Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20555
         (606 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9P055 Cluster: JNK1-associated membrane protein; n=35;...   106   4e-22
UniRef50_Q8SXK7 Cluster: RE11615p; n=2; Sophophora|Rep: RE11615p...    92   8e-18
UniRef50_Q7PXL1 Cluster: ENSANGP00000009664; n=4; Endopterygota|...    82   1e-14
UniRef50_A7RVN2 Cluster: Predicted protein; n=1; Nematostella ve...    68   2e-10
UniRef50_Q9BMT9 Cluster: Seven transmembrane protein; n=3; Caeno...    63   6e-09
UniRef50_Q7QTM9 Cluster: GLP_0_26994_31778; n=1; Giardia lamblia...    33   6.9  
UniRef50_Q90X49 Cluster: Coiled-coil domain-containing protein 8...    32   9.2  
UniRef50_P51559 Cluster: Endoprotease bli-4 precursor; n=13; Chr...    32   9.2  

>UniRef50_Q9P055 Cluster: JNK1-associated membrane protein; n=35;
           Coelomata|Rep: JNK1-associated membrane protein - Homo
           sapiens (Human)
          Length = 326

 Score =  106 bits (255), Expect = 4e-22
 Identities = 43/88 (48%), Positives = 56/88 (63%)
 Frame = +1

Query: 253 VWSDCGACPRGFRTNASSYCMPCVDEPSLYDWQYLGFMVLLPMVLHWFFIDMVTRGKAEN 432
           ++ +CG CPRG RTNA  YC PC + P LYDW YLGFM +LP+VLHWFFI+  + GK  +
Sbjct: 42  IYGECGVCPRGQRTNAQKYCQPCTESPELYDWLYLGFMAMLPLVLHWFFIEWYS-GKKSS 100

Query: 433 GVIIQHMCAFLEVISGTLAALLVLPRLG 516
             + QH+ A  E     +  LLV   +G
Sbjct: 101 SALFQHITALFECSMAAIITLLVSDPVG 128



 Score = 37.5 bits (83), Expect = 0.24
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 513 GSVSLYMCSPKALSDWYTLLHNPQPDY 593
           G + +  C    LSDWYT+L+NP PDY
Sbjct: 128 GVLYIRSCRVLMLSDWYTMLYNPSPDY 154


>UniRef50_Q8SXK7 Cluster: RE11615p; n=2; Sophophora|Rep: RE11615p -
           Drosophila melanogaster (Fruit fly)
          Length = 304

 Score = 92.3 bits (219), Expect = 8e-18
 Identities = 47/95 (49%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
 Frame = +1

Query: 256 WSDCGACPRGFRTNASSYCMPCVDEPSLYDWQYLGFMVLLPMVLHWFFIDMVTRG-KAEN 432
           WS CG CPRG R N S  C PC DE S Y W YLGFM +LP+++H FFIDM  +  K   
Sbjct: 25  WSSCGVCPRGSRVNQSYACSPCRDELSTYSWLYLGFMTMLPLMMHCFFIDMDAKDRKFSR 84

Query: 433 GVIIQHMCAFLEV-ISGTLAALLVLPRLGQSHYIC 534
             +I    AF+EV IS  LA LL+ P      Y C
Sbjct: 85  KQLILTASAFVEVAISAILATLLMEPMWELRLYAC 119



 Score = 39.1 bits (87), Expect = 0.080
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 525 LYMCSPKALSDWYTLLHNPQPDYK 596
           LY C  + L+DWYTL +NP P+Y+
Sbjct: 116 LYACDVRKLTDWYTLFYNPSPNYE 139


>UniRef50_Q7PXL1 Cluster: ENSANGP00000009664; n=4;
           Endopterygota|Rep: ENSANGP00000009664 - Anopheles
           gambiae str. PEST
          Length = 298

 Score = 81.8 bits (193), Expect = 1e-14
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = +1

Query: 259 SDCGACPRGFRTNASSYCMPCVDEPSLYDWQYLGFMVLLPMVLHWFFIDMVTR-GKAENG 435
           S+CGAC RG+R NA   C PC  + + +DW YLGFM +LP+++HWF ID+     K   G
Sbjct: 25  SECGACLRGYRVNAQYVCSPCEKDLTSHDWLYLGFMTILPLIIHWFCIDLNAHLRKFTKG 84

Query: 436 VIIQHMCAFLEVISGTLAALL 498
            +I H  A +EV+      +L
Sbjct: 85  ELILHASACVEVLLSAFLTIL 105



 Score = 37.5 bits (83), Expect = 0.24
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 534 CSPKALSDWYTLLHNPQPDYKEML 605
           C  + +SDWYTL HNP P+Y+  L
Sbjct: 118 CGVQKVSDWYTLFHNPTPNYETTL 141



 Score = 33.9 bits (74), Expect = 3.0
 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
 Frame = +2

Query: 194 MAAVRSCPGLYCGRIELEDG----CGVTVGRVREVSGQTHQVTACRALMNP---LYMTGS 352
           + +V  CPGLYCGR  LE+     CG  + R   V+ Q +  + C   +     LY+ G 
Sbjct: 3   LRSVDKCPGLYCGRTVLENSSLSECGACL-RGYRVNAQ-YVCSPCEKDLTSHDWLYL-GF 59

Query: 353 TLALWSSCPWFCIGFSLTWSPGVKPRMALSYNTCV 457
              L     WFCI  +       K  + L  + CV
Sbjct: 60  MTILPLIIHWFCIDLNAHLRKFTKGELILHASACV 94


>UniRef50_A7RVN2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 306

 Score = 68.1 bits (159), Expect = 2e-10
 Identities = 34/87 (39%), Positives = 48/87 (55%)
 Frame = +1

Query: 244 RRWVWSDCGACPRGFRTNASSYCMPCVDEPSLYDWQYLGFMVLLPMVLHWFFIDMVTRGK 423
           R   +  C ACPRG+R+     C+ C     L+DW YLGF++L  +VLHWFFID   +  
Sbjct: 26  RNGKFGKCQACPRGYRSYGD-LCVKCTKSLRLHDWLYLGFIILTVIVLHWFFIDYFVQRV 84

Query: 424 AENGVIIQHMCAFLEVISGTLAALLVL 504
            +N +++        VI  TLAA+  L
Sbjct: 85  RQNMILL----FVSSVIETTLAAIFTL 107



 Score = 38.7 bits (86), Expect = 0.11
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +3

Query: 513 GSVSLYMCSPKALSDWYTLLHNPQPDY 593
           G+++L  C  + LSDWYT+  NP+PDY
Sbjct: 114 GTLNLTACWTERLSDWYTVFFNPKPDY 140


>UniRef50_Q9BMT9 Cluster: Seven transmembrane protein; n=3;
           Caenorhabditis|Rep: Seven transmembrane protein -
           Caenorhabditis elegans
          Length = 326

 Score = 62.9 bits (146), Expect = 6e-09
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = +1

Query: 259 SDCGACPRGFRTNASSYCMPCVDEPSLYDWQYLGFMVLLPMVLHWFFIDMVTR-GKAENG 435
           S CG C  G+R NA S C  C      YDW YL F+ LLP++LH  FI +  +  +    
Sbjct: 45  SRCGPCSFGYRNNAMSICESCDTPLQPYDWMYLLFIALLPLLLHMQFIRIARKYCRTRYY 104

Query: 436 VIIQHMCAFLEVISGTLAALLVLP 507
            + +++C  LE +   + A+L+ P
Sbjct: 105 EVSEYLCVILENVIACVIAVLIYP 128


>UniRef50_Q7QTM9 Cluster: GLP_0_26994_31778; n=1; Giardia lamblia ATCC
            50803|Rep: GLP_0_26994_31778 - Giardia lamblia ATCC 50803
          Length = 1594

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 544  KHFRIGIHCCIIHSQIIKRC 603
            KH+ +  HCC+I SQ I RC
Sbjct: 980  KHYEVRFHCCLIGSQTILRC 999


>UniRef50_Q90X49 Cluster: Coiled-coil domain-containing protein 80
           precursor; n=4; Danio rerio|Rep: Coiled-coil
           domain-containing protein 80 precursor - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 867

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 291 PETSRTRPTVTPHPSSSSIRPQYSPGHDLTA 199
           P T+ TR T TP  + ++  PQ+ P H  TA
Sbjct: 350 PTTTTTRTTTTPRTTRANTTPQWIPAHKTTA 380


>UniRef50_P51559 Cluster: Endoprotease bli-4 precursor; n=13;
           Chromadorea|Rep: Endoprotease bli-4 precursor -
           Caenorhabditis elegans
          Length = 943

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 265 CGACPRGFRTNASSYCMPCVDEPSLYDWQ 351
           C  C +G+   +  YC PC  E S   WQ
Sbjct: 825 CEKCSKGYGKGSIGYCRPCCPEGSTKSWQ 853


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,218,894
Number of Sequences: 1657284
Number of extensions: 13106675
Number of successful extensions: 36671
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36657
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)