Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20545
         (539 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   151   1e-38
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   1.2  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   1.2  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   2.8  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   8.7  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   8.7  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  151 bits (367), Expect = 1e-38
 Identities = 73/95 (76%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
 Frame = +3

Query: 246 KEVSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 425
           K+ SGKHVVF+ +R+ILPKP    R  NKQKRPRS  +T+VYDAILEDLVFPAE+VGKRI
Sbjct: 83  KKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVYDAILEDLVFPAEVVGKRI 142

Query: 426 RVKLDGSQLIKVHLDKNQQTTIEHKVDT-SSLYTR 527
           RVKLDGSQLIKVHLDKNQQTTIEHKVDT +S+Y +
Sbjct: 143 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKK 177



 Score =  121 bits (292), Expect = 1e-29
 Identities = 56/80 (70%), Positives = 69/80 (86%)
 Frame = +1

Query: 13  TKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPM 192
           +K+IKA   E D+FET I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+
Sbjct: 5   SKVIKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPV 64

Query: 193 PKLKAFQKIQIRLVRELEKK 252
           PK KAFQK+Q RLVRELEKK
Sbjct: 65  PKQKAFQKVQTRLVRELEKK 84


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = +3

Query: 357 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTS 512
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    V+ S
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQS 83


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = +3

Query: 357 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTS 512
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    V+ S
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQS 83


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -2

Query: 439 SNLTLMRLPTISAGKTKSSRIASYTEVNVLERGLFCLLATRVLWLGLGRIL 287
           +N  L+ +P  +   T SSR       +     L CLLAT V+W   G++L
Sbjct: 54  ANSRLVTVPAPAKELTDSSRSGGLPSSSS-SSSLSCLLATIVMWC-TGQVL 102


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 146 KLNYTIRSRSSSMCR 190
           + N TIRSRSSS+ R
Sbjct: 271 RTNSTIRSRSSSLSR 285


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 377  SIVHRGQCP*AWPLLFVSNTSFV 309
            SIVHR +     PLL V+  +FV
Sbjct: 1012 SIVHRQEIEDMLPLLLVATCAFV 1034


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,491
Number of Sequences: 2352
Number of extensions: 10270
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)