Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20551
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-1|CAA93105.1| 487|Caenorhabditis elegans Hypothetical pr... 104 7e-23
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 31 0.83
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 29 3.3
AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical... 29 4.4
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical pr... 28 7.7
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF026209-11|AAB71282.1| 353|Caenorhabditis elegans Seven tm rec... 28 7.7
>Z68882-1|CAA93105.1| 487|Caenorhabditis elegans Hypothetical
protein C47E12.1 protein.
Length = 487
Score = 104 bits (249), Expect = 7e-23
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = +2
Query: 509 VPVDDDEDHNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVFL 688
V V DE +N +ERT GD +KKYSHVDL+ M+DG DGERG+ VAGGRGY+LKGP VFL
Sbjct: 144 VVVSKDEANNKIERTFGDLSTKKKYSHVDLVVMVDGFDGERGTVVAGGRGYFLKGPLVFL 203
Query: 689 EQALVQLSLR 718
EQA++QL+L+
Sbjct: 204 EQAIIQLALQ 213
Score = 67.7 bits (158), Expect = 8e-12
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = +3
Query: 258 SKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKND 437
SK IG KMK KEP G++D V +I L L D L LTV Q+KK+RVL+D +
Sbjct: 61 SKAIGEKMKKKEPQGTDDS-VADDIVARLAELKIDELSQLTVVQLKKLRVLVDEKSVQTA 119
Query: 438 EGLLAAEKARSAALREVGNHLHES 509
++A E AR L ++GN +H S
Sbjct: 120 AAVIANENARHEKLIQIGNLIHSS 143
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +1
Query: 79 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEAD 231
MVLD+D+FR +K GNP+ IR++Q+ RFKD LVD V+E D WRK R AD
Sbjct: 1 MVLDIDMFRTEKGGNPEIIRKSQQDRFKDPKLVDEVIELDEKWRKERFVAD 51
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical protein
ZC434.5 protein.
Length = 1149
Score = 31.1 bits (67), Expect = 0.83
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +3
Query: 201 LVEEIAPRS*QFQ*TEECCSKEIGLKMKNKEPSGSEDEPVPSEIA 335
LV E+ + + Q T++ +K + LK + K+ +GS+ +P P+++A
Sbjct: 1027 LVRELKMKDAKSQETKDAIAKLLQLKKQYKDATGSDYKPAPAQLA 1071
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +3
Query: 288 KEPSGSEDEPVPSEIANNLVNLTGDNLKPL--TVNQIKKVRVLIDNAISKNDEGLLAAEK 461
K+P+G ++ E A + N+T KPL V ++ + +++ + N + AE
Sbjct: 563 KKPTGEPEQIKEEEAAEKISNITISKTKPLKKAVTKVSAAKKILNKKLKVNTKKTFGAED 622
Query: 462 ARSAALREVGNHLHESYQLMMMK 530
L E G SY L + K
Sbjct: 623 DELEELEE-GPSTITSYGLDIEK 644
>AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical
protein Y48G1C.8 protein.
Length = 828
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 318 VPSEIANNLVNLTGDNLKPLTVN 386
VP+ N +N TGD L P TVN
Sbjct: 444 VPANFVANQINHTGDGLSPWTVN 466
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 106 ADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 234
+ K +P +I ++Q DV D +VEQD K RH ++N
Sbjct: 767 SQKPIDPQEISDDQDDTVPDVP--DQIVEQDNQSHKSRHNSEN 807
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 106 ADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 234
+ K +P +I ++Q DV D +VEQD K RH ++N
Sbjct: 764 SQKPIDPQEISDDQDDTVPDVP--DQIVEQDNQSHKSRHNSEN 804
>Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical
protein D1081.3 protein.
Length = 752
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 145 DFLEFYLDYRLYRHEISLSRGPC 77
DF E+Y D R Y +EI G C
Sbjct: 206 DFYEYYFDLRRYNNEICAFSGVC 228
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
protein F45E4.4 protein.
Length = 2361
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 214 LRHEADNFXXXXXXXXXXXXXXXRTRNPVALKTNPSPRRSP 336
+RHE ++ R R+ +A+ TNPSP SP
Sbjct: 1 MRHEEQSYGLFSFFTSSKRSVSDRPRSALAMFTNPSPSASP 41
>AF026209-11|AAB71282.1| 353|Caenorhabditis elegans Seven tm
receptor protein 262 protein.
Length = 353
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 332 DLRGDGFVFRATGFLVLHFQTNFFATTFFSLLKLSASW 219
DL GF + L LHF FF+ T LK+ SW
Sbjct: 90 DLLFVGFFGTSMSILALHFIYRFFSVTNSRYLKIFDSW 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,220,659
Number of Sequences: 27780
Number of extensions: 304056
Number of successful extensions: 964
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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