Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20551
(721 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91257-1|CAA62635.1| 514|Homo sapiens seryl-tRNA synthetase pro... 100 6e-21
D49914-1|BAA95602.1| 514|Homo sapiens Seryl tRNA Synthetase pro... 100 6e-21
BC111398-1|AAI11399.1| 511|Homo sapiens SARS protein protein. 100 6e-21
BC009390-1|AAH09390.1| 514|Homo sapiens seryl-tRNA synthetase p... 100 6e-21
BC000716-1|AAH00716.1| 514|Homo sapiens seryl-tRNA synthetase p... 100 6e-21
AL356389-5|CAI13600.1| 536|Homo sapiens seryl-tRNA synthetase p... 100 6e-21
AL356389-4|CAI13599.1| 514|Homo sapiens seryl-tRNA synthetase p... 100 6e-21
AK222677-1|BAD96397.1| 514|Homo sapiens seryl-tRNA synthetase v... 100 6e-21
BC042912-1|AAH42912.1| 518|Homo sapiens seryl-tRNA synthetase 2... 31 4.1
AK000457-1|BAA91176.1| 518|Homo sapiens protein ( Homo sapiens ... 31 4.1
AB029948-1|BAA99557.1| 518|Homo sapiens mitochondrial seryl-tRN... 31 4.1
AF275150-1|AAF91411.1| 1115|Homo sapiens transmembrane-type prot... 31 5.5
BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein. 30 7.3
AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndr... 30 7.3
AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein. 30 7.3
AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein. 30 7.3
AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory p... 30 7.3
AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein. 30 7.3
AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein. 30 7.3
>X91257-1|CAA62635.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 100 bits (239), Expect = 6e-21
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 509 VPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVF 685
VP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG VF
Sbjct: 143 VPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVF 202
Query: 686 LEQALVQLSLR 718
LEQAL+Q +LR
Sbjct: 203 LEQALIQYALR 213
Score = 76.6 bits (180), Expect = 8e-14
Identities = 45/85 (52%), Positives = 53/85 (62%)
Frame = +3
Query: 255 CSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKN 434
CSK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K
Sbjct: 60 CSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAILKC 117
Query: 435 DEGLLAAEKARSAALREVGNHLHES 509
D + E R LRE+GN LH S
Sbjct: 118 DAERIKLEAERFENLREIGNLLHPS 142
Score = 71.7 bits (168), Expect = 2e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +1
Query: 79 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 234
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADN 52
>D49914-1|BAA95602.1| 514|Homo sapiens Seryl tRNA Synthetase
protein.
Length = 514
Score = 100 bits (239), Expect = 6e-21
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 509 VPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVF 685
VP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG VF
Sbjct: 143 VPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVF 202
Query: 686 LEQALVQLSLR 718
LEQAL+Q +LR
Sbjct: 203 LEQALIQYALR 213
Score = 76.6 bits (180), Expect = 8e-14
Identities = 45/85 (52%), Positives = 53/85 (62%)
Frame = +3
Query: 255 CSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKN 434
CSK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K
Sbjct: 60 CSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAILKC 117
Query: 435 DEGLLAAEKARSAALREVGNHLHES 509
D + E R LRE+GN LH S
Sbjct: 118 DAERIKLEAERFENLREIGNLLHPS 142
Score = 71.7 bits (168), Expect = 2e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +1
Query: 79 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 234
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADN 52
>BC111398-1|AAI11399.1| 511|Homo sapiens SARS protein protein.
Length = 511
Score = 100 bits (239), Expect = 6e-21
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 509 VPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVF 685
VP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG VF
Sbjct: 143 VPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVF 202
Query: 686 LEQALVQLSLR 718
LEQAL+Q +LR
Sbjct: 203 LEQALIQYALR 213
Score = 76.6 bits (180), Expect = 8e-14
Identities = 45/85 (52%), Positives = 53/85 (62%)
Frame = +3
Query: 255 CSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKN 434
CSK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K
Sbjct: 60 CSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAILKC 117
Query: 435 DEGLLAAEKARSAALREVGNHLHES 509
D + E R LRE+GN LH S
Sbjct: 118 DAERIKLEAERFENLREIGNLLHPS 142
Score = 71.7 bits (168), Expect = 2e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +1
Query: 79 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 234
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADN 52
>BC009390-1|AAH09390.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 100 bits (239), Expect = 6e-21
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 509 VPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVF 685
VP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG VF
Sbjct: 143 VPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVF 202
Query: 686 LEQALVQLSLR 718
LEQAL+Q +LR
Sbjct: 203 LEQALIQYALR 213
Score = 76.6 bits (180), Expect = 8e-14
Identities = 45/85 (52%), Positives = 53/85 (62%)
Frame = +3
Query: 255 CSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKN 434
CSK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K
Sbjct: 60 CSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAILKC 117
Query: 435 DEGLLAAEKARSAALREVGNHLHES 509
D + E R LRE+GN LH S
Sbjct: 118 DAERIKLEAERFENLREIGNLLHPS 142
Score = 71.7 bits (168), Expect = 2e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +1
Query: 79 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 234
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADN 52
>BC000716-1|AAH00716.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 100 bits (239), Expect = 6e-21
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 509 VPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVF 685
VP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG VF
Sbjct: 143 VPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVF 202
Query: 686 LEQALVQLSLR 718
LEQAL+Q +LR
Sbjct: 203 LEQALIQYALR 213
Score = 76.6 bits (180), Expect = 8e-14
Identities = 45/85 (52%), Positives = 53/85 (62%)
Frame = +3
Query: 255 CSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKN 434
CSK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K
Sbjct: 60 CSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAILKC 117
Query: 435 DEGLLAAEKARSAALREVGNHLHES 509
D + E R LRE+GN LH S
Sbjct: 118 DAERIKLEAERFENLREIGNLLHPS 142
Score = 71.7 bits (168), Expect = 2e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +1
Query: 79 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 234
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADN 52
>AL356389-5|CAI13600.1| 536|Homo sapiens seryl-tRNA synthetase
protein.
Length = 536
Score = 100 bits (239), Expect = 6e-21
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 509 VPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVF 685
VP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG VF
Sbjct: 143 VPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVF 202
Query: 686 LEQALVQLSLR 718
LEQAL+Q +LR
Sbjct: 203 LEQALIQYALR 213
Score = 76.6 bits (180), Expect = 8e-14
Identities = 45/85 (52%), Positives = 53/85 (62%)
Frame = +3
Query: 255 CSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKN 434
CSK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K
Sbjct: 60 CSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAILKC 117
Query: 435 DEGLLAAEKARSAALREVGNHLHES 509
D + E R LRE+GN LH S
Sbjct: 118 DAERIKLEAERFENLREIGNLLHPS 142
Score = 71.7 bits (168), Expect = 2e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +1
Query: 79 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 234
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADN 52
>AL356389-4|CAI13599.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 100 bits (239), Expect = 6e-21
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 509 VPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVF 685
VP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG VF
Sbjct: 143 VPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVF 202
Query: 686 LEQALVQLSLR 718
LEQAL+Q +LR
Sbjct: 203 LEQALIQYALR 213
Score = 76.6 bits (180), Expect = 8e-14
Identities = 45/85 (52%), Positives = 53/85 (62%)
Frame = +3
Query: 255 CSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKN 434
CSK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K
Sbjct: 60 CSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAILKC 117
Query: 435 DEGLLAAEKARSAALREVGNHLHES 509
D + E R LRE+GN LH S
Sbjct: 118 DAERIKLEAERFENLREIGNLLHPS 142
Score = 71.7 bits (168), Expect = 2e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +1
Query: 79 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 234
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADN 52
>AK222677-1|BAD96397.1| 514|Homo sapiens seryl-tRNA synthetase
variant protein.
Length = 514
Score = 100 bits (239), Expect = 6e-21
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 509 VPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVF 685
VP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG VF
Sbjct: 143 VPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVF 202
Query: 686 LEQALVQLSLR 718
LEQAL+Q +LR
Sbjct: 203 LEQALIQYALR 213
Score = 76.6 bits (180), Expect = 8e-14
Identities = 45/85 (52%), Positives = 53/85 (62%)
Frame = +3
Query: 255 CSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKN 434
CSK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K
Sbjct: 60 CSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAILKC 117
Query: 435 DEGLLAAEKARSAALREVGNHLHES 509
D + E R LRE+GN LH S
Sbjct: 118 DAERIKLEAERFENLREIGNLLHPS 142
Score = 71.7 bits (168), Expect = 2e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +1
Query: 79 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 234
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADN 52
>BC042912-1|AAH42912.1| 518|Homo sapiens seryl-tRNA synthetase 2,
mitochondrial protein.
Length = 518
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 509 VPVDDDEDHNLVERTDGDCGFR-KKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVF 685
VPV D+ ++ F + H+++ +D + +R S V+G R YYL+G
Sbjct: 178 VPVGDESQARVLHMVGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGAL 237
Query: 686 LEQALVQLS 712
L+ LV +
Sbjct: 238 LQHGLVNFT 246
>AK000457-1|BAA91176.1| 518|Homo sapiens protein ( Homo sapiens
cDNA FLJ20450 fis, clone KAT05607. ).
Length = 518
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 509 VPVDDDEDHNLVERTDGDCGFR-KKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVF 685
VPV D+ ++ F + H+++ +D + +R S V+G R YYL+G
Sbjct: 178 VPVGDESQARVLHMVGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGAL 237
Query: 686 LEQALVQLS 712
L+ LV +
Sbjct: 238 LQHGLVNFT 246
>AB029948-1|BAA99557.1| 518|Homo sapiens mitochondrial seryl-tRNA
synthetase protein.
Length = 518
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 509 VPVDDDEDHNLVERTDGDCGFR-KKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVF 685
VPV D+ ++ F + H+++ +D + +R S V+G R YYL+G
Sbjct: 178 VPVGDESQARVLHMVGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGAL 237
Query: 686 LEQALVQLS 712
L+ LV +
Sbjct: 238 LQHGLVNFT 246
>AF275150-1|AAF91411.1| 1115|Homo sapiens transmembrane-type protein
tyrosine phosphatase H protein.
Length = 1115
Score = 30.7 bits (66), Expect = 5.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 509 VPVDDDEDHNLVERTDGDCGFRKKYSHVDLI 601
+P +D DH D +CGF KY + L+
Sbjct: 800 IPAEDFADHVRKNERDSNCGFADKYQQLSLV 830
>BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 106 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 195
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndrome
1 (nibrin) protein.
Length = 754
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 106 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 195
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein.
Length = 754
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 106 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 195
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 106 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 195
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory
protein p95 protein.
Length = 754
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 106 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 195
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 106 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 195
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein.
Length = 754
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 106 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 195
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,832,144
Number of Sequences: 237096
Number of extensions: 1817197
Number of successful extensions: 4431
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4423
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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