Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20548
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   2.5  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   4.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.5  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   9.9  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +1

Query: 247 AVSRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQGYRRRLRP 381
           ++ R+  Q R   N++     P T R+   RR P  +    R  P
Sbjct: 198 SLPRQYSQSRGRHNQSRSKRQPKTGREDQTRRNPYYRPRTSRTEP 242


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 123 VIPHPRVPQLPPRHIHL 173
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 123 VIPHPRVPQLPPRHIHL 173
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 123 VIPHPRVPQLPPRHIHL 173
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 126 IPHPRVPQLPP 158
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 126 IPHPRVPQLPP 158
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 680 QFPRPENSRWPSPLPTSAARR 618
           Q    EN   P P PT  +RR
Sbjct: 243 QLKELENPPTPKPRPTKVSRR 263


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 602 STSHVPVSPPMSV 640
           S SHV + PP+SV
Sbjct: 285 SLSHVSLRPPLSV 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,093
Number of Sequences: 336
Number of extensions: 3360
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)