Sbjct: 249 PNAEAARYANGGAIPPDLSLMASARKTGPDYLFALLTGYCDPPEGIELRQGLYFNTYFTG 308
Query: 664 GAISMAQVLFDEAAEY 711
G+I+M L D EY
Sbjct: 309 GSIAMPPPLEDGMVEY 324
>UniRef50_A3WER2 Cluster: Cytochrome c1, heme protein; n=2;
Erythrobacter|Rep: Cytochrome c1, heme protein -
Erythrobacter sp. NAP1
Length = 284
Score = 102 bits (244), Expect = 1e-20
Identities = 44/82 (53%), Positives = 61/82 (74%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYF 442
D+A ++RGY+VYK+VC ACHSL+Y+AFRNL + +TEDE +AEAA M+ +++G+
Sbjct: 65 DYAQLQRGYQVYKEVCSACHSLKYVAFRNLEQIGYTEDEVRAEAATWMVPGIDEKDGSVI 124
Query: 443 ERPGKLSDYLPSPYPNENAARA 508
ERPG +D PSPY N+ ARA
Sbjct: 125 ERPGLPTDQFPSPYANDIEARA 146
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Frame = +1
Query: 511 NNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLRE-------GQNYNPYFPGGA 669
NN A PPDLSLI RK G Y+++L+ GY EP V + G +N YF
Sbjct: 148 NNNAIPPDLSLITKARKDGVHYVYSLMQGYNEPDPEDVAKSPNFETPPGLYFNEYFYNIN 207
Query: 670 ISMAQVLFDEAAEYS 714
I+M L D YS
Sbjct: 208 IAMPPQLLDGIVSYS 222
>UniRef50_Q2GDE1 Cluster: Ubiquinol-cytochrome c reductase,
cytochrome c1; n=1; Neorickettsia sennetsu str.
Miyayama|Rep: Ubiquinol-cytochrome c reductase,
cytochrome c1 - Neorickettsia sennetsu (strain Miyayama)
Length = 256
Score = 101 bits (241), Expect = 2e-20
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +2
Query: 257 SLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGN 436
+ D +++RG +VY+QVC ACHSL I+FR+L+ T +EAK A+E +KDGP+++G
Sbjct: 41 TFDKQAIKRGLKVYQQVCAACHSLNRISFRHLLGAGFTPEEAKLIASEYQVKDGPNDDGE 100
Query: 437 YFERPGKLSDYLPSPYPNENAARA 508
Y+ERPG LSDY PY N AA A
Sbjct: 101 YYERPGMLSDYFVPPYANRKAAEA 124
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/73 (45%), Positives = 43/73 (58%)
Frame = +1
Query: 493 KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAI 672
K +NN AYPPDLSLI GR GG +Y+++LL G+ + A EG NPYF G I
Sbjct: 120 KAAEAANNAAYPPDLSLIARGRIGGANYLYSLLIGFTDDEA----PEGLYSNPYFSTGKI 175
Query: 673 SMAQVLFDEAAEY 711
+MA L ++ Y
Sbjct: 176 AMAPPLSEDIVSY 188
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 98.3 bits (234), Expect = 2e-19
Identities = 43/85 (50%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNV---THTEDEAKAEAAEVMIKDGPDEEG 433
D +++RG +VYK+VC +CH L YIAFRNL +++ + A A++ IKDGP++ G
Sbjct: 456 DRGALQRGLKVYKEVCASCHGLSYIAFRNLAEAGGPSYSVAQVAAFASDYKIKDGPNDAG 515
Query: 434 NYFERPGKLSDYLPSPYPNENAARA 508
+ FERPG+ +DY PSP+PNE AARA
Sbjct: 516 DMFERPGRPADYFPSPFPNEQAARA 540
Score = 53.2 bits (122), Expect = 6e-06
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 19/95 (20%)
Frame = +1
Query: 484 PQ*KCGSCSNNGAYPPDLSLICSGR------------------KGGEDYIFALLTGYMEP 609
P + +N GA PPDLSLI R + G DY+ A+L G+ E
Sbjct: 533 PNEQAARAANGGAAPPDLSLITKARSYGRGFPWFIFDFFTQYQEQGPDYVSAVLQGFEEK 592
Query: 610 -PAGVVLREGQNYNPYFPGGAISMAQVLFDEAAEY 711
P GV + EG YN YFPG AI M + L D Y
Sbjct: 593 VPEGVTIPEGSYYNKYFPGHAIKMPKPLSDGQVTY 627
>UniRef50_Q4N2G5 Cluster: Cytochrome c1, putative; n=3;
Apicomplexa|Rep: Cytochrome c1, putative - Theileria
parva
Length = 396
Score = 97.1 bits (231), Expect = 4e-19
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Frame = +2
Query: 218 PTSQPLESQWLVRSL---DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKA 388
P + P+ W L D SVRRGYEVY+QVC CHSL Y+ FR+L++ + ++ K
Sbjct: 156 PPTPPVYPFWFKNVLHGHDIPSVRRGYEVYRQVCATCHSLNYLKFRHLIDEVYPLEKVKE 215
Query: 389 EAAEVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAAR 505
AAE I+DGP+E+G + RP +D P+PYPN AAR
Sbjct: 216 IAAEYEIEDGPNEQGEMYSRPRIPTDPFPAPYPNSEAAR 254
Score = 87.4 bits (207), Expect = 3e-16
Identities = 41/76 (53%), Positives = 51/76 (67%)
Frame = +1
Query: 484 PQ*KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPG 663
P + +NNGA PPDL+L+ S R+ G DYIF+LLTGY EPP G LR G ++N YF G
Sbjct: 248 PNSEAARYANNGAIPPDLTLMSSARRNGPDYIFSLLTGYSEPPEGFELRPGLHFNNYFNG 307
Query: 664 GAISMAQVLFDEAAEY 711
G+ISMA L D E+
Sbjct: 308 GSISMAPPLEDGMLEF 323
>UniRef50_Q4E7X7 Cluster: Ubiquinol-cytochrome c reductase,
cytochrome c1; n=11; Rickettsiales|Rep:
Ubiquinol-cytochrome c reductase, cytochrome c1 -
Wolbachia endosymbiont of Drosophila simulans
Length = 375
Score = 96.7 bits (230), Expect = 5e-19
Identities = 42/87 (48%), Positives = 60/87 (68%)
Frame = +2
Query: 248 LVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDE 427
+V S D S++RGY+VYK+VC ACHS+ +AFRNL +V +E++ K AA +KDGP++
Sbjct: 161 IVGSFDRESIQRGYKVYKEVCAACHSMNRVAFRNLQDVGFSEEDVKQIAASYQVKDGPND 220
Query: 428 EGNYFERPGKLSDYLPSPYPNENAARA 508
G F+RPG SDY +P+ + AA A
Sbjct: 221 LGEMFDRPGVPSDYFIAPFDTKEAAAA 247
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/73 (42%), Positives = 41/73 (56%)
Frame = +1
Query: 493 KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAI 672
+ + SNNGA PPDLSLI R G +Y+++LLTGY G +N YFP G +
Sbjct: 243 EAAAASNNGAVPPDLSLIIKARHDGANYVYSLLTGYQN---GEHDENDLYFNSYFPTGRL 299
Query: 673 SMAQVLFDEAAEY 711
+MA L + EY
Sbjct: 300 AMAPPLSEGMVEY 312
>UniRef50_A7HVC5 Cluster: Cytochrome c1 precursor; n=1; Parvibaculum
lavamentivorans DS-1|Rep: Cytochrome c1 precursor -
Parvibaculum lavamentivorans DS-1
Length = 262
Score = 96.7 bits (230), Expect = 5e-19
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 7/101 (6%)
Frame = +2
Query: 227 QPLESQWLVRSL----DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNV---THTEDEAK 385
+P+ W + D ++RRGY+VYK+VC CHS++Y+ FRNL +E + K
Sbjct: 36 EPIHVDWSFEGMFGTYDRDALRRGYKVYKEVCAVCHSMEYVKFRNLAEPGGPEFSEGQVK 95
Query: 386 AEAAEVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARA 508
A AAE+ + DGPD G+ +ERPG+ D PSPYPN A+ A
Sbjct: 96 ALAAEITVVDGPDSAGDMYERPGEPKDAFPSPYPNPEASAA 136
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/65 (49%), Positives = 39/65 (60%)
Frame = +1
Query: 517 GAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAISMAQVLFD 696
GA PDLSL+ R GG DY+++LL GY E P G L G +YN YFPG I+M L D
Sbjct: 139 GAAAPDLSLMTKARPGGPDYVYSLLMGYEEAPEGFELTTG-SYNLYFPGHQIAMPPPLSD 197
Query: 697 EAAEY 711
+Y
Sbjct: 198 GQVDY 202
>UniRef50_Q8FZE4 Cluster: Ubiquinol-cytochrome c reductase,
cytochrome c1, putative; n=17; Rhizobiales|Rep:
Ubiquinol-cytochrome c reductase, cytochrome c1,
putative - Brucella suis
Length = 295
Score = 89.4 bits (212), Expect = 8e-17
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Frame = +2
Query: 218 PTSQPLESQWLVR----SLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAK 385
P P + W + D ++RG +VYK+VC ACHS+ +AFR L + ++ ++ K
Sbjct: 46 PIHHPKQESWSFAGPFGTYDKGQLQRGLKVYKEVCSACHSMNLVAFRTLEGLGYSPEQVK 105
Query: 386 AEAAEVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARA 508
A AAE ++DGP+ +G F R +D+ P+PYPN NAA A
Sbjct: 106 ALAAEYEVEDGPNADGEMFTRAALPTDHFPAPYPNANAAAA 146
Score = 64.5 bits (150), Expect = 2e-09
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 20/96 (20%)
Frame = +1
Query: 484 PQ*KCGSCSNNGAYPPDLSLICSGR------------------KGGEDYIFALLTGYME- 606
P + +NNGA PPDLSLI R +GG DYI +LLTG+ E
Sbjct: 139 PNANAAAAANNGAAPPDLSLIAKARSVERGFPQFIFDIFTQYAEGGPDYIHSLLTGFDEQ 198
Query: 607 PPAGVVLREGQNYNPYF-PGGAISMAQVLFDEAAEY 711
PPAG+ + EG +YNPYF A++MA+ L DE Y
Sbjct: 199 PPAGMQIAEGTHYNPYFISAKALAMAKPLSDEQVTY 234
>UniRef50_Q4FPG7 Cluster: Ubiquinol-cytochrome-c reductase; n=3;
Bacteria|Rep: Ubiquinol-cytochrome-c reductase -
Pelagibacter ubique
Length = 259
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Frame = +2
Query: 233 LESQWLVRSL----DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNV---THTEDEAKAE 391
L++ W + L D S++RGY+VY +VC +CHS++Y+++RNL TE++AKA
Sbjct: 30 LKTDWSFKGLFGKFDRGSLQRGYQVYTEVCASCHSMKYVSYRNLFEPGGPEFTEEQAKAI 89
Query: 392 AAEVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARA 508
AA + DGP+ +G F RP KLSD PY N AA+A
Sbjct: 90 AASFEVTDGPNNDGEMFVRPAKLSDKFVMPYENVKAAQA 128
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/74 (48%), Positives = 47/74 (63%)
Frame = +1
Query: 493 KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAI 672
K +N GAYPPD+S++ R GG DYI++LL GY +PP+GV L +G YN + G I
Sbjct: 124 KAAQAANGGAYPPDMSVLAKARTGGVDYIYSLLLGYEDPPSGVTLDDGVYYNKFMYGNNI 183
Query: 673 SMAQVLFDEAAEYS 714
MA+ L D EYS
Sbjct: 184 KMAEPLSDGLVEYS 197
>UniRef50_Q0ARQ6 Cluster: Cytochrome c1 precursor; n=1; Maricaulis
maris MCS10|Rep: Cytochrome c1 precursor - Maricaulis
maris (strain MCS10)
Length = 269
Score = 86.6 bits (205), Expect = 5e-16
Identities = 40/69 (57%), Positives = 48/69 (69%)
Frame = +1
Query: 508 SNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAISMAQV 687
SN GAYPPDLSLI R GGE+Y+++LLTGY + P L GQ YNPYF GGAI+MA
Sbjct: 141 SNGGAYPPDLSLIVKARTGGENYLYSLLTGYEDAPEDSHLAAGQYYNPYFAGGAIAMAPP 200
Query: 688 LFDEAAEYS 714
L + EY+
Sbjct: 201 LAEGIIEYA 209
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLV--------------NVTHTEDEAKAEAAE 400
D ++V+RGY++Y++VC +CHS+ + FRNL N + A
Sbjct: 45 DTSAVQRGYQIYQEVCASCHSMDLMRFRNLAQQGGPFASDMYPNPNDNPIVMQIAASYTR 104
Query: 401 VMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARA 508
V +D +++G+ ER G SD P+P+ N+ ARA
Sbjct: 105 VWNQDEVNDDGDPVERAGLPSDAFPAPFANQQMARA 140
>UniRef50_Q59ZQ5 Cluster: Likely cytochrome C1; n=1; Candida
albicans|Rep: Likely cytochrome C1 - Candida albicans
(Yeast)
Length = 130
Score = 86.6 bits (205), Expect = 5e-16
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +2
Query: 248 LVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDE 427
+ + DHAS+RRG++VY++VC ACHSL IA+RNLV V+HT EAKA A E+ D PD+
Sbjct: 62 MFETFDHASIRRGFQVYREVCAACHSLDRIAWRNLVGVSHTTSEAKAMAEELEYDDEPDD 121
Query: 428 EGNYFERP 451
EG +RP
Sbjct: 122 EGKPRKRP 129
>UniRef50_Q9ZDQ4 Cluster: CYTOCHROME C1, HEME PROTEIN; n=15;
Rickettsiales|Rep: CYTOCHROME C1, HEME PROTEIN -
Rickettsia prowazekii
Length = 253
Score = 84.2 bits (199), Expect = 3e-15
Identities = 35/83 (42%), Positives = 53/83 (63%)
Frame = +2
Query: 257 SLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGN 436
+++ + +RG++VYK+VC CH L + +RNL ++ ++DE K A +KDGP+++G
Sbjct: 42 TVNREAAQRGFQVYKEVCSVCHGLNNLYYRNLKDIGFSDDEIKEIAKGYTVKDGPNDDGE 101
Query: 437 YFERPGKLSDYLPSPYPNENAAR 505
FERP D PYPNE AAR
Sbjct: 102 MFERPALPYDRFVPPYPNEQAAR 124
Score = 77.0 bits (181), Expect = 4e-13
Identities = 36/68 (52%), Positives = 42/68 (61%)
Frame = +1
Query: 508 SNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAISMAQV 687
+NNGA PPDLSLI R G +YI++LLT Y EPPA + G YNPYFPG I+M
Sbjct: 126 ANNGANPPDLSLIIKARYDGANYIYSLLTSYTEPPAYFKMMHGTYYNPYFPGAQIAMPPP 185
Query: 688 LFDEAAEY 711
L D Y
Sbjct: 186 LTDGQVTY 193
>UniRef50_P20114 Cluster: Cytochrome c1 heme protein; n=1; Euglena
gracilis|Rep: Cytochrome c1 heme protein - Euglena
gracilis
Length = 243
Score = 82.6 bits (195), Expect = 9e-15
Identities = 41/69 (59%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +1
Query: 508 SNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEP-PAGVVLREGQNYNPYFPGGAISMAQ 684
+NNGA PPDLS+I + R GG DYI+ALLTGY P P GV L Q YNPYF GG I M
Sbjct: 102 ANNGALPPDLSVITNARHGGVDYIYALLTGYGRPVPGGVQLSTTQWYNPYFHGGIIGMPP 161
Query: 685 VLFDEAAEY 711
L D+ EY
Sbjct: 162 PLTDDMIEY 170
Score = 77.4 bits (182), Expect = 3e-13
Identities = 44/102 (43%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Frame = +2
Query: 203 GL*SSPTSQPLES-QWLVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDE 379
G+ S P + P QW + LD SVRRG EVY+QV CHSL +I +R+ +++E
Sbjct: 1 GVDSHPPALPWPHFQWF-QGLDWRSVRRGKEVYEQVFAPCHSLSFIKYRHF-EAFMSKEE 58
Query: 380 AKAEAAEVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAAR 505
K AA + D PDE+G +RPGK D + PY NE AR
Sbjct: 59 VKNMAASFEVDDDPDEKGEARKRPGKRFDTVVQPYKNEQEAR 100
>UniRef50_Q6N0B8 Cluster: Cytochrome C1; n=2; Magnetospirillum
gryphiswaldense|Rep: Cytochrome C1 - Magnetospirillum
gryphiswaldense
Length = 537
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +1
Query: 484 PQ*KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYM-EPPAGVVLREGQNYNPYFP 660
P K + +N GA PPDLSL+ R GG +YI++L+ G+ E P GVV+ EG+ YN YFP
Sbjct: 401 PNDKAAAAANGGALPPDLSLMAKARVGGPNYIYSLMLGFKEEAPHGVVIPEGKYYNTYFP 460
Query: 661 GGAISMAQVLFDEAAEYS 714
G AI M L ++ YS
Sbjct: 461 GNAIGMPPQLMEDLITYS 478
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYF 442
D A ++RG+EV+ QVC CH L+ +A+RNL V T D+ K AA + D P++EG
Sbjct: 327 DQAELKRGFEVFNQVCSNCHGLRLVAYRNLSAVGLTADQIKDVAAAREVADAPNDEGIVS 386
Query: 443 ERPGKLSDYLPSPYPNENAARA 508
R G+ SD +P+PN+ AA A
Sbjct: 387 MRAGRASDKYINPFPNDKAAAA 408
>UniRef50_Q1GTG5 Cluster: Cytochrome c1 precursor; n=5;
Sphingomonadales|Rep: Cytochrome c1 precursor -
Sphingopyxis alaskensis (Sphingomonas alaskensis)
Length = 269
Score = 79.0 bits (186), Expect = 1e-13
Identities = 40/97 (41%), Positives = 56/97 (57%)
Frame = +2
Query: 218 PTSQPLESQWLVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 397
P L S L+ D A ++RG +VYK+VC ACHSL +AFRN+ ++ +TE + K+ A
Sbjct: 40 PRHLKLASDGLMPHWDLAQLQRGMQVYKEVCSACHSLNLVAFRNIQDLGYTEGQVKSFAK 99
Query: 398 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARA 508
+ + G R G SD+ P+PY NE AARA
Sbjct: 100 GFQVPSINPDTGEPATRDGLPSDHFPAPYANEVAARA 136
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Frame = +1
Query: 508 SNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGV--VLREGQ--NYNPYFPGGAIS 675
+NN A PPDLSLI R+GG+DY+++LLTGY PPA + LR G +YNPYFP ++
Sbjct: 137 ANNNALPPDLSLITKAREGGKDYVYSLLTGYQNPPANLPKELRPGTGLHYNPYFPNLNLA 196
Query: 676 MAQVLFDEAAEYS 714
MA+ L D Y+
Sbjct: 197 MAKPLSDGQVTYA 209
>UniRef50_UPI0001554D79 Cluster: PREDICTED: similar to cytochrome
c1, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to cytochrome c1, partial -
Ornithorhynchus anatinus
Length = 570
Score = 75.4 bits (177), Expect = 1e-12
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +1
Query: 562 GGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAISMAQVLFDEAAEY 711
GGEDY+F+LLTGY +PP GV LREG +NPYFPG AI MA +++E E+
Sbjct: 2 GGEDYVFSLLTGYCDPPTGVSLREGLYFNPYFPGQAIGMAPPIYNEVLEF 51
>UniRef50_Q4QIT8 Cluster: Cytochrome c1, heme protein,
mitochondrial, putative; n=7; Kinetoplastida|Rep:
Cytochrome c1, heme protein, mitochondrial, putative -
Leishmania major
Length = 258
Score = 73.3 bits (172), Expect = 5e-12
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 SLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEV-MIKDGPDEEG 433
SLD SVRRG ++Y +V CHSL + F + T +E K A++ MI PD EG
Sbjct: 26 SLDWPSVRRGRQIYTEVFAPCHSLGRMTFTHFQGFM-TREEIKQLASQYEMIDSEPDAEG 84
Query: 434 NYFERPGKLSDYLPSPYPNENAAR 505
N RPGK +D LP+PYPN+ AA+
Sbjct: 85 NLNRRPGKPTDTLPTPYPNQRAAQ 108
Score = 67.3 bits (157), Expect = 4e-10
Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +1
Query: 484 PQ*KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGY-------ME-PPAGVVLREGQ 639
P + +NNGA PPDL G++GG DYIF+L+TGY ME PP L+ GQ
Sbjct: 102 PNQRAAQFANNGAEPPDLQHAVFGKEGGSDYIFSLVTGYNWGNGELMEVPPFAPELKPGQ 161
Query: 640 NYNPYFPGGAISMAQVLFDEAAEY 711
+NPYF G +SM L D +Y
Sbjct: 162 FWNPYFKGCVLSMPPPLSDGLVDY 185
>UniRef50_A3VTP6 Cluster: Ubiquinol-cytochrome c reductase,
cytochrome c1; n=1; Parvularcula bermudensis
HTCC2503|Rep: Ubiquinol-cytochrome c reductase,
cytochrome c1 - Parvularcula bermudensis HTCC2503
Length = 319
Score = 72.9 bits (171), Expect = 7e-12
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 23/113 (20%)
Frame = +2
Query: 239 SQWLVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNL---------------VNVTHTE 373
S + S D A ++RG++VY+QVC +CHS++ +AFR+L + + T
Sbjct: 40 SDGIFGSYDQAQLQRGFQVYQQVCSSCHSMRLVAFRHLAERGAPYYLDRCPEGLGIPETT 99
Query: 374 D--------EAKAEAAEVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARA 508
D K+ AA + DGPD+ G+ F+R G ++DYLPSPY N A A
Sbjct: 100 DCSLPTQNPVVKSLAASFQVTDGPDDAGDMFQRAGLVADYLPSPYANRQQAMA 152
Score = 66.1 bits (154), Expect = 8e-10
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = +1
Query: 508 SNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAISMAQ 684
+N GAYPPD+SL+ R G YI++LL GY EPPA + + GQ YN Y+ G ++ +
Sbjct: 153 ANGGAYPPDMSLLVKARHHGASYIYSLLQGYAEPPAAIDVPAGQYYNVYYAGDTTALVR 211
>UniRef50_Q9AAW8 Cluster: Ubiquinol-cytochrome c reductase,
cytochrome c1; n=2; Caulobacter|Rep:
Ubiquinol-cytochrome c reductase, cytochrome c1 -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 281
Score = 70.9 bits (166), Expect = 3e-11
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +1
Query: 508 SNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPG 663
+N GA PPD+SL+ R G DYI++LL GY+ PPAG+ + GQ+YNPY G
Sbjct: 137 ANGGALPPDMSLLAKARANGPDYIYSLLVGYVNPPAGLKIGPGQHYNPYMAG 188
Score = 66.1 bits (154), Expect = 8e-10
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 11/92 (11%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNL---------VNVTHTEDE--AKAEAAEVMI 409
D ++RGY+VY++VC +CHS++ ++FRNL ++ D KA A E +
Sbjct: 44 DQVQLQRGYKVYREVCASCHSMKLVSFRNLGDKGGPFYNEKYKNSNDNPWVKAIAKEYEV 103
Query: 410 KDGPDEEGNYFERPGKLSDYLPSPYPNENAAR 505
D E G+ +RP +D+ P+P+PNE AAR
Sbjct: 104 ADIDSETGDPIKRPATSADHFPAPFPNEIAAR 135
>UniRef50_Q0F3L9 Cluster: Cytochrome c1, heme protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Cytochrome c1, heme
protein - Mariprofundus ferrooxydans PV-1
Length = 231
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = +1
Query: 517 GAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAISMAQVL 690
G PPDLSLI S R+GG DY++++LTG+ PAG V +G N+N YFPG I+M L
Sbjct: 110 GKVPPDLSLIVSARRGGADYVYSILTGFEHDPAGHV-PDG-NFNEYFPGNRIAMPDPL 165
Score = 42.3 bits (95), Expect = 0.011
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHT 370
D A +RRG V+ ++C CHS +Y+ +R+L++ T
Sbjct: 41 DQAQIRRGLTVFTELCMGCHSAKYVTYRDLIDYPET 76
>UniRef50_Q0C5B1 Cluster: Putative ubiquinol-cytochrome c reductase,
cytochrome c1; n=1; Hyphomonas neptunium ATCC 15444|Rep:
Putative ubiquinol-cytochrome c reductase, cytochrome c1
- Hyphomonas neptunium (strain ATCC 15444)
Length = 319
Score = 63.7 bits (148), Expect = 4e-09
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 12/94 (12%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLVN---------VTHTEDE--AKAEAAEVMI 409
D ASV+RGY+VYKQVC +CH ++ +++RNL + D KA AAE +
Sbjct: 46 DKASVQRGYQVYKQVCSSCHGMKLMSYRNLGEPGGPFYDPAYPNPNDNPFVKALAAENEV 105
Query: 410 KDG-PDEEGNYFERPGKLSDYLPSPYPNENAARA 508
+ P++ G Y RP +D +P+PN+ AARA
Sbjct: 106 MNATPNDTGEYDYRPAMPADRFRAPFPNDAAARA 139
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +1
Query: 484 PQ*KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEP 609
P +N GA PPDLS++ R G DYIF L+TGY +P
Sbjct: 132 PNDAAARAANGGALPPDLSVMVKARHYGADYIFDLMTGYPDP 173
>UniRef50_P81379 Cluster: Cytochrome c1 precursor; n=1;
Blastochloris viridis|Rep: Cytochrome c1 precursor -
Rhodopseudomonas viridis
Length = 282
Score = 60.5 bits (140), Expect = 4e-08
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTE---DEAKAEAAE--VMIKDGPDE 427
D A +RRG++V++ VC +CH+L+ FRNL + DE + AA V +KD ++
Sbjct: 47 DKAQLRRGFQVFQNVCVSCHTLENGGFRNLPSRAAPNWPLDEVRQLAASWPVQVKD-IND 105
Query: 428 EGNYFERPGKLSDYLPSPYPNENAAR 505
+G+ +R KL D +PS Y NE AAR
Sbjct: 106 KGDPMQRAPKLPDRIPSQYANEAAAR 131
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 18/85 (21%)
Frame = +1
Query: 511 NNGAYPPDLSLICSGR------------------KGGEDYIFALLTGYMEPPAGVVLREG 636
+NGA PPDLS+I R + G DYI ALL GY +PP + +G
Sbjct: 134 HNGAVPPDLSVIAKARTFQRGFPWWVTDIFTQYNENGVDYIVALLNGYEDPPERFKVPDG 193
Query: 637 QNYNPYFPGGAISMAQVLFDEAAEY 711
YN YFPG I M + D Y
Sbjct: 194 SFYNKYFPGHIIGMTPPIADGLVTY 218
>UniRef50_A5G2Q4 Cluster: Cytochrome c1 precursor; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome c1 precursor - Acidiphilium
cryptum (strain JF-5)
Length = 243
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/71 (42%), Positives = 38/71 (53%)
Frame = +1
Query: 478 SIPQ*KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYF 657
S P K +N+GA PPDLSL +G G Y+ +LL GY + P + L YN F
Sbjct: 109 SYPDAKAAIAANHGALPPDLSLFEAGHPRGAAYVQSLLLGYRKAPPNLTLLPNHYYNVAF 168
Query: 658 PGGAISMAQVL 690
PGG I+M L
Sbjct: 169 PGGQIAMPPAL 179
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +2
Query: 269 ASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYFER 448
A+++ G+ VY+ C +CH L + +R+L + +E + A A++ DG D G
Sbjct: 39 AALQTGFAVYRADCASCHGLSLVHYRDLGGIGLSEKDIAAITAQISQPDGTDAHGKPHMV 98
Query: 449 PGKLSDYLPSPYPNENAARA 508
D + YP+ AA A
Sbjct: 99 KATPDDAITWSYPDAKAAIA 118
>UniRef50_UPI00015C5732 Cluster: hypothetical protein CKO_01261;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01261 - Citrobacter koseri ATCC BAA-895
Length = 272
Score = 57.2 bits (132), Expect = 4e-07
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Frame = +2
Query: 185 AVCAGIGL*SSPTSQPLESQWLVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVT 364
AVCA +P Q + D +RRG +VY++ C+ACH + ++ FR L
Sbjct: 19 AVCAQ----ETPPRQAWSFSGITGHYDKEQLRRGLQVYEEKCRACHGMVHLNFRTLTKPG 74
Query: 365 HTE---DEAKAEAAEVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAAR 505
E EAK A+ + D D +G ER G L+D SPY N+ AR
Sbjct: 75 GPELSLTEAKRLASGYVFPDIQD-DGQPGEREGNLNDTFVSPYLNDQEAR 123
Score = 33.1 bits (72), Expect = 7.0
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 565 GEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAISMAQVLFD 696
G DY++ALLTGY+ P ++ N Y PGG I+M + L D
Sbjct: 162 GADYVYALLTGYL--PDDPEMKA----NRYAPGGIINMPKPLSD 199
>UniRef50_Q5FTF1 Cluster: Ubiquinol-cytochrome-c reductase; n=1;
Gluconobacter oxydans|Rep: Ubiquinol-cytochrome-c
reductase - Gluconobacter oxydans (Gluconobacter
suboxydans)
Length = 230
Score = 56.8 bits (131), Expect = 5e-07
Identities = 24/76 (31%), Positives = 45/76 (59%)
Frame = +2
Query: 278 RRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYFERPGK 457
+RG V++QVC ACH ++++ + ++ + + + + AA+ + +G D+ G+ RP
Sbjct: 26 QRGLMVFQQVCSACHGMEHVTYGDMSRLGLSPVQIRKWAADRQMPNGTDDNGDPKTRPAT 85
Query: 458 LSDYLPSPYPNENAAR 505
+D + SPYPNE R
Sbjct: 86 ATDPILSPYPNEAMGR 101
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/76 (35%), Positives = 33/76 (43%)
Frame = +1
Query: 484 PQ*KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPG 663
P G +N+G PPDLS + G + I +L Y PAGV L EG+ YN
Sbjct: 95 PNEAMGRLANHGLLPPDLSRLALTLPRGAEEIRQILLSYAPTPAGVTLDEGRYYNTALKW 154
Query: 664 GAISMAQVLFDEAAEY 711
I M L D Y
Sbjct: 155 KHIGMPPPLQDGMLTY 170
>UniRef50_Q5NNX8 Cluster: Cytochrome c1; n=1; Zymomonas mobilis|Rep:
Cytochrome c1 - Zymomonas mobilis
Length = 279
Score = 53.6 bits (123), Expect = 5e-06
Identities = 30/64 (46%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Frame = +1
Query: 529 PDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLR-------EGQNYNPYFPGGAISMAQV 687
PDLSLI RKGG Y+++LLTGY P + R EG YNPYF G I+M
Sbjct: 152 PDLSLITKARKGGAAYVYSLLTGYESEPKEISERYPQLKTPEGTFYNPYFKGLHIAMPLA 211
Query: 688 LFDE 699
L E
Sbjct: 212 LLSE 215
Score = 43.2 bits (97), Expect = 0.007
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 224 SQPLESQWLVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEV 403
S L S L D +RRG+ V++ VC +CH + F++L + +++ E + E
Sbjct: 51 SLKLPSDGLTGHFDKKQLRRGFTVFQAVCASCHGTNQLRFQDLAEIGYSKAEIDSIRQEW 110
Query: 404 M--IKDGPDEEGNYFERPGKLSDYLPSPYPN 490
+ I D G R +D + PY N
Sbjct: 111 INRIPDIDPNTGEAMMRQPNRNDRITGPYYN 141
>UniRef50_A0DBS8 Cluster: Chromosome undetermined scaffold_442,
whole genome shotgun sequence; n=6;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_442, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 317
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 508 SNNGAYPPDLSLICSGRKGGEDYIFALLTGY-MEPPAGVVLREGQNYNPYFPGGAISMAQ 684
+N G +P D S I R GG +YI+ +LTGY +P G+ + +G+ YNPYF I M +
Sbjct: 151 ANGGVWPTDFSKIRL-RPGGVNYIYNILTGYHYKPYQGLDVPKGKAYNPYFDHMIIGMVR 209
Query: 685 VLFDEAAEY 711
L D +Y
Sbjct: 210 QLHDGLVDY 218
Score = 35.1 bits (77), Expect = 1.7
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +2
Query: 257 SLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGN 436
+ D ASVRRG+ V+ + C CH + Y + L++ + + E A + I
Sbjct: 62 TFDSASVRRGFLVFSRNCANCHGIVYKKYDVLLDKVYKQLELAALVSNFTIHPAHHHFKQ 121
Query: 437 YF-----ERPGKLSDYLPSPYPNENAAR 505
++ ER + D + PY +++ A+
Sbjct: 122 FYYQEWDERDRYIHDRIYPPYFSQDQAK 149
>UniRef50_P13627 Cluster: Cytochrome c1 precursor; n=8;
Bacteria|Rep: Cytochrome c1 precursor - Paracoccus
denitrificans
Length = 450
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLVN---VTHTEDEAKAEAAEVMIKDGPDEEG 433
D ++RG +VY +VC ACH L+Y+ R L + ED+ +A AA I D EE
Sbjct: 230 DQHQLQRGLQVYTEVCSACHGLRYVPLRTLADEGGPQLPEDQVRAYAANFDITDPETEE- 288
Query: 434 NYFERPGKLSDYLPS 478
+RP +D+ P+
Sbjct: 289 ---DRPRVPTDHFPT 300
Score = 35.1 bits (77), Expect = 1.7
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 514 NGAYPPDLSLICSGRKGGEDYIFALLTGY---MEPPAGVVLREGQNYNPYFPGGAISMAQ 684
+G Y LS + +G GG +YI A+LTGY + AG VL +N F G I MA
Sbjct: 321 HGPYGTGLSQLFNGI-GGPEYIHAVLTGYDGEEKEEAGAVL----YHNAAFAGNWIQMAA 375
Query: 685 VLFDEAAEY 711
L D+ Y
Sbjct: 376 PLSDDQVTY 384
>UniRef50_Q02760 Cluster: Cytochrome c1 precursor; n=13;
Rhodobacteraceae|Rep: Cytochrome c1 precursor -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 285
Score = 46.8 bits (106), Expect = 5e-04
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +2
Query: 257 SLDHASVRRGYEVYKQVCKACHSLQYIAFRNLV---NVTHTEDEAKAEAAEVMIKDGPDE 427
+ D ++RG +VY +VC ACH ++++ R+L ED+ +A A + + D +E
Sbjct: 41 TFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTD--EE 98
Query: 428 EGNYFERPGKLSDYLPSPYPNENAARAQTM 517
G +R GK +D+ P ENAA M
Sbjct: 99 TGE--DREGKPTDHFPHS-ALENAADLSLM 125
>UniRef50_A0L4I9 Cluster: Cytochrome c1 precursor; n=1;
Magnetococcus sp. MC-1|Rep: Cytochrome c1 precursor -
Magnetococcus sp. (strain MC-1)
Length = 277
Score = 42.7 bits (96), Expect = 0.009
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +1
Query: 517 GAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAISMAQVL 690
G PPDLSL+ RKG E+Y++ +LTGY+ + E A +A+VL
Sbjct: 115 GTVPPDLSLMTKARKGYENYLYGILTGYLTDDEAAKVSEASEDGNVTDEEAKHLAEVL 172
Score = 41.5 bits (93), Expect = 0.020
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDE 379
D A ++RG +V +VC CHS++Y+ F L TEDE
Sbjct: 47 DKAQIKRGIQVATEVCMGCHSIKYLKFDQLRQFGITEDE 85
>UniRef50_Q2HYN0 Cluster: Cytochrome c-1 isoform; n=1; Ictalurus
punctatus|Rep: Cytochrome c-1 isoform - Ictalurus
punctatus (Channel catfish)
Length = 98
Score = 39.9 bits (89), Expect = 0.061
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 108 TKNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSG 248
+K RK +S+L L L QSV+AS E H P PW+H G
Sbjct: 36 SKGRKAAISSLGVLTAGGAGLALILHQSVKASDLELHAPSYPWSHGG 82
>UniRef50_Q1GCS2 Cluster: Cytochrome c1; n=10;
Alphaproteobacteria|Rep: Cytochrome c1 - Silicibacter
sp. (strain TM1040)
Length = 263
Score = 39.1 bits (87), Expect = 0.11
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVT---HTEDEAKAEAAEVMIKDGPDEEG 433
D ++RG ++Y +VC ACH L+ + R L + ED+ +A AA+ + D E
Sbjct: 44 DQNQLQRGLQIYTEVCAACHGLKQVPIRTLSDSDGPGMPEDQVRAYAADNF--EVFDPEL 101
Query: 434 NYFERPGKLSDYLP 475
+ F RP K D+ P
Sbjct: 102 DDF-RPAKPVDHFP 114
Score = 37.5 bits (83), Expect = 0.32
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 514 NGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNY--NPYFPGGAISMAQV 687
+G Y ++ + G GG +YI +L+TGY + G + N FPGG ISMA
Sbjct: 135 HGPYGLGINQLFKGM-GGAEYIASLMTGYT---GETKVEAGTTFYKNTAFPGGWISMAPP 190
Query: 688 LFDEAAEY 711
L DE E+
Sbjct: 191 LADEQVEF 198
>UniRef50_Q31GY5 Cluster: Ubiquinol:cytochrome c oxidoreductase (Bc1
complex) cytochrome c1 subunit precursor; n=1;
Thiomicrospira crunogena XCL-2|Rep: Ubiquinol:cytochrome
c oxidoreductase (Bc1 complex) cytochrome c1 subunit
precursor - Thiomicrospira crunogena (strain XCL-2)
Length = 219
Score = 35.9 bits (79), Expect = 0.99
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDE 379
D S++RG ++ + C ACHSL+Y+ + + EDE
Sbjct: 37 DKDSLKRGAILFSEYCMACHSLKYMRYNRIARDLGWEDE 75
>UniRef50_O67706 Cluster: Uncharacterized protein aq_1854 precursor;
n=1; Aquifex aeolicus|Rep: Uncharacterized protein
aq_1854 precursor - Aquifex aeolicus
Length = 152
Score = 35.9 bits (79), Expect = 0.99
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 251 VRSLDHASVRRGYEVYKQVCKACH 322
V ++DH +++GYEVYK+ C ACH
Sbjct: 14 VFAVDHNLLQKGYEVYKKHCSACH 37
>UniRef50_UPI0000DAE79F Cluster: hypothetical protein
Rgryl_01001216; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01001216 - Rickettsiella
grylli
Length = 256
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 224 SQPLESQWLVRSLDHASVRRGYEVYKQVCKACHSLQYIAFRNL 352
++PL+S ++ D AS++RG + + C CHSLQ++ + L
Sbjct: 25 TKPLKSG--IQQSDLASIQRGAKYFMNYCSGCHSLQHMRYNRL 65
>UniRef50_A1ZIW5 Cluster: Methylamine utilization protein MauG; n=1;
Microscilla marina ATCC 23134|Rep: Methylamine
utilization protein MauG - Microscilla marina ATCC 23134
Length = 314
Score = 35.5 bits (78), Expect = 1.3
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +2
Query: 242 QWLVRSLDHASV-RRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDG 418
Q++ + L + + ++G V+KQ C CH + F +L D + I +
Sbjct: 167 QYVQKKLPLSDIEQQGLTVFKQKCSTCHQISNQLFTDLSYRNIGLDSVLLDVGRYNITER 226
Query: 419 PDEEGNYFERPGKLSDYLPSPYPNENAARAQTMVLTHRT 535
+++G F+ P + L PY ++ VLTH T
Sbjct: 227 KEDKGK-FKVPSLRNVLLTPPYMHDGRFSTIDEVLTHYT 264
>UniRef50_O31216 Cluster: Cytochrome c1 precursor; n=16;
Gammaproteobacteria|Rep: Cytochrome c1 precursor -
Chromatium vinosum (Allochromatium vinosum)
Length = 244
Score = 35.5 bits (78), Expect = 1.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNL 352
D AS++RG + + C CHSLQY+ + L
Sbjct: 35 DQASLQRGAKYFMNYCTGCHSLQYMRYNRL 64
>UniRef50_Q2UN86 Cluster: Predicted protein; n=6;
Trichocomaceae|Rep: Predicted protein - Aspergillus
oryzae
Length = 410
Score = 35.1 bits (77), Expect = 1.7
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 272 SVRRGYEVYKQVCKAC-HSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYFER 448
S ++ E Y ++ K H ++ I R + +V H ED+ E + + PD+ FE+
Sbjct: 327 STQKDPEAYAEIYKRHPHWIRAIWIRKVTDVPHLEDQNSPERFKAAFQGVPDQIWKVFEQ 386
Query: 449 PGKLSDYL 472
P + D+L
Sbjct: 387 PEAVFDFL 394
>UniRef50_Q7NQX9 Cluster: Ubiquinol-cytochrome c reductase; n=15;
Proteobacteria|Rep: Ubiquinol-cytochrome c reductase -
Chromobacterium violaceum
Length = 254
Score = 34.7 bits (76), Expect = 2.3
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 517 GAYPPDLSLICSGRKGGEDYIFALLTGYMEPPA 615
GA PPDLSLI R G DY+++ L G+ P+
Sbjct: 108 GATPPDLSLIARSR--GADYLYSYLRGFYRDPS 138
Score = 34.3 bits (75), Expect = 3.0
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAE 391
D S++RG +++ C +CHS + + L ++ +E++ KA+
Sbjct: 40 DTESLQRGAQIFANYCLSCHSASMMRYNRLEDIGLSEEQIKAD 82
>UniRef50_Q9PPY9 Cluster: DNA helicase II; n=1; Ureaplasma
parvum|Rep: DNA helicase II - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 743
Score = 34.3 bits (75), Expect = 3.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 260 LDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTH 367
+D +R ++YK C C L Y+ F +L+N+TH
Sbjct: 169 VDLNDAQRLVDIYKIYCDRCFKLNYVDFDDLINLTH 204
>UniRef50_Q676U5 Cluster: Autophagy-related protein 16-1; n=64;
Coelomata|Rep: Autophagy-related protein 16-1 - Homo
sapiens (Human)
Length = 607
Score = 33.9 bits (74), Expect = 4.0
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 478 SIPQ*KCGSCSNNGAYPPDLSLICSGRKGGEDYIFALLTGYME 606
S P KCGS + PD S + +G G YI+++LTG +E
Sbjct: 527 SAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVE 569
>UniRef50_A4AN07 Cluster: Cytochrome c, class I; n=5;
Flavobacteriales|Rep: Cytochrome c, class I -
Flavobacteriales bacterium HTCC2170
Length = 167
Score = 33.5 bits (73), Expect = 5.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 230 PLESQWLVRSLDHASVRRGYEVYKQVCKACHSL 328
P+ S L ++D A +G EVY Q+C ACH +
Sbjct: 65 PVTSLTLEDAIDDAMAAKGKEVYDQMCLACHRI 97
>UniRef50_Q755B8 Cluster: AFL095Wp; n=2; Eremothecium gossypii|Rep:
AFL095Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 2535
Score = 33.5 bits (73), Expect = 5.3
Identities = 25/82 (30%), Positives = 32/82 (39%)
Frame = +3
Query: 54 YGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNP 233
Y +V P+A ++T T GWT K LST + E EAH
Sbjct: 1326 YYVVTPEAHAVTTTTSGWTGTYKTTLSTDVTTVTGTNGIA-TTETIYHVVTPEAHAITE- 1383
Query: 234 WNHSGWFAPWTTLVSVGVMKFT 299
SGW +TT +S V T
Sbjct: 1384 -TTSGWMGTYTTTLSTDVTTIT 1404
>UniRef50_Q2UST1 Cluster: ATP-dependent RNA helicase mss116,
mitochondrial precursor; n=4; Trichocomaceae|Rep:
ATP-dependent RNA helicase mss116, mitochondrial
precursor - Aspergillus oryzae
Length = 633
Score = 33.5 bits (73), Expect = 5.3
Identities = 23/78 (29%), Positives = 33/78 (42%)
Frame = +2
Query: 290 EVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYFERPGKLSDY 469
E+ +Q+ K+C L R L A+A A +K P PG+L DY
Sbjct: 177 ELAQQIAKSCDQLTSQLARPLECHIAVGGTARASALARFMKGAPSI---LVATPGRLKDY 233
Query: 470 LPSPYPNENAARAQTMVL 523
L P E + QT++L
Sbjct: 234 LSEPSTAEKLSNIQTLIL 251
>UniRef50_Q7UV57 Cluster: Probable fimbrial assembly protein PilM;
n=1; Pirellula sp.|Rep: Probable fimbrial assembly
protein PilM - Rhodopirellula baltica
Length = 719
Score = 33.1 bits (72), Expect = 7.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 32 WGTSFEKIWSSLASGLSAVHQHSRMDKKQKSVAV 133
W T+ EK+WS A +S++ HS K + S+ V
Sbjct: 406 WQTTHEKLWSGAAQAVSSMSSHSSDQKSEDSLLV 439
>UniRef50_Q3JEC0 Cluster: Cytochrome c1 precursor; n=1;
Nitrosococcus oceani ATCC 19707|Rep: Cytochrome c1
precursor - Nitrosococcus oceani (strain ATCC 19707 /
NCIMB 11848)
Length = 240
Score = 33.1 bits (72), Expect = 7.0
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLV-NVTHTEDE 379
D AS++RG +V+ C +CHS +Y+ + + ++ TE E
Sbjct: 36 DKASLQRGAQVFMNYCLSCHSAKYMRYSRMAQDLGLTEQE 75
>UniRef50_Q0UHX0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 605
Score = 33.1 bits (72), Expect = 7.0
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -1
Query: 252 TSHCDSKGCEVGELQSPMPAQTAQVQKVELQHLHLPLPKWTATLF---CFLSILECWWTA 82
T+H D G ++S A + V+ + +H H+ P W+ F CFL++L +
Sbjct: 475 TNHQDVNGFARTGVRSSTTAASKYVKSLREEHFHMFWPHWSQVAFSCICFLNLLMAITSP 534
Query: 81 DKPEA 67
D EA
Sbjct: 535 DMQEA 539
>UniRef50_Q606Q5 Cluster: Ubiquinol--cytochrome c reductase,
cytochrome c1; n=1; Methylococcus capsulatus|Rep:
Ubiquinol--cytochrome c reductase, cytochrome c1 -
Methylococcus capsulatus
Length = 240
Score = 32.7 bits (71), Expect = 9.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 263 DHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTED 376
D S+RRG Y C+ CHSL+++ + + + E+
Sbjct: 34 DKESLRRGAVTYANYCQGCHSLKHLRYSRMAHDLKLEE 71
>UniRef50_A4BV27 Cluster: Cytochrome c5; n=2; Nitrococcus mobilis
Nb-231|Rep: Cytochrome c5 - Nitrococcus mobilis Nb-231
Length = 163
Score = 32.7 bits (71), Expect = 9.2
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +2
Query: 269 ASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYFER 448
+ R G +V KQVC ACH+ Q++ + N AK E + + GN +
Sbjct: 79 SDARSGEQVVKQVCSACHTAQFMNAPQIGNKAEWAPRAK-EGLDTLTTHVLQGFGNMPPQ 137
Query: 449 PGKLSD 466
G +S+
Sbjct: 138 SGSVSE 143
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,413,339
Number of Sequences: 1657284
Number of extensions: 17329913
Number of successful extensions: 56365
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 52777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56230
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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