Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20557
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   1.8  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            25   3.1  
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       23   9.5  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    23   9.5  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    23   9.5  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 18/65 (27%), Positives = 28/65 (43%)
 Frame = +2

Query: 497 AARAQTMVLTHRTCL*SARDVRAAKITSSRY*LVTWNLLLV*CYVRDRTTIHTSQEVPSL 676
           AA     VL H+ C+  ARD+ A    ++      W + +   YV  +  I   Q   + 
Sbjct: 648 AANGIGAVLAHKGCIIEARDIFAQVREATADFCDVW-INIAHIYVEQKQYISAIQMYENC 706

Query: 677 WRKFY 691
            +KFY
Sbjct: 707 LKKFY 711


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = +1

Query: 115 TEKCGCPLWEW*VEVLELYFLHLSSL-CRHRALKLTHLTTLGITVAGSLPG 264
           T +C    WEW    L++   HL  L   +  +   H +T    +A  +PG
Sbjct: 519 TPECNYTFWEWLYAALKIIRDHLQVLWVNNTIIGFIHKSTAEKYLAKCVPG 569


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 461 SDYLPSPYPNENAARAQTMVLTHRTC 538
           S Y+   + N N  + Q  + TH TC
Sbjct: 299 SSYIRMKFENLNRRKDQKEIYTHLTC 324


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 204 GSEAHPPHNPWNHSGWFAPW 263
           G + H   NPW H    AP+
Sbjct: 302 GFDKHNLENPWRHGTRMAPF 321


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 204 GSEAHPPHNPWNHSGWFAPW 263
           G + H   NPW H    AP+
Sbjct: 302 GFDKHNLENPWRHGTRMAPF 321


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,082
Number of Sequences: 2352
Number of extensions: 18976
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)