Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20552
         (795 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    31   0.012
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    31   0.012
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    29   0.038
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          25   0.61 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   1.9  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   3.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   3.3  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    23   4.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   4.3  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   7.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   10.0 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   10.0 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   10.0 

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 31.1 bits (67), Expect = 0.012
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -2

Query: 134 AAGIFLWILCRAHVPLPPTFAQ 69
           A GI  W LC  HV LP TF Q
Sbjct: 778 AFGILFWYLCAGHVRLPYTFEQ 799


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 31.1 bits (67), Expect = 0.012
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -2

Query: 134 AAGIFLWILCRAHVPLPPTFAQ 69
           A GI  W LC  HV LP TF Q
Sbjct: 816 AFGILFWYLCAGHVRLPYTFEQ 837


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 29.5 bits (63), Expect = 0.038
 Identities = 17/89 (19%), Positives = 37/89 (41%)
 Frame = -1

Query: 624 HPYRDLTTASHKAILYLEHQWVALFF*SVPFPVNLETNHMATENLLINYSSNWQAVKAIR 445
           HP R   +   +AI  +   W+     ++PF   ++ N++         S        ++
Sbjct: 138 HPLRHYRSGLKRAIRSIFGAWLIALIFAMPFATYVDINYVEYPQNSKRNSEESAICAMLK 197

Query: 444 ESLPQFYIVSAFALVIKTINAVYASTLMI 358
           E++P+F +     ++   I  V+ + L I
Sbjct: 198 ENMPEFPLYQLSCILFFLIPMVFIAVLYI 226


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = -3

Query: 658 ETPRSFSPQP*TSLSGSDHSKSQSNPVSGTS 566
           E   S  PQP  SL GS  S S  +PVS  S
Sbjct: 50  ENTISSVPQPPRSLEGSYDSSSGDSPVSSHS 80


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
 Frame = +3

Query: 534 MEQIRRIMRPTDVPDTGLLCDLLWSDPD---KDVQGWGENDRGV-SFTFGPDVVSKFLNR 701
           +E   +I  P  +P  G   DL  S PD     V    EN + V     GP +V   ++ 
Sbjct: 38  LELAEKIPGPPALPLIGNALDLFGS-PDAMFSQVLKKAENFKDVVKIWVGPKLVICLIDP 96

Query: 702 HDLDLICRAHQVVEDGYEFFANECWL 779
            D+++I  ++  ++   E+   + WL
Sbjct: 97  RDVEIILSSNVYIDKSTEYRFFKPWL 122


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 624 VQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRA 728
           VQ W      + F   P +   FL +H LDL+  A
Sbjct: 333 VQQWNSYWGILGFPSAPTIDGIFLPKHPLDLLREA 367


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 624 VQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRA 728
           VQ W      + F   P +   FL +H LDL+  A
Sbjct: 333 VQQWNSYWGILGFPSAPTIDGIFLPKHPLDLLREA 367


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/19 (47%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +1

Query: 742 KMDMNFS-QTNVGYFVFCT 795
           ++ ++F  Q N+GYFVF T
Sbjct: 230 RLSLSFKLQRNIGYFVFQT 248


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 78  CRRQRYVGSAQNP 116
           CRRQRY  +A NP
Sbjct: 101 CRRQRYNIAAANP 113


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 507 MATENLLINYSSN 469
           M  ENLL+NY +N
Sbjct: 39  MVLENLLMNYENN 51


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 577 SGTSVGRIILLICSIPCKSGD 515
           +G ++ R+I  +CS  CK  D
Sbjct: 230 TGCTITRVIPQVCSGNCKLND 250


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 674 GSKSKRDAAIVFPPTLNILIGI*PQQVTKQS 582
           GS +     +  PPTLN++  I   ++ KQ+
Sbjct: 22  GSTTPASPTLSTPPTLNLMEQILLAKIEKQN 52


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 577 SGTSVGRIILLICSIPCKSGD 515
           +G ++ R+I  +CS  CK  D
Sbjct: 230 TGCTITRVIPQVCSGNCKLND 250


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,293
Number of Sequences: 438
Number of extensions: 5841
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)