Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20552
         (795 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    26   0.40 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   6.5  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   6.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.6  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 730 WARQIKSKSCLLRNLLTTSGPKVNETPRSFSPQ 632
           W  + K K C    +     PKVNET  +  P+
Sbjct: 153 WPDEAKKKGCSSEEVFQFECPKVNETVAATHPR 185


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +3

Query: 171 FVVIYMVSTQICY--VSLNMEDFR 236
           F++I ++ T +CY  + LN + FR
Sbjct: 502 FIIIPVILTSVCYFMIGLNSQGFR 525


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 570 VPDTGLLCDLLWSDPDKDVQGWGENDRG-VSFTFGPDVVSKF 692
           V +TG+  +  WSD ++ +  +G  ++G V+FT G D+   F
Sbjct: 396 VQETGI--ENWWSDGNQQI-AFGRGNKGFVAFTIGYDLNQHF 434


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +3

Query: 573 PDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICR 725
           P      + +WSDP  DV          SFT   DV ++ LN H   L+ R
Sbjct: 570 PRAAAFAERVWSDPQLDV---------TSFTIQEDVYTR-LNTHRDRLVAR 610


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +1

Query: 538 NRSEE*CDPLMFQIQDCFVTCCG-QIP 615
           NR+ + CDP    + DCF +  G +IP
Sbjct: 157 NRAPD-CDPTQCVLPDCFCSADGTRIP 182


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 367 CASINRIYGF 396
           C S+NRI+GF
Sbjct: 527 CDSVNRIFGF 536


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -1

Query: 495 NLLINYSSNWQAVKAIRESLPQFYIVSAFALVIKTINAVYAS 370
           NLL +Y S     K IR S      V+        +N VY+S
Sbjct: 129 NLLKHYQSTTDLHKKIRYSAFGMIFVALLEHCFSMLNYVYSS 170


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +3

Query: 642 NDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFF 761
           N     F   PD + K   +    ++   HQ VE   EF+
Sbjct: 137 NPEPADFADAPDAIGKTRTKDKYRVVYTDHQRVELEKEFY 176


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +1

Query: 556 CDPLMFQIQDCFVTCCG-QIP 615
           CDP    + DCF +  G +IP
Sbjct: 155 CDPTQCVLPDCFCSADGTRIP 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,456
Number of Sequences: 336
Number of extensions: 5570
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)