Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20551
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.4  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   5.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   5.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.8  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 127 DKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEAD 231
           D IR ++  RF    +V    EQ+TL  +++ E+D
Sbjct: 331 DIIRIDRNTRFNQDKIVALRQEQETLKSQVQRESD 365


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 168 NIFKSLLLIFSNFIWIT 118
           N++  LLL+F  ++WI+
Sbjct: 121 NLYMVLLLLFDAYLWIS 137


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 174 CGCSRRARHLVEEIAPRS*QFQ*TEECCSKEIG 272
           C C+  A+   EE AP+       E C  K+ G
Sbjct: 14  CACTVFAQQQAEETAPKKEDSFEVELCKDKDAG 46


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 282 KNKEPSGSEDEPVPSEIANN 341
           KN+E +G    P P E++N+
Sbjct: 147 KNEEVAGGFTCPAPGEVSNS 166


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 282 KNKEPSGSEDEPVPSEIANN 341
           KN+E +G    P P E++N+
Sbjct: 147 KNEEVAGGFTCPAPGEVSNS 166


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 10  TCLIILKNISTYVIYLS*INNVNMV 84
           TC  I+  ++TY++ L   NN + V
Sbjct: 348 TCEEIVAGVTTYLVILIQFNNSDFV 372


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,493
Number of Sequences: 336
Number of extensions: 3259
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)