Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20555
         (606 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089582-1|AAL90320.1|  304|Drosophila melanogaster RE11615p pro...    92   5e-19
AE014297-4808|AAF57197.2|  304|Drosophila melanogaster CG2126-PA...    92   5e-19
BT016111-1|AAV36996.1| 1049|Drosophila melanogaster LD11955p pro...    29   6.5  
AE014134-3020|AAF53743.1| 1049|Drosophila melanogaster CG17492-P...    29   6.5  
AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p pro...    28   8.6  
AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA...    28   8.6  

>AY089582-1|AAL90320.1|  304|Drosophila melanogaster RE11615p
           protein.
          Length = 304

 Score = 92.3 bits (219), Expect = 5e-19
 Identities = 47/95 (49%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
 Frame = +1

Query: 256 WSDCGACPRGFRTNASSYCMPCVDEPSLYDWQYLGFMVLLPMVLHWFFIDMVTRG-KAEN 432
           WS CG CPRG R N S  C PC DE S Y W YLGFM +LP+++H FFIDM  +  K   
Sbjct: 25  WSSCGVCPRGSRVNQSYACSPCRDELSTYSWLYLGFMTMLPLMMHCFFIDMDAKDRKFSR 84

Query: 433 GVIIQHMCAFLEV-ISGTLAALLVLPRLGQSHYIC 534
             +I    AF+EV IS  LA LL+ P      Y C
Sbjct: 85  KQLILTASAFVEVAISAILATLLMEPMWELRLYAC 119



 Score = 39.1 bits (87), Expect = 0.005
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 525 LYMCSPKALSDWYTLLHNPQPDYK 596
           LY C  + L+DWYTL +NP P+Y+
Sbjct: 116 LYACDVRKLTDWYTLFYNPSPNYE 139


>AE014297-4808|AAF57197.2|  304|Drosophila melanogaster CG2126-PA
           protein.
          Length = 304

 Score = 92.3 bits (219), Expect = 5e-19
 Identities = 47/95 (49%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
 Frame = +1

Query: 256 WSDCGACPRGFRTNASSYCMPCVDEPSLYDWQYLGFMVLLPMVLHWFFIDMVTRG-KAEN 432
           WS CG CPRG R N S  C PC DE S Y W YLGFM +LP+++H FFIDM  +  K   
Sbjct: 25  WSSCGVCPRGSRVNQSYACSPCRDELSTYSWLYLGFMTMLPLMMHCFFIDMDAKDRKFSR 84

Query: 433 GVIIQHMCAFLEV-ISGTLAALLVLPRLGQSHYIC 534
             +I    AF+EV IS  LA LL+ P      Y C
Sbjct: 85  KQLILTASAFVEVAISAILATLLMEPMWELRLYAC 119



 Score = 39.1 bits (87), Expect = 0.005
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 525 LYMCSPKALSDWYTLLHNPQPDYK 596
           LY C  + L+DWYTL +NP P+Y+
Sbjct: 116 LYACDVRKLTDWYTLFYNPSPNYE 139


>BT016111-1|AAV36996.1| 1049|Drosophila melanogaster LD11955p
           protein.
          Length = 1049

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 245 EDGCGVTVGRVREVSGQTHQVTACRALMNPLYMTGST 355
           +DG     GRV E+ G  ++  +CR++ N  ++TGST
Sbjct: 170 QDGGEGRTGRVMEIRGWDNE--SCRSVANVAWVTGST 204


>AE014134-3020|AAF53743.1| 1049|Drosophila melanogaster CG17492-PA
           protein.
          Length = 1049

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 245 EDGCGVTVGRVREVSGQTHQVTACRALMNPLYMTGST 355
           +DG     GRV E+ G  ++  +CR++ N  ++TGST
Sbjct: 170 QDGGEGRTGRVMEIRGWDNE--SCRSVANVAWVTGST 204


>AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p
           protein.
          Length = 595

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 297 VCPETSRT-RPTVTPHPSSSSIRPQYSPG 214
           V P TS T RP   P P+SS + P  +PG
Sbjct: 433 VAPTTSTTKRPKPKPKPTSSPLSPTSAPG 461


>AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA
           protein.
          Length = 595

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 297 VCPETSRT-RPTVTPHPSSSSIRPQYSPG 214
           V P TS T RP   P P+SS + P  +PG
Sbjct: 433 VAPTTSTTKRPKPKPKPTSSPLSPTSAPG 461


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,701,965
Number of Sequences: 53049
Number of extensions: 642186
Number of successful extensions: 1831
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1831
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)