Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20556
(693 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 132 8e-33
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 132 8e-33
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 132 8e-33
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 132 8e-33
X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein... 28 0.24
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 26 1.3
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 25 3.0
AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein prot... 24 4.0
AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 23 6.9
AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein. 23 9.1
AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P... 23 9.1
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 132 bits (320), Expect = 8e-33
Identities = 61/64 (95%), Positives = 62/64 (96%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 679
G LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEAL
Sbjct: 44 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEAL 103
Query: 680 YDIC 691
YDIC
Sbjct: 104 YDIC 107
Score = 63.3 bits (147), Expect = 7e-12
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +3
Query: 372 HYTEGAELVDSVLDVVRKESESCDCLQGFQ 461
HYTEGAELVD+VLDVVRKE E+CDCLQGFQ
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQ 30
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 132 bits (320), Expect = 8e-33
Identities = 61/64 (95%), Positives = 62/64 (96%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 679
G LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEAL
Sbjct: 44 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEAL 103
Query: 680 YDIC 691
YDIC
Sbjct: 104 YDIC 107
Score = 63.3 bits (147), Expect = 7e-12
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +3
Query: 372 HYTEGAELVDSVLDVVRKESESCDCLQGFQ 461
HYTEGAELVD+VLDVVRKE E+CDCLQGFQ
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQ 30
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 132 bits (320), Expect = 8e-33
Identities = 61/64 (95%), Positives = 62/64 (96%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 679
G LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEAL
Sbjct: 44 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEAL 103
Query: 680 YDIC 691
YDIC
Sbjct: 104 YDIC 107
Score = 63.3 bits (147), Expect = 7e-12
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +3
Query: 372 HYTEGAELVDSVLDVVRKESESCDCLQGFQ 461
HYTEGAELVD+VLDVVRKE E+CDCLQGFQ
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQ 30
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 132 bits (320), Expect = 8e-33
Identities = 61/64 (95%), Positives = 62/64 (96%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 679
G LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEAL
Sbjct: 44 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEAL 103
Query: 680 YDIC 691
YDIC
Sbjct: 104 YDIC 107
Score = 63.3 bits (147), Expect = 7e-12
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +3
Query: 372 HYTEGAELVDSVLDVVRKESESCDCLQGFQ 461
HYTEGAELVD+VLDVVRKE E+CDCLQGFQ
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQ 30
>X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein
Agm1 protein.
Length = 498
Score = 28.3 bits (60), Expect = 0.24
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 563 VVPSPKVSDTVVEPYNATLSVHQLVENTDETY 658
V P + S +P N T VHQ +N DET+
Sbjct: 236 VYPDEEKSGETDDPDNPTYLVHQHTQNLDETF 267
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 25.8 bits (54), Expect = 1.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWE 125
MRE + + GQ G QIG W+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 24.6 bits (51), Expect = 3.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 573 RPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTS 689
+P S HT + + T+T TAST R +T S
Sbjct: 150 KPSVSQPSRTHTSTNASSLNATNTRTTKTASTRRTFTNS 188
>AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein
protein.
Length = 385
Score = 24.2 bits (50), Expect = 4.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 199 SMYTTMKPPAGKYVPRAILS 258
++YTTM AG Y RA+L+
Sbjct: 231 ALYTTMLDGAGAYFQRALLT 250
>AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2
protein.
Length = 372
Score = 23.4 bits (48), Expect = 6.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 333 FGQSGAGNNWAKGHYTEGAELVDSVLDVV 419
FG G + G YT +E +D VLD +
Sbjct: 343 FGLEQCGTDGVPGVYTRMSEYMDWVLDTM 371
>AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein.
Length = 458
Score = 23.0 bits (47), Expect = 9.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 151 SMPCSSEMISQNLAPIWLPHWPACR*TIS 65
SM C + ++ I L W CR TIS
Sbjct: 335 SMECFDALRKADIYAIGLIFWEVCRRTIS 363
>AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P450
reductase protein.
Length = 679
Score = 23.0 bits (47), Expect = 9.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 114 KFWEIISDEHGIDPTG 161
KFW + D GI+ TG
Sbjct: 225 KFWPTVCDYFGIESTG 240
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,863
Number of Sequences: 2352
Number of extensions: 17217
Number of successful extensions: 68
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -