Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20556
(693 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 271 3e-73
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 266 9e-72
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 262 1e-70
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 176 1e-44
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 151 4e-37
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 124 7e-29
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 116 1e-26
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 115 4e-26
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 7e-26
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 113 1e-25
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 2e-25
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 2e-25
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 112 2e-25
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 97 9e-21
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 85 4e-17
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 6e-15
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 77 1e-14
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 70 2e-12
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 64 8e-11
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 63 2e-10
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 62 5e-10
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 54 1e-07
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 3e-07
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 42 6e-04
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.7
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 4.7
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 28 6.2
SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 28 8.3
SB_39714| Best HMM Match : Lipin_N (HMM E-Value=0) 28 8.3
SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 271 bits (665), Expect = 3e-73
Identities = 123/137 (89%), Positives = 128/137 (93%)
Frame = +3
Query: 51 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 230
L+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 211 LFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 270
Query: 231 QVRAPRHPVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 410
+ VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL
Sbjct: 271 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 330
Query: 411 DVVRKESESCDCLQGFQ 461
DVVRKE+ESCDCLQGFQ
Sbjct: 331 DVVRKEAESCDCLQGFQ 347
Score = 131 bits (317), Expect = 5e-31
Identities = 61/64 (95%), Positives = 62/64 (96%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 679
G LISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL
Sbjct: 361 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 420
Query: 680 YDIC 691
YDIC
Sbjct: 421 YDIC 424
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 266 bits (653), Expect = 9e-72
Identities = 121/134 (90%), Positives = 125/134 (93%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 239
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 240 APRHPVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 419
VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 420 RKESESCDCLQGFQ 461
RKE+ESCDCLQGFQ
Sbjct: 121 RKEAESCDCLQGFQ 134
Score = 131 bits (317), Expect = 5e-31
Identities = 61/64 (95%), Positives = 62/64 (96%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 679
G LISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL
Sbjct: 148 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 207
Query: 680 YDIC 691
YDIC
Sbjct: 208 YDIC 211
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 262 bits (643), Expect = 1e-70
Identities = 118/134 (88%), Positives = 125/134 (93%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 239
MREIV LQAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 240 APRHPVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 419
+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 420 RKESESCDCLQGFQ 461
RKE+ESCDC+QGFQ
Sbjct: 121 RKEAESCDCIQGFQ 134
Score = 131 bits (316), Expect = 6e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 679
G LISKIREEYPDRIMNT+S+VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL
Sbjct: 148 GTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 207
Query: 680 YDIC 691
YDIC
Sbjct: 208 YDIC 211
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 176 bits (429), Expect = 1e-44
Identities = 80/92 (86%), Positives = 83/92 (90%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 239
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 240 APRHPVDLEPGTMDSVRSGPFGQIFRPDNFVF 335
VDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 151 bits (367), Expect = 4e-37
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+E
Sbjct: 11 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 70
Query: 435 SCDCLQGFQ 461
SCDC+QGFQ
Sbjct: 71 SCDCIQGFQ 79
Score = 128 bits (310), Expect = 3e-30
Identities = 59/61 (96%), Positives = 60/61 (98%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
LI KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI
Sbjct: 96 LILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 155
Query: 689 C 691
C
Sbjct: 156 C 156
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 124 bits (299), Expect = 7e-29
Identities = 51/69 (73%), Positives = 61/69 (88%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKE+E
Sbjct: 22 VDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEAE 81
Query: 435 SCDCLQGFQ 461
+CDC+QG Q
Sbjct: 82 NCDCMQGVQ 90
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKV 583
G ++SKIREEYPDRI++ +SVVPSPKV
Sbjct: 104 GTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 116 bits (280), Expect = 1e-26
Identities = 59/136 (43%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 233
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 234 VRAPRHP-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 410
PR VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VL
Sbjct: 61 -HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVL 119
Query: 411 DVVRKESESCDCLQGF 458
D +RK ++ C LQGF
Sbjct: 120 DRIRKLADQCTGLQGF 135
Score = 116 bits (280), Expect = 1e-26
Identities = 58/138 (42%), Positives = 81/138 (58%), Gaps = 3/138 (2%)
Frame = +3
Query: 54 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 227
Y+ RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 228 GQVRAPRHP-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 404
G+ PR VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 492 GK-HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDL 550
Query: 405 VLDVVRKESESCDCLQGF 458
VLD +RK ++ C LQGF
Sbjct: 551 VLDRIRKLADQCTGLQGF 568
Score = 62.1 bits (144), Expect = 4e-10
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 153 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 212
Query: 689 C 691
C
Sbjct: 213 C 213
Score = 62.1 bits (144), Expect = 4e-10
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 586 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 645
Query: 689 C 691
C
Sbjct: 646 C 646
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 115 bits (276), Expect = 4e-26
Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 233
+RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 234 VRAPRHP-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 410
PR VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VL
Sbjct: 646 -HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVL 704
Query: 411 DVVRKESESCDCLQGF 458
D +RK ++ C LQGF
Sbjct: 705 DRIRKLADQCTGLQGF 720
Score = 113 bits (273), Expect = 1e-25
Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Frame = +3
Query: 51 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEAS 224
L RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 62 LILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 121
Query: 225 GGQVRAPRHP-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 401
G+ PR VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 122 AGK-HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVD 180
Query: 402 SVLDVVRKESESCDCLQGF 458
VLD +RK ++ C LQGF
Sbjct: 181 LVLDRIRKLADQCTGLQGF 199
Score = 62.1 bits (144), Expect = 4e-10
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 738 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 797
Query: 689 C 691
C
Sbjct: 798 C 798
Score = 61.7 bits (143), Expect = 5e-10
Identities = 23/61 (37%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 217 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 276
Query: 689 C 691
C
Sbjct: 277 C 277
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 63 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQV 236
RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK- 572
Query: 237 RAPRHP-VDLEPGTMDSV 287
PR VDLEP + +
Sbjct: 573 HVPRAVFVDLEPTVRECI 590
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 114 bits (274), Expect = 7e-26
Identities = 55/138 (39%), Positives = 81/138 (58%), Gaps = 3/138 (2%)
Frame = +3
Query: 54 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 227
Y+ RE V + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 228 GQVRAPRHP-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 404
G+ PR VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+
Sbjct: 477 GK-HVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDN 535
Query: 405 VLDVVRKESESCDCLQGF 458
VLD +RK ++ C LQGF
Sbjct: 536 VLDRIRKLADQCSGLQGF 553
Score = 95.1 bits (226), Expect = 5e-20
Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Frame = +3
Query: 105 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQVRAPRHPV-DLEPGT 275
+G WE+ EHGI P G D + + N +++E G+ PR DLEP
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK-HVPRAVFCDLEPTV 59
Query: 276 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQG 455
+D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK ++ C LQG
Sbjct: 60 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQG 119
Query: 456 F 458
F
Sbjct: 120 F 120
Score = 62.5 bits (145), Expect = 3e-10
Identities = 23/61 (37%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 571 LLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDI 630
Query: 689 C 691
C
Sbjct: 631 C 631
Score = 61.7 bits (143), Expect = 5e-10
Identities = 23/61 (37%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 138 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 197
Query: 689 C 691
C
Sbjct: 198 C 198
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 113 bits (273), Expect = 1e-25
Identities = 56/135 (41%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
Frame = +3
Query: 63 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 236
RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK- 59
Query: 237 RAPRHP-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 413
PR VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD 119
Query: 414 VVRKESESCDCLQGF 458
+RK ++ C LQGF
Sbjct: 120 RIRKLADQCTGLQGF 134
Score = 62.1 bits (144), Expect = 4e-10
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 152 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 211
Query: 689 C 691
C
Sbjct: 212 C 212
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 113 bits (271), Expect = 2e-25
Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Frame = +3
Query: 54 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 227
Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 228 GQVRAPRHP-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 404
G+ PR DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 863 GK-HVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDL 921
Query: 405 VLDVVRKESESCDCLQGF 458
VLD +RK ++ C LQGF
Sbjct: 922 VLDRIRKLADQCTGLQGF 939
Score = 110 bits (264), Expect = 1e-24
Identities = 56/135 (41%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Frame = +3
Query: 63 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 236
RE + + GQ G QIG WE+ EHGI P G D + + N ++ E G+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGK- 431
Query: 237 RAPRHP-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 413
PR VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 432 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLD 491
Query: 414 VVRKESESCDCLQGF 458
+RK ++ C LQGF
Sbjct: 492 RLRKLADGCTGLQGF 506
Score = 61.7 bits (143), Expect = 5e-10
Identities = 23/61 (37%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 957 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 1016
Query: 689 C 691
C
Sbjct: 1017 C 1017
Score = 61.3 bits (142), Expect = 7e-10
Identities = 23/61 (37%), Positives = 41/61 (67%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P +S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 524 LMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 583
Query: 689 C 691
C
Sbjct: 584 C 584
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 112 bits (270), Expect = 2e-25
Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 233
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 234 VRAPRHPV-DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 410
PR DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VL
Sbjct: 61 -HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVL 119
Query: 411 DVVRKESESCDCLQGF 458
D +RK ++ C LQGF
Sbjct: 120 DRLRKLADGCTGLQGF 135
Score = 62.1 bits (144), Expect = 4e-10
Identities = 23/61 (37%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 153 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDI 212
Query: 689 C 691
C
Sbjct: 213 C 213
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 112 bits (270), Expect = 2e-25
Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 233
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 234 VRAPRHP-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 410
PR VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 61 -HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVL 119
Query: 411 DVVRKESESCDCLQGF 458
D RK ++ C LQGF
Sbjct: 120 DRCRKLADQCTGLQGF 135
Score = 61.7 bits (143), Expect = 5e-10
Identities = 23/61 (37%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 153 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 212
Query: 689 C 691
C
Sbjct: 213 C 213
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 97.5 bits (232), Expect = 9e-21
Identities = 43/64 (67%), Positives = 53/64 (82%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 679
G L+SKIREEYPDR+++++ V+PSP VS+TV EPYNATLS HQLV+ D CIDNEAL
Sbjct: 56 GSLLLSKIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDVADAAICIDNEAL 115
Query: 680 YDIC 691
Y+IC
Sbjct: 116 YNIC 119
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = +3
Query: 339 QSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 461
Q+ A NNWAKG YTEGAEL+DS +D +RK +E+CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQ 42
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 85.4 bits (202), Expect = 4e-17
Identities = 51/136 (37%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 233
MRE + + GQ G QIG WE+ EHGI P G D + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 234 VRAPRHP-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 410
PR VDLEP + P+ + G+ A NN+A+GHYT G + VD VL
Sbjct: 61 -HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVL 109
Query: 411 DVVRKESESCDCLQGF 458
D +RK ++ C LQGF
Sbjct: 110 DRLRKLADQCSGLQGF 125
Score = 60.5 bits (140), Expect = 1e-09
Identities = 23/61 (37%), Positives = 41/61 (67%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + ++V P+P ++ VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 143 LMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 202
Query: 689 C 691
C
Sbjct: 203 C 203
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +3
Query: 192 ERINVYYNEASGGQVRAPRHP-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 368
+ N ++ E G+ PR VDLEP +D +R+G + Q+F P+ + G+ A NN+A+
Sbjct: 12 DSFNTFFAETGAGK-HVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYAR 70
Query: 369 GHYTEGAELVDSVLDVVRKESESCDCLQGF 458
GHYT G E +D LD +RK ++ C LQGF
Sbjct: 71 GHYTVGKEHIDLALDRIRKLADQCTGLQGF 100
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + ++V P+P++S VVEPYN+ LS H +E++D + +DNEA+YDI
Sbjct: 118 LMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTLEHSDCAFMVDNEAIYDI 177
Query: 689 C 691
C
Sbjct: 178 C 178
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 78.2 bits (184), Expect = 6e-15
Identities = 34/82 (41%), Positives = 53/82 (64%)
Frame = +3
Query: 213 NEASGGQVRAPRHPVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 392
+EA+ G+ VDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 393 LVDSVLDVVRKESESCDCLQGF 458
+V+ V+D +RK ++ C LQGF
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGF 1046
Score = 60.5 bits (140), Expect = 1e-09
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +2
Query: 530 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 691
+Y + ++V P+P +S VVEPYN+ L+ H +E++D T+ +DNEA+YD+C
Sbjct: 1071 DYGKKSKLEFAVYPAPHISTAVVEPYNSVLTTHTTLEHSDCTFMVDNEAIYDLC 1124
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 77.0 bits (181), Expect = 1e-14
Identities = 43/88 (48%), Positives = 54/88 (61%), Gaps = 24/88 (27%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAT--------------------- 616
G ++ ++EEYPDRI+++ SV PSP+VS+ VVEPYNA
Sbjct: 29 GTLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQLLETTDEVSEIVVEPY 88
Query: 617 ---LSVHQLVENTDETYCIDNEALYDIC 691
LSVHQL+E TDE +CIDNEALYDIC
Sbjct: 89 NAALSVHQLLETTDEVFCIDNEALYDIC 116
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 417 VRKESESCDCLQGFQ 461
+RKE+E CD +QGFQ
Sbjct: 1 MRKEAEDCDAIQGFQ 15
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +3
Query: 279 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 458
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Score = 61.7 bits (143), Expect = 5e-10
Identities = 23/61 (37%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 90 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 149
Query: 689 C 691
C
Sbjct: 150 C 150
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = +3
Query: 285 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 458
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
Score = 61.7 bits (143), Expect = 5e-10
Identities = 23/61 (37%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 78 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 137
Query: 689 C 691
C
Sbjct: 138 C 138
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 64.5 bits (150), Expect = 8e-11
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +3
Query: 285 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 458
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
Score = 62.1 bits (144), Expect = 4e-10
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + ++V P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 78 LMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 137
Query: 689 C 691
C
Sbjct: 138 C 138
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 63.3 bits (147), Expect = 2e-10
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Frame = +3
Query: 69 IVHLQAGQCGNQIGAKFWEIISDE------HGIDPTGAYHGDSDLQLERINVYYNEASGG 230
IV LQ GQCGNQIG + +++I ++ + ++ + E + ++ +
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 231 QVRAPRHPVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 401
+ A +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 402 SVLDVVRKESESCDCLQGF 458
VLD+V++E E CD L GF
Sbjct: 123 KVLDLVQREVEKCDRLDGF 141
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/59 (30%), Positives = 35/59 (59%)
Frame = +2
Query: 515 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 691
+ +R+ YP+ + V P + + +V+ YNATL++ QL +++D ++N+ L IC
Sbjct: 161 NSLRDFYPNSFIVNNVVWPY-SMGEVIVQNYNATLTLAQLYKSSDAIIIVENDKLQKIC 218
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y R ++V P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 284 LMERLSVDYGKRSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 343
Query: 689 C 691
C
Sbjct: 344 C 344
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 48 NLYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYN 215
++ MRE + + GQ G QIG WE+ EHGI P G H SD +R + +++
Sbjct: 192 SIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFS 249
Query: 216 EASGGQ 233
E + G+
Sbjct: 250 ETASGK 255
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 61.7 bits (143), Expect = 5e-10
Identities = 23/61 (37%), Positives = 42/61 (68%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 688
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 28 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 87
Query: 689 C 691
C
Sbjct: 88 C 88
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 285 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 425
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 679
G +++ + ++YPD T +V PS D + PYN+ L++HQL E+ D I+N+AL
Sbjct: 162 GTYVLNLLHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQAL 220
Query: 680 YDIC 691
DIC
Sbjct: 221 VDIC 224
Score = 35.1 bits (77), Expect = 0.054
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 362
+D+E G ++++ GP +F + SG GNNW
Sbjct: 80 IDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 285 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 425
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGQ 233
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GG+
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 234 VRAPRHP-VDLEPGTMDSVR 290
PR VDLEP + ++
Sbjct: 61 -HVPRAVFVDLEPSVVGRMK 79
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 117 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 218
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 521 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNE 673
+ ++YPD T +V PS D + PYN+ L++HQL E+ D I+N+
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQ 70
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 41.5 bits (93), Expect = 6e-04
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 5/131 (3%)
Frame = +3
Query: 78 LQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPRHPV 257
L GQCGNQIG + ++ + P H D L+ ++ S +V A
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRDGKLRCVCVD------SESKVIASNRRS 57
Query: 258 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDVVR 422
D G GQ R N + G+ G GNN+A G++ G L+ +D +R
Sbjct: 58 D-----------GVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMR 105
Query: 423 KESESCDCLQG 455
KE E CD G
Sbjct: 106 KEVERCDSFAG 116
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 572 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 679
S +SD VV+PYN+ L++ +L +N D +DN AL
Sbjct: 211 SEDISDVVVQPYNSILTLKRLTQNADCVVVLDNTAL 246
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 373 CPLAQLLPAPDCPKTKLSGRKICP 302
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 373 CPLAQLLPAPDCPKTKLSGRKICP 302
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 373 CPLAQLLPAPDCPKTKLSGRKICP 302
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 512 ISKIREEYPDRIMNTYSVVPSPKVS 586
+ K++E+YPD I++++ + P K S
Sbjct: 484 LKKLQEQYPDHILSSFELFPCEKAS 508
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 349 APDCPKTKLSGRKICPKGPERTESMVPGSKST 254
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 337 PKTKLSGRKICPKGPERTESMVPGSKSTGWRG 242
P T++ G+ IC K +R+ ++ GW G
Sbjct: 2178 PDTRVQGKPICGKQTQRSSCQKERQRARGWSG 2209
>SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 517 KDP*RVPRQNHEHILSSPLAQSIR 588
+D RV R+N HI+S+PL Q IR
Sbjct: 245 EDRGRVYRRNRRHIISTPLDQPIR 268
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 529 RVPRQNHEHILSSPLAQSIR 588
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_39714| Best HMM Match : Lipin_N (HMM E-Value=0)
Length = 1311
Score = 27.9 bits (59), Expect = 8.3
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -2
Query: 398 NELSTLCVVSLGPVVAGAGL-SEDEVVRTEDLSERSGADRVHGAGLQVDRMARGTYLPAG 222
+E + CVV +G V G+G+ +D+ V +D S D G G+ D G
Sbjct: 1056 SENDSCCVVDVGGDVNGSGVDGDDDDVDGDDGSGSVDGDDGSGGGVGDDGSGVGD--DDD 1113
Query: 221 GFIVVYIDALQLQVRVPMVGTGGV---DAVLVGDDLPELSSN 105
IVV + + L V V M+ G+ D V D++ L N
Sbjct: 1114 DCIVVLV--MMLDVAVVMIKEEGIYLDDLTSVDDEIARLYLN 1153
>SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 529 RVPRQNHEHILSSPLAQSIR 588
RV R+N HI+S+PL Q IR
Sbjct: 78 RVYRRNRRHIISTPLDQPIR 97
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 529 RVPRQNHEHILSSPLAQSIR 588
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 215 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPELSSN 105
I VY DA++LQV P+ G+D + V D EL +
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVELQGS 85
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 512 ISKIREEYPDRI-MNTYSVVPS-PKVSDTVVEPYNATLSVHQLVE 640
+SKI EY + + + + V+P PK+ D + +P+ L V QL+E
Sbjct: 24 VSKIILEYKEPMAICSQRVLPDWPKIGDRITQPFLDQLMVSQLLE 68
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,407,550
Number of Sequences: 59808
Number of extensions: 500171
Number of successful extensions: 1508
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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