Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20546
(649 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 157 2e-38
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 157 2e-38
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 157 2e-38
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 157 2e-38
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 157 2e-38
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 157 2e-38
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 157 2e-38
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 157 2e-38
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 148 7e-36
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 148 7e-36
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 60 3e-09
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 60 3e-09
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 60 3e-09
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 60 3e-09
AY051517-1|AAK92941.1| 731|Drosophila melanogaster GH16956p pro... 32 0.77
AE013599-2721|AAF57674.2| 731|Drosophila melanogaster CG30115-P... 32 0.77
AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-P... 32 0.77
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 1.8
AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p pro... 29 4.1
BT025110-1|ABE73281.1| 320|Drosophila melanogaster IP10506p pro... 29 5.4
BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p pro... 29 5.4
AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-P... 29 5.4
AE014298-1708|AAF48109.2| 320|Drosophila melanogaster CG10352-P... 29 5.4
BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p pro... 28 9.5
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 28 9.5
AY089644-1|AAL90382.1| 611|Drosophila melanogaster RE71924p pro... 28 9.5
AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p pro... 28 9.5
AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-P... 28 9.5
AE014296-1555|AAN11979.1| 611|Drosophila melanogaster CG5651-PB... 28 9.5
AE014296-1554|AAF50342.1| 611|Drosophila melanogaster CG5651-PA... 28 9.5
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 28 9.5
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 157 bits (380), Expect = 2e-38
Identities = 83/136 (61%), Positives = 99/136 (72%), Gaps = 11/136 (8%)
Frame = +2
Query: 182 WRQRQARIP---DETGRPDKQPCSSSDA------KGHSCYRPRRDGERKRKSVRGCIVDA 334
W+ Q RI D+ G P KQ + KGHSCYRPRR GERKRKSVRGCIVDA
Sbjct: 45 WKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDA 104
Query: 335 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQP 514
N+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R L
Sbjct: 105 NMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA 164
Query: 515 RKEKKMLN--PDIRHL 556
+ KK + P I+ L
Sbjct: 165 KDNKKATSKAPKIQRL 180
Score = 151 bits (366), Expect = 8e-37
Identities = 68/79 (86%), Positives = 74/79 (93%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKQGVLTNSRVRLLMQR 260
FPMKQGVLT+ RVRLL+++
Sbjct: 61 FPMKQGVLTHGRVRLLLKK 79
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 523 KENAKPRHKAPKIQRLVTPVVLQ 591
K+N K KAPKIQRL+TPVVLQ
Sbjct: 165 KDNKKATSKAPKIQRLITPVVLQ 187
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 157 bits (380), Expect = 2e-38
Identities = 83/136 (61%), Positives = 99/136 (72%), Gaps = 11/136 (8%)
Frame = +2
Query: 182 WRQRQARIP---DETGRPDKQPCSSSDA------KGHSCYRPRRDGERKRKSVRGCIVDA 334
W+ Q RI D+ G P KQ + KGHSCYRPRR GERKRKSVRGCIVDA
Sbjct: 45 WKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDA 104
Query: 335 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQP 514
N+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R L
Sbjct: 105 NMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA 164
Query: 515 RKEKKMLN--PDIRHL 556
+ KK + P I+ L
Sbjct: 165 KDNKKATSKAPKIQRL 180
Score = 151 bits (366), Expect = 8e-37
Identities = 68/79 (86%), Positives = 74/79 (93%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKQGVLTNSRVRLLMQR 260
FPMKQGVLT+ RVRLL+++
Sbjct: 61 FPMKQGVLTHGRVRLLLKK 79
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 523 KENAKPRHKAPKIQRLVTPVVLQ 591
K+N K KAPKIQRL+TPVVLQ
Sbjct: 165 KDNKKATSKAPKIQRLITPVVLQ 187
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 157 bits (380), Expect = 2e-38
Identities = 83/136 (61%), Positives = 99/136 (72%), Gaps = 11/136 (8%)
Frame = +2
Query: 182 WRQRQARIP---DETGRPDKQPCSSSDA------KGHSCYRPRRDGERKRKSVRGCIVDA 334
W+ Q RI D+ G P KQ + KGHSCYRPRR GERKRKSVRGCIVDA
Sbjct: 45 WKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDA 104
Query: 335 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQP 514
N+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R L
Sbjct: 105 NMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA 164
Query: 515 RKEKKMLN--PDIRHL 556
+ KK + P I+ L
Sbjct: 165 KDNKKATSKAPKIQRL 180
Score = 151 bits (366), Expect = 8e-37
Identities = 68/79 (86%), Positives = 74/79 (93%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKQGVLTNSRVRLLMQR 260
FPMKQGVLT+ RVRLL+++
Sbjct: 61 FPMKQGVLTHGRVRLLLKK 79
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 523 KENAKPRHKAPKIQRLVTPVVLQ 591
K+N K KAPKIQRL+TPVVLQ
Sbjct: 165 KDNKKATSKAPKIQRLITPVVLQ 187
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 157 bits (380), Expect = 2e-38
Identities = 83/136 (61%), Positives = 99/136 (72%), Gaps = 11/136 (8%)
Frame = +2
Query: 182 WRQRQARIP---DETGRPDKQPCSSSDA------KGHSCYRPRRDGERKRKSVRGCIVDA 334
W+ Q RI D+ G P KQ + KGHSCYRPRR GERKRKSVRGCIVDA
Sbjct: 45 WKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDA 104
Query: 335 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQP 514
N+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R L
Sbjct: 105 NMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA 164
Query: 515 RKEKKMLN--PDIRHL 556
+ KK + P I+ L
Sbjct: 165 KDNKKATSKAPKIQRL 180
Score = 151 bits (366), Expect = 8e-37
Identities = 68/79 (86%), Positives = 74/79 (93%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKQGVLTNSRVRLLMQR 260
FPMKQGVLT+ RVRLL+++
Sbjct: 61 FPMKQGVLTHGRVRLLLKK 79
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 523 KENAKPRHKAPKIQRLVTPVVLQ 591
K+N K KAPKIQRL+TPVVLQ
Sbjct: 165 KDNKKATSKAPKIQRLITPVVLQ 187
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 157 bits (380), Expect = 2e-38
Identities = 83/136 (61%), Positives = 99/136 (72%), Gaps = 11/136 (8%)
Frame = +2
Query: 182 WRQRQARIP---DETGRPDKQPCSSSDA------KGHSCYRPRRDGERKRKSVRGCIVDA 334
W+ Q RI D+ G P KQ + KGHSCYRPRR GERKRKSVRGCIVDA
Sbjct: 14 WKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDA 73
Query: 335 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQP 514
N+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R L
Sbjct: 74 NMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA 133
Query: 515 RKEKKMLN--PDIRHL 556
+ KK + P I+ L
Sbjct: 134 KDNKKATSKAPKIQRL 149
Score = 85.8 bits (203), Expect = 4e-17
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +3
Query: 117 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMQR 260
MG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+++
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKK 48
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 523 KENAKPRHKAPKIQRLVTPVVLQ 591
K+N K KAPKIQRL+TPVVLQ
Sbjct: 134 KDNKKATSKAPKIQRLITPVVLQ 156
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 157 bits (380), Expect = 2e-38
Identities = 83/136 (61%), Positives = 99/136 (72%), Gaps = 11/136 (8%)
Frame = +2
Query: 182 WRQRQARIP---DETGRPDKQPCSSSDA------KGHSCYRPRRDGERKRKSVRGCIVDA 334
W+ Q RI D+ G P KQ + KGHSCYRPRR GERKRKSVRGCIVDA
Sbjct: 14 WKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDA 73
Query: 335 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQP 514
N+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R L
Sbjct: 74 NMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA 133
Query: 515 RKEKKMLN--PDIRHL 556
+ KK + P I+ L
Sbjct: 134 KDNKKATSKAPKIQRL 149
Score = 85.8 bits (203), Expect = 4e-17
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +3
Query: 117 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMQR 260
MG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+++
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKK 48
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 523 KENAKPRHKAPKIQRLVTPVVLQ 591
K+N K KAPKIQRL+TPVVLQ
Sbjct: 134 KDNKKATSKAPKIQRLITPVVLQ 156
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 157 bits (380), Expect = 2e-38
Identities = 83/136 (61%), Positives = 99/136 (72%), Gaps = 11/136 (8%)
Frame = +2
Query: 182 WRQRQARIP---DETGRPDKQPCSSSDA------KGHSCYRPRRDGERKRKSVRGCIVDA 334
W+ Q RI D+ G P KQ + KGHSCYRPRR GERKRKSVRGCIVDA
Sbjct: 48 WKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDA 107
Query: 335 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQP 514
N+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R L
Sbjct: 108 NMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA 167
Query: 515 RKEKKMLN--PDIRHL 556
+ KK + P I+ L
Sbjct: 168 KDNKKATSKAPKIQRL 183
Score = 147 bits (356), Expect = 1e-35
Identities = 66/77 (85%), Positives = 72/77 (93%)
Frame = +3
Query: 30 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFP 209
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFP
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFP 65
Query: 210 MKQGVLTNSRVRLLMQR 260
MKQGVLT+ RVRLL+++
Sbjct: 66 MKQGVLTHGRVRLLLKK 82
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 523 KENAKPRHKAPKIQRLVTPVVLQ 591
K+N K KAPKIQRL+TPVVLQ
Sbjct: 168 KDNKKATSKAPKIQRLITPVVLQ 190
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 157 bits (380), Expect = 2e-38
Identities = 83/136 (61%), Positives = 99/136 (72%), Gaps = 11/136 (8%)
Frame = +2
Query: 182 WRQRQARIP---DETGRPDKQPCSSSDA------KGHSCYRPRRDGERKRKSVRGCIVDA 334
W+ Q RI D+ G P KQ + KGHSCYRPRR GERKRKSVRGCIVDA
Sbjct: 45 WKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDA 104
Query: 335 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQP 514
N+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R L
Sbjct: 105 NMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA 164
Query: 515 RKEKKMLN--PDIRHL 556
+ KK + P I+ L
Sbjct: 165 KDNKKATSKAPKIQRL 180
Score = 151 bits (366), Expect = 8e-37
Identities = 68/79 (86%), Positives = 74/79 (93%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKQGVLTNSRVRLLMQR 260
FPMKQGVLT+ RVRLL+++
Sbjct: 61 FPMKQGVLTHGRVRLLLKK 79
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 523 KENAKPRHKAPKIQRLVTPVVLQ 591
K+N K KAPKIQRL+TPVVLQ
Sbjct: 165 KDNKKATSKAPKIQRLITPVVLQ 187
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 148 bits (358), Expect = 7e-36
Identities = 67/76 (88%), Positives = 71/76 (93%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKQGVLTNSRVRLL 251
FPMKQGVLT+ R+RLL
Sbjct: 61 FPMKQGVLTHGRLRLL 76
Score = 60.9 bits (141), Expect = 1e-09
Identities = 48/127 (37%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
Frame = +2
Query: 182 WRQRQARIP---DETGRPDKQPCSSSDA-----KGHSCYRPRRDGERKRKSVRGCIVDAN 337
W+ Q RI D+ G P KQ + K HSC+ PR + RK K+VR V+AN
Sbjct: 45 WKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLLKKIHSCFHPRCNKVRKCKTVRKYTVEAN 104
Query: 338 LSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPR 517
+S L LV+++K P RLGP R+S I K++ L +EDD V+ LQ R
Sbjct: 105 VSALTLVVLKKNPS----------PCRLGPVRSSNISKIYYLCEEDD---EVIPVKLQRR 151
Query: 518 KEKKMLN 538
+KK N
Sbjct: 152 HQKKRQN 158
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 148 bits (358), Expect = 7e-36
Identities = 67/76 (88%), Positives = 71/76 (93%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 203
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKQGVLTNSRVRLL 251
FPMKQGVLT+ R+RLL
Sbjct: 61 FPMKQGVLTHGRLRLL 76
Score = 60.9 bits (141), Expect = 1e-09
Identities = 48/127 (37%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
Frame = +2
Query: 182 WRQRQARIP---DETGRPDKQPCSSSDA-----KGHSCYRPRRDGERKRKSVRGCIVDAN 337
W+ Q RI D+ G P KQ + K HSC+ PR + RK K+VR V+AN
Sbjct: 45 WKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLLKKIHSCFHPRCNKVRKCKTVRKYTVEAN 104
Query: 338 LSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPR 517
+S L LV+++K P RLGP R+S I K++ L +EDD V+ LQ R
Sbjct: 105 VSALTLVVLKKNPS----------PCRLGPVRSSNISKIYYLCEEDD---EVIPVKLQRR 151
Query: 518 KEKKMLN 538
+KK N
Sbjct: 152 HQKKRQN 158
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 59.7 bits (138), Expect = 3e-09
Identities = 39/94 (41%), Positives = 53/94 (56%)
Frame = +2
Query: 257 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 436
K HSC+ PR + RK K+VR V+AN+S L LV+++K P RLGP R+
Sbjct: 27 KIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRS 76
Query: 437 SKIRKLFNLSKEDDVRRYVVKRVLQPRKEKKMLN 538
S I K++ L +EDD V+ LQ R +KK N
Sbjct: 77 SNISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 107
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 59.7 bits (138), Expect = 3e-09
Identities = 39/94 (41%), Positives = 53/94 (56%)
Frame = +2
Query: 257 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 436
K HSC+ PR + RK K+VR V+AN+S L LV+++K P RLGP R+
Sbjct: 25 KIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRS 74
Query: 437 SKIRKLFNLSKEDDVRRYVVKRVLQPRKEKKMLN 538
S I K++ L +EDD V+ LQ R +KK N
Sbjct: 75 SNISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 105
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 59.7 bits (138), Expect = 3e-09
Identities = 39/94 (41%), Positives = 53/94 (56%)
Frame = +2
Query: 257 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 436
K HSC+ PR + RK K+VR V+AN+S L LV+++K P RLGP R+
Sbjct: 13 KIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRS 62
Query: 437 SKIRKLFNLSKEDDVRRYVVKRVLQPRKEKKMLN 538
S I K++ L +EDD V+ LQ R +KK N
Sbjct: 63 SNISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 93
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 59.7 bits (138), Expect = 3e-09
Identities = 39/94 (41%), Positives = 53/94 (56%)
Frame = +2
Query: 257 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 436
K HSC+ PR + RK K+VR V+AN+S L LV+++K P RLGP R+
Sbjct: 13 KIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRS 62
Query: 437 SKIRKLFNLSKEDDVRRYVVKRVLQPRKEKKMLN 538
S I K++ L +EDD V+ LQ R +KK N
Sbjct: 63 SNISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 93
>AY051517-1|AAK92941.1| 731|Drosophila melanogaster GH16956p
protein.
Length = 731
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 155 MEGLCTSCRWRQRQARIPDETGRPDKQPCS-SSDAK 259
++ L + R+R+R A + +ET P K+PC DAK
Sbjct: 126 LQKLAAAMRYRKRDAAVKEETKTPVKEPCKCDQDAK 161
>AE013599-2721|AAF57674.2| 731|Drosophila melanogaster CG30115-PC,
isoform C protein.
Length = 731
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 155 MEGLCTSCRWRQRQARIPDETGRPDKQPCS-SSDAK 259
++ L + R+R+R A + +ET P K+PC DAK
Sbjct: 126 LQKLAAAMRYRKRDAAVKEETKTPVKEPCKCDQDAK 161
>AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-PD,
isoform D protein.
Length = 1593
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 155 MEGLCTSCRWRQRQARIPDETGRPDKQPCS-SSDAK 259
++ L + R+R+R A + +ET P K+PC DAK
Sbjct: 988 LQKLAAAMRYRKRDAAVKEETKTPVKEPCKCDQDAK 1023
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 185 RQRQARIPDETGRPDKQPCSSSDAKGHSCYRPRRDGERKRKSVRGCIVD 331
++++++ G K PC + DA SC P +DG+ K+ C D
Sbjct: 67 KRKRSKSCSACGDNCKDPCLNMDACAESCENPCQDGKNGCKNPEDCAQD 115
>AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p
protein.
Length = 1240
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 155 MEGLCTSCRWRQRQARIPDETGRPDKQPCS-SSDAK 259
++ L + R+R+R A + +E P K+PC DAK
Sbjct: 632 LQKLAAAMRYRKRDAAVKEEMKTPVKEPCKCDQDAK 667
>BT025110-1|ABE73281.1| 320|Drosophila melanogaster IP10506p
protein.
Length = 320
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 396 VNPGISWAPLRTITRAKTERLASTIHPRTDLRFLS 292
V PG+ W PLR E LA H D+ F++
Sbjct: 33 VPPGVVWYPLRDFIPGSAEALAHLAHLGKDVTFVT 67
>BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p
protein.
Length = 638
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 278 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGP 427
P ER R + R I+ ++ A+V+V G +E DG RRL P
Sbjct: 271 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 321
>AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-PA
protein.
Length = 681
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 278 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGP 427
P ER R + R I+ ++ A+V+V G +E DG RRL P
Sbjct: 314 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 364
>AE014298-1708|AAF48109.2| 320|Drosophila melanogaster CG10352-PA
protein.
Length = 320
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 396 VNPGISWAPLRTITRAKTERLASTIHPRTDLRFLS 292
V PG+ W PLR E LA H D+ F++
Sbjct: 33 VPPGVVWYPLRDFIPGSAEALAHLAHLGKDVTFVT 67
>BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p
protein.
Length = 1455
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 33 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 161
N SY C K F D++ + K+ A+ +A QLG EW+
Sbjct: 260 NASYVCDTCGKGFLRKDKYIFHLRCHKKREAKWKALQLGKEWR 302
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 185 RQRQARIPDETGRPDKQPCSSSDAKGHSCYRPRRDGERKRKSVRGC 322
++++++ G K PC + DA SC P +DG K+ C
Sbjct: 67 KRKRSKSCSACGDNCKDPCLNMDACAESCENPCQDGVNGCKNPEDC 112
>AY089644-1|AAL90382.1| 611|Drosophila melanogaster RE71924p
protein.
Length = 611
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 371 GAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-VRRYVVKRVLQPRKEKKMLNPDI 547
G E+P L P+++ PK + +R L + D V + V++P K +++++ ++
Sbjct: 408 GEVELPMLNISYKPQKISPKFQNHVRHLLHDKIRDAYVHPQFIADVMKPMKIEEIMDQEV 467
Query: 548 RHL 556
++L
Sbjct: 468 QNL 470
>AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p
protein.
Length = 1454
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 33 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 161
N SY C K F D++ + K+ A+ +A QLG EW+
Sbjct: 259 NASYVCDTCGKGFLRKDKYIFHLRCHKKREAKWKALQLGKEWR 301
>AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-PA
protein.
Length = 1266
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 33 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 161
N SY C K F D++ + K+ A+ +A QLG EW+
Sbjct: 231 NASYVCDTCGKGFLRKDKYIFHLRCHKKREAKWKALQLGKEWR 273
>AE014296-1555|AAN11979.1| 611|Drosophila melanogaster CG5651-PB,
isoform B protein.
Length = 611
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 371 GAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-VRRYVVKRVLQPRKEKKMLNPDI 547
G E+P L P+++ PK + +R L + D V + V++P K +++++ ++
Sbjct: 408 GEVELPMLNISYKPQKISPKFQNHVRHLLHDKIRDAYVHPQFIADVMKPMKIEEIMDQEV 467
Query: 548 RHL 556
++L
Sbjct: 468 QNL 470
>AE014296-1554|AAF50342.1| 611|Drosophila melanogaster CG5651-PA,
isoform A protein.
Length = 611
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 371 GAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-VRRYVVKRVLQPRKEKKMLNPDI 547
G E+P L P+++ PK + +R L + D V + V++P K +++++ ++
Sbjct: 408 GEVELPMLNISYKPQKISPKFQNHVRHLLHDKIRDAYVHPQFIADVMKPMKIEEIMDQEV 467
Query: 548 RHL 556
++L
Sbjct: 468 QNL 470
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 28.3 bits (60), Expect = 9.5
Identities = 18/62 (29%), Positives = 22/62 (35%)
Frame = +1
Query: 355 CYCAQGCPGNSWID*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQTRAPAKEGKENA 534
C GCP + KC P TC N + + C A AK G + A
Sbjct: 3827 CLRDAGCPASQACRKLKCVDPCEFATCAPNSPCIVEDHKPICKFCPAGFIADAKNGCQKA 3886
Query: 535 KP 540
KP
Sbjct: 3887 KP 3888
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,120,221
Number of Sequences: 53049
Number of extensions: 646390
Number of successful extensions: 2162
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2156
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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