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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20549
         (717 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g66680.1 68418.m08406 dolichyl-diphosphooligosaccharide-prote...    79   4e-15
At2g07240.1 68415.m00831 Ulp1 protease family protein contains P...    29   2.3  
At5g27870.1 68418.m03343 pectinesterase family protein similar t...    29   3.1  
At5g61420.2 68418.m07707 myb family transcription factor (MYB28)...    28   5.4  
At5g61420.1 68418.m07706 myb family transcription factor (MYB28)...    28   5.4  
At3g06500.1 68416.m00754 beta-fructofuranosidase, putative / inv...    28   5.4  
At2g42330.1 68415.m05239 D111/G-patch domain-containing protein ...    28   7.1  
At2g45210.1 68415.m05629 auxin-responsive protein-related weakly...    27   9.4  

>At5g66680.1 68418.m08406 dolichyl-diphosphooligosaccharide-protein
           glycosyltransferase 48kDa subunit family protein similar
           to SP|Q05052 Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase 48 kDa subunit precursor (EC
           2.4.1.119) (Oligosaccharyl transferase 48 kDa subunit)
           {Canis familiaris}; contains Pfam profile PF03345:
           Dolichyl-diphosphooligosaccharide-protein
           glycosyltransferase 48kD subunit
          Length = 437

 Score = 78.6 bits (185), Expect = 4e-15
 Identities = 33/60 (55%), Positives = 46/60 (76%)
 Frame = +2

Query: 77  DHETLVLIDNLNIKETHSQFFKSLQERGYGLTFKLADDANLVLSKYGEYLYKNLIVFAPS 256
           D   LVL+D+L++K +HS FF +L+ RG+ L FKLA+D+ L L +YG+YLY  LI+FAPS
Sbjct: 30  DRRVLVLLDDLSLKSSHSIFFNTLKSRGFDLDFKLAEDSKLALQRYGQYLYDGLIIFAPS 89



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
 Frame = +1

Query: 265 FGGQVDSEAITKFIDDXXXXXXXXXXXXXDVYREIASECGFEMDEESAA-VIDHFNYDVT 441
           FGG +DS++I  F+D              D+ R IA+ECG + DE+S+A VIDH ++ V+
Sbjct: 93  FGGSLDSKSIADFVDSGRDLILSADTAASDLIRGIATECGVDFDEDSSAMVIDHTSFSVS 152

Query: 442 D-EGDHTRI---------VVSPKNLIKAPTIVENRIHSL 528
           D +GDHT I         V+  K  I+AP +     HSL
Sbjct: 153 DVDGDHTLIAADDLVKSDVILGKTKIEAPVLFRGVAHSL 191



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = +3

Query: 525 PLLFEGTGLIVDKDNSLVLPILSADSTAYSYNPKSQVKEYP 647
           P+LF G    ++  N+LVL +LSA  +AYS NP S++   P
Sbjct: 181 PVLFRGVAHSLNPTNNLVLKVLSASPSAYSANPSSKLSSPP 221



 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 644 PHAVGRKTVLIAALQARNNARIV 712
           P   G    L++ +QARNNAR+V
Sbjct: 221 PQLTGSSISLVSVMQARNNARVV 243


>At2g07240.1 68415.m00831 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain
          Length = 928

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +2

Query: 626 ESGERVPHAVGRKTVLIAALQARNNAR 706
           E GERV +  G KT ++  ++A++NAR
Sbjct: 221 EDGERVDNMTGGKTKVVRGMKAQSNAR 247


>At5g27870.1 68418.m03343 pectinesterase family protein similar to
           pectinesterase (EC 3.1.1.11) from Salix gilgiana
           GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
           vulgaris SP|Q43111; contains Pfam profile PF01095
           pectinesterase
          Length = 732

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 24/81 (29%), Positives = 41/81 (50%)
 Frame = -2

Query: 509 STIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSISNPHSEAISLYTSPAAALPA 330
           ST+ G+ +    +TT    SPS+V +      T+  +  + +P S+  S   SP+ +LPA
Sbjct: 571 STVTGSSLS--SNTTESSDSPSTVVT----PSTSPPAGHLGSP-SDTPSSVVSPSTSLPA 623

Query: 329 IRRFPPSSMNLVMASLSTCPP 267
            +   P +   ++ S ST PP
Sbjct: 624 GQLGAPPATPSMVVSPSTSPP 644


>At5g61420.2 68418.m07707 myb family transcription factor (MYB28)
           contains Pfam profile: PF00249 myb-like DNA-binding
           domain
          Length = 366

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/50 (26%), Positives = 30/50 (60%)
 Frame = -2

Query: 395 SISNPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTKVR 246
           ++++P++ +     S ++++P + R PPSS N+V + +S    N  T ++
Sbjct: 140 NLNSPNASSSDKQYSRSSSMPFLSRPPPSSCNMV-SKVSELSSNDGTPIQ 188


>At5g61420.1 68418.m07706 myb family transcription factor (MYB28)
           contains Pfam profile: PF00249 myb-like DNA-binding
           domain
          Length = 287

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/50 (26%), Positives = 30/50 (60%)
 Frame = -2

Query: 395 SISNPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTKVR 246
           ++++P++ +     S ++++P + R PPSS N+V + +S    N  T ++
Sbjct: 61  NLNSPNASSSDKQYSRSSSMPFLSRPPPSSCNMV-SKVSELSSNDGTPIQ 109


>At3g06500.1 68416.m00754 beta-fructofuranosidase, putative /
           invertase, putative / saccharase, putative /
           beta-fructosidase, putative similar to neutral invertase
           [Daucus carota] GI:4200165; contains Pfam profile
           PF04853: Plant neutral invertase
          Length = 664

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -1

Query: 441 SHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSGRGVTSHK 325
           S I V  +  CCRFL+  +S+    FS   SG+ + S K
Sbjct: 5   SCICVSAMKPCCRFLISFRSSSLFGFSPPNSGKFINSSK 43


>At2g42330.1 68415.m05239 D111/G-patch domain-containing protein
           similar to SP|Q9ERA6 Tuftelin-interacting protein 11
           {Mus musculus}; contains Pfam profile PF01585: G-patch
           domain
          Length = 752

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
 Frame = -2

Query: 521 CILFSTIVGALIRFLGDTTMRVWSPSS-----VTS*LKWSMT--AADSSSISNPHSEAIS 363
           C   S I  +L   L     + W P S     + +   W M     D+ SIS P+S+ +S
Sbjct: 343 CCNLSCIASSLALPLFIRMFQGWDPLSDAEHGIEAISSWKMLLEVEDNQSISTPYSQLVS 402

Query: 362 LYTSPAAALPAIRRFPPSSMNLVMASLST 276
               PA  +  I  + P     ++  L T
Sbjct: 403 EVILPAVRVSGINTWEPRDPEPMLRLLET 431


>At2g45210.1 68415.m05629 auxin-responsive protein-related weakly
           similar to small auxin up RNA (GI:546362) {Arabidopsis
           thaliana}
          Length = 162

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
 Frame = -1

Query: 363 SIYVSGRGVTSHKKVSAIVYEFGYGLTVYLSTKLE------HEGANTMRFLYKYSPYFDR 202
           +IYV  +    H+ +  IVY F + L   L  + E      HEG  T+  LY       +
Sbjct: 85  AIYVGQKDGDCHRVLVPIVY-FNHPLFGELLREAEKEYGFCHEGGITIPCLYSDFERV-K 142

Query: 201 TRFASSASLKVKP*PRSCND 142
           TR AS +S +V P  R C +
Sbjct: 143 TRIASGSSSRVFPWGRHCRN 162


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,983,139
Number of Sequences: 28952
Number of extensions: 305546
Number of successful extensions: 819
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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