Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20546
(649 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 23 1.6
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 23 2.2
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 22 3.8
AY600516-1|AAT11864.1| 143|Tribolium castaneum optomotor-blind-... 22 3.8
AY600515-1|AAT11863.1| 134|Tribolium castaneum optomotor-blind-... 22 3.8
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 22 3.8
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 6.6
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 8.7
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 8.7
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 21 8.7
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 8.7
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +2
Query: 218 GRPDKQPCSSSDAKGHSCYRPRRDGERKRKSVRGCIV 328
GR D P S + SC ++ G R+ C+V
Sbjct: 154 GREDLSPSSLNGYSADSCDSKKKKGPTPRQQEELCLV 190
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = -1
Query: 532 HFLFLPWLEHAFDDITTYIIFFAKVEQLTDFGSTFG 425
H+ H F+ + Y ++ A + Q+++ +TFG
Sbjct: 499 HYYVNVTFPHLFNGLVDYSLWKALIFQISNLQTTFG 534
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 79 TTSNNFWHPVAGYETFNFMTAVNP 8
+TSNN WH G + N NP
Sbjct: 370 STSNNRWHNNNGNNSNNHWRKNNP 393
>AY600516-1|AAT11864.1| 143|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 143
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRI 101
M ++ P+TG Q + +VV HKL++
Sbjct: 54 MYIHPDSPSTGEQWMQKVVSFHKLKL 79
>AY600515-1|AAT11863.1| 134|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 134
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRI 101
M ++ P+TG Q + +VV HKL++
Sbjct: 54 MYIHPDSPSTGEQWMQKVVSFHKLKL 79
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -1
Query: 529 FLFLPWLEHAFDDITTYIIFFAKV 458
F+ LP+LEH + +I+F ++
Sbjct: 131 FINLPFLEHNLIRLKNCVIYFNRI 154
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 284 GAVCNMSGPLHQKTNTAVCQDALFH 210
G+ +MSG +HQ N + +L H
Sbjct: 196 GSWLDMSGGMHQMANYSTDYSSLTH 220
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 8.7
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -2
Query: 183 QRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 55
Q H H P IH P+L + +PP+ ++S I
Sbjct: 88 QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 8.7
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -2
Query: 183 QRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 55
Q H H P IH P+L + +PP+ ++S I
Sbjct: 88 QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 493 RQTRAPAKEGKENAKPRHKAPKI 561
R T + + EG+ +A+PR K+
Sbjct: 45 RSTSSQSTEGENDARPRASQVKL 67
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 8.7
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -2
Query: 183 QRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 55
Q H H P IH P+L + +PP+ ++S I
Sbjct: 88 QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,065
Number of Sequences: 336
Number of extensions: 3291
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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