Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20543
(453 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 171 2e-43
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 171 2e-43
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 171 3e-43
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 165 2e-41
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 126 6e-30
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 113 6e-26
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 5e-19
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 5e-19
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 1e-18
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 1e-18
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 89 1e-18
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 89 1e-18
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 89 1e-18
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 2e-18
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 89 2e-18
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 89 2e-18
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 89 2e-18
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 89 2e-18
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 3e-18
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 86 1e-17
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 2e-17
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 70 8e-13
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 67 7e-12
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 63 1e-10
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 62 3e-10
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 59 2e-09
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 57 8e-09
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 46 2e-05
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_14142| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 29 2.4
SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_37230| Best HMM Match : PAZ (HMM E-Value=0.035) 29 2.4
SB_7781| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_35813| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_44242| Best HMM Match : SATase_N (HMM E-Value=0.27) 27 7.3
SB_9194| Best HMM Match : SWIM (HMM E-Value=0.01) 27 7.3
SB_4060| Best HMM Match : zf-CCHC (HMM E-Value=3.6) 27 7.3
SB_16908| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_39707| Best HMM Match : PRE_C2HC (HMM E-Value=4.5) 27 9.6
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 171 bits (416), Expect = 2e-43
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSGMGTLLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA LS+HQLVENTDETY
Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETY 200
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
CIDNEALYDIC+RTLK+ PTYGD
Sbjct: 201 CIDNEALYDICFRTLKLTTPTYGD 224
Score = 134 bits (324), Expect = 3e-32
Identities = 63/73 (86%), Positives = 64/73 (87%)
Frame = +2
Query: 233 TEPNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRG 412
T P LNHLVS TMSGVTTCLRFPGQLNADLR +VNMVPFPRLHFFMPGFAPLTSRG
Sbjct: 218 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 277
Query: 413 SQQYRALTVPALT 451
SQQYRALTVP LT
Sbjct: 278 SQQYRALTVPELT 290
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 171 bits (416), Expect = 2e-43
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSGMGTLLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA LS+HQLVENTDETY
Sbjct: 354 GGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETY 413
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
CIDNEALYDIC+RTLK+ PTYGD
Sbjct: 414 CIDNEALYDICFRTLKLTTPTYGD 437
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +2
Query: 233 TEPNVRRLNHLVSLTMSGVTTCLRFPGQ 316
T P LNHLVS TMSGVTTCLRFPGQ
Sbjct: 431 TTPTYGDLNHLVSATMSGVTTCLRFPGQ 458
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 171 bits (415), Expect = 3e-43
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSGMGTLLISKIREEYPDRIMNT+S+VPSPKVSDTVVEPYNA LS+HQLVENTDETY
Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETY 200
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
CIDNEALYDIC+RTLK+ PTYGD
Sbjct: 201 CIDNEALYDICFRTLKLTTPTYGD 224
Score = 134 bits (324), Expect = 3e-32
Identities = 63/73 (86%), Positives = 64/73 (87%)
Frame = +2
Query: 233 TEPNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRG 412
T P LNHLVS TMSGVTTCLRFPGQLNADLR +VNMVPFPRLHFFMPGFAPLTSRG
Sbjct: 218 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 277
Query: 413 SQQYRALTVPALT 451
SQQYRALTVP LT
Sbjct: 278 SQQYRALTVPELT 290
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 165 bits (401), Expect = 2e-41
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSGM TLLI KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA LS+HQLVENTDETY
Sbjct: 86 GGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETY 145
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
CIDNEALYDIC+RTLK+ PTYGD
Sbjct: 146 CIDNEALYDICFRTLKLTTPTYGD 169
Score = 130 bits (314), Expect = 5e-31
Identities = 62/73 (84%), Positives = 63/73 (86%)
Frame = +2
Query: 233 TEPNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRG 412
T P LNHLVS TMSGVTTCLRFPGQLNADLR +VNMVPFPRL FFMPGFAPLTSRG
Sbjct: 163 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLPFFMPGFAPLTSRG 222
Query: 413 SQQYRALTVPALT 451
SQQYRALTVP LT
Sbjct: 223 SQQYRALTVPELT 235
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 126 bits (305), Expect = 6e-30
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG+G+LL+SKIREEYPDR+++++ V+PSP VS+TV EPYNA LS HQLV+ D
Sbjct: 49 GGTGSGLGSLLLSKIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDVADAAI 108
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
CIDNEALY+ICY LK PTY +
Sbjct: 109 CIDNEALYNICYNVLKRETPTYSE 132
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQ 316
P LN L++ TMSGVTT LRFPGQ
Sbjct: 128 PTYSELNSLIATTMSGVTTSLRFPGQ 153
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 113 bits (272), Expect = 6e-26
Identities = 51/66 (77%), Positives = 57/66 (86%)
Frame = +2
Query: 254 LNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 433
LNH++S TMSG+TTCLRFPGQLNADLR +VNM+P+PRLHFFMPGFAPLTSR YRAL
Sbjct: 130 LNHIISNTMSGLTTCLRFPGQLNADLRKLAVNMIPYPRLHFFMPGFAPLTSRECVSYRAL 189
Query: 434 TVPALT 451
TV LT
Sbjct: 190 TVADLT 195
Score = 111 bits (268), Expect = 2e-25
Identities = 57/108 (52%), Positives = 72/108 (66%), Gaps = 24/108 (22%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAV-------------- 140
GGTGSG+GTL++ ++EEYPDRI+++ SV PSP+VS+ VVEPYNA
Sbjct: 22 GGTGSGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQLLETTDEVS 81
Query: 141 ----------LSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGD 254
LS+HQL+E TDE +CIDNEALYDICY+TLK+ TY D
Sbjct: 82 EIVVEPYNAALSVHQLLETTDEVFCIDNEALYDICYKTLKLNTTTYSD 129
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 90.6 bits (215), Expect = 5e-19
Identities = 37/82 (45%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y R ++V P+P++S VVEPYN++L+ H +E++D +
Sbjct: 274 GGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAF 333
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 334 MVDNEAIYDICRRNLDIERPTY 355
Score = 59.7 bits (138), Expect = 1e-09
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S VT LRF G LN DL + N+VP+PR+HF + +AP+
Sbjct: 353 PTYTNLNRLIGQIVSSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVIGADKA 412
Query: 419 QYRALTVPALT 451
+ ++V +T
Sbjct: 413 YHENMSVAEIT 423
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 90.6 bits (215), Expect = 5e-19
Identities = 37/82 (45%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + ++V P+P++S VVEPYN++LS H +E++D +
Sbjct: 108 GGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTLEHSDCAF 167
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 168 MVDNEAIYDICRRNLDIERPTY 189
Score = 64.5 bits (150), Expect = 4e-11
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF M +AP+ S
Sbjct: 187 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPIISAEKA 246
Query: 419 QYRALTVPALT 451
+ +TV LT
Sbjct: 247 YHEMMTVSDLT 257
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 89.4 bits (212), Expect = 1e-18
Identities = 36/82 (43%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +++ P+P++S VVEPYN+VL+ H +E++D +
Sbjct: 143 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAF 202
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 203 MVDNEAIYDICRRNLDIERPTY 224
Score = 63.3 bits (147), Expect = 9e-11
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 222 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 281
Query: 419 QYRALTVPALT 451
+ LTV +T
Sbjct: 282 YHEQLTVAEIT 292
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 89.4 bits (212), Expect = 1e-18
Identities = 36/82 (43%), Positives = 56/82 (68%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG LL+ ++ +Y + +++ P+P++S VVEPYN+VL+ H +E++D +
Sbjct: 561 GGTGSGFSALLLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAF 620
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 621 MVDNEAIYDICRRNLDIERPTY 642
Score = 89.0 bits (211), Expect = 2e-18
Identities = 35/82 (42%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D +
Sbjct: 128 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAF 187
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 188 MVDNEAIYDICRRNLDIERPTY 209
Score = 63.3 bits (147), Expect = 9e-11
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 207 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 266
Query: 419 QYRALTVPALT 451
+ LTV +T
Sbjct: 267 YHEQLTVAEIT 277
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ + + LR+ LN DL + N+VP+PR+HF M +AP+ S
Sbjct: 640 PTYTNLNRLIDCVLHHCLSTLRWI--LNVDLMEFQTNLVPYPRIHFPMATYAPIISAEKA 697
Query: 419 QYRALTVPALT 451
+ +TV LT
Sbjct: 698 YHEMMTVSDLT 708
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 89.4 bits (212), Expect = 1e-18
Identities = 36/82 (43%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +++ P+P+VS VVEPYN++L+ H +E++D +
Sbjct: 143 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 202
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 203 MVDNEAIYDICRRNLDIERPTY 224
Score = 89.4 bits (212), Expect = 1e-18
Identities = 36/82 (43%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +++ P+P+VS VVEPYN++L+ H +E++D +
Sbjct: 576 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 635
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 636 MVDNEAIYDICRRNLDIERPTY 657
Score = 63.3 bits (147), Expect = 9e-11
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 655 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 714
Query: 419 QYRALTVPALT 451
+ LTV +T
Sbjct: 715 YHEQLTVAEIT 725
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 222 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 281
Query: 419 QYRALTVPALT 451
+ L+V +T
Sbjct: 282 YHEQLSVAEIT 292
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 89.4 bits (212), Expect = 1e-18
Identities = 36/82 (43%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +++ P+P+VS VVEPYN++L+ H +E++D +
Sbjct: 728 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 787
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 788 MVDNEAIYDICRRNLDIERPTY 809
Score = 89.0 bits (211), Expect = 2e-18
Identities = 35/82 (42%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D +
Sbjct: 207 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAF 266
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 267 MVDNEAIYDICRRNLDIERPTY 288
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 807 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 866
Query: 419 QYRALTVPALT 451
+ L+V +T
Sbjct: 867 YHEQLSVAEIT 877
Score = 60.9 bits (141), Expect = 5e-10
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 286 PTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 345
Query: 419 QYRALTVPALT 451
+ L+V +T
Sbjct: 346 YHEQLSVAEIT 356
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 89.4 bits (212), Expect = 1e-18
Identities = 36/82 (43%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + ++V P+P++S VVEPYN++L+ H +E++D +
Sbjct: 68 GGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAF 127
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 128 MVDNEAIYDICRRNLDIERPTY 149
Score = 63.3 bits (147), Expect = 9e-11
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 147 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 206
Query: 419 QYRALTVPALT 451
+ LTV +T
Sbjct: 207 YHEQLTVAEIT 217
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 89.0 bits (211), Expect = 2e-18
Identities = 35/82 (42%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D +
Sbjct: 80 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAF 139
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 140 MVDNEAIYDICRRNLDIERPTY 161
Score = 60.9 bits (141), Expect = 5e-10
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 159 PTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 218
Query: 419 QYRALTVPALT 451
+ L+V +T
Sbjct: 219 YHEQLSVAEIT 229
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 89.0 bits (211), Expect = 2e-18
Identities = 35/82 (42%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D +
Sbjct: 18 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAF 77
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 78 MVDNEAIYDICRRNLDIERPTY 99
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFP 364
P LN L+ +S +T LRF G LN DL + N+VP+P
Sbjct: 97 PTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 138
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 89.0 bits (211), Expect = 2e-18
Identities = 35/82 (42%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D +
Sbjct: 68 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAF 127
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 128 MVDNEAIYDICRRNLDIERPTY 149
Score = 60.9 bits (141), Expect = 5e-10
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 147 PTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 206
Query: 419 QYRALTVPALT 451
+ L+V +T
Sbjct: 207 YHEQLSVAEIT 217
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 89.0 bits (211), Expect = 2e-18
Identities = 35/82 (42%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D +
Sbjct: 143 GGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAF 202
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 203 MVDNEAIYDICRRNLDIDRPTY 224
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 222 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 281
Query: 419 QYRALTVPALT 451
+ L+V +T
Sbjct: 282 YHEQLSVAEIT 292
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 88.6 bits (210), Expect = 2e-18
Identities = 36/82 (43%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +++ P+P+VS VVEPYN++L+ H +E++D +
Sbjct: 142 GGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 201
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 202 MVDNEAIYDICRRNLDIERPTY 223
Score = 62.9 bits (146), Expect = 1e-10
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 221 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 280
Query: 419 QYRALTVPALT 451
+ LTV +T
Sbjct: 281 YHEQLTVADIT 291
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 88.2 bits (209), Expect = 3e-18
Identities = 35/82 (42%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D +
Sbjct: 947 GGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAF 1006
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 1007 MVDNEAIYDICRRNLDIERPTY 1028
Score = 87.8 bits (208), Expect = 4e-18
Identities = 35/82 (42%), Positives = 56/82 (68%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +++ P+P +S VVEPYN++L+ H +E++D +
Sbjct: 514 GGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNSILTTHTTLEHSDCAF 573
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 574 MVDNEAIYDICRRNLDIERPTY 595
Score = 66.9 bits (156), Expect = 7e-12
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+S +S +T LRF G LN DL + N+VP+PR+HF M +AP+ S
Sbjct: 593 PTYTNLNRLISQLVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMASYAPVVSAEKA 652
Query: 419 QYRALTVPALT 451
+ LTV +T
Sbjct: 653 YHEQLTVADIT 663
Score = 63.3 bits (147), Expect = 9e-11
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 1026 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 1085
Query: 419 QYRALTVPALT 451
+ LTV +T
Sbjct: 1086 YHEQLTVAEIT 1096
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 86.2 bits (204), Expect = 1e-17
Identities = 34/82 (41%), Positives = 56/82 (68%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + ++V P+P ++ VVEPYN++L+ H +E++D +
Sbjct: 133 GGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTLEHSDCAF 192
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + P+Y
Sbjct: 193 MVDNEAIYDICRRNLDIERPSY 214
Score = 64.9 bits (151), Expect = 3e-11
Identities = 29/71 (40%), Positives = 41/71 (57%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P+ LN L+ +S VT LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 212 PSYTNLNRLIGQIVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLATYAPVISAEKA 271
Query: 419 QYRALTVPALT 451
+ LTV +T
Sbjct: 272 YHEQLTVAEIT 282
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 85.4 bits (202), Expect = 2e-17
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +L+ + +Y + ++V P+P +S VVEPYN+VL+ H +E++D T+
Sbjct: 1054 GGTGSGFASLITEHLSVDYGKKSKLEFAVYPAPHISTAVVEPYNSVLTTHTTLEHSDCTF 1113
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
+DNEA+YD+C R L V P Y +
Sbjct: 1114 MVDNEAIYDLCRRNLDVERPGYAN 1137
Score = 62.9 bits (146), Expect = 1e-10
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T+ LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 1133 PGYANLNRLIGQIVSSITSSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISPEKA 1192
Query: 419 QYRALTVPALT 451
+ LTV +T
Sbjct: 1193 YHEQLTVAQIT 1203
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 70.1 bits (164), Expect = 8e-13
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = +3
Query: 6 GTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYC 185
GTGSG+GT +++ + ++YPD T +V PS D + PYN+VL++HQL E+ D
Sbjct: 156 GTGSGVGTYVLNLLHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLP 214
Query: 186 IDNEALYDIC 215
I+N+AL DIC
Sbjct: 215 IENQALVDIC 224
Score = 48.8 bits (111), Expect = 2e-06
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +2
Query: 224 SQGTEPNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPL 400
++G + +N++V+ + +T+ RF G LN DL ++N+VPFP+LH+ + PL
Sbjct: 264 TKGADKPFDAMNNIVANLILNMTSSARFEGSLNVDLNEITMNLVPFPKLHYLVSSQTPL 322
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 66.9 bits (156), Expect = 7e-12
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKV 107
GGTGSG+GTL++SKIREEYPDRI++ +SVVPSPKV
Sbjct: 97 GGTGSGLGTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 62.9 bits (146), Expect = 1e-10
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 20 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 79
Query: 419 QYRALTVPALT 451
+ LTV +T
Sbjct: 80 YHEQLTVADIT 90
Score = 35.9 bits (79), Expect = 0.016
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 186 IDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 2 VDNEAIYDICRRNLDIERPTY 22
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 20 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 79
Query: 419 QYRALTVPALT 451
+ L+V +T
Sbjct: 80 YHEQLSVAEIT 90
Score = 35.9 bits (79), Expect = 0.016
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 186 IDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 2 VDNEAIYDICRRNLDIERPTY 22
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 59.7 bits (138), Expect = 1e-09
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTS 406
P ++N LVS M+ TT LR+PG +N DL +++P PRLHF M G+ PLT+
Sbjct: 259 PTFSQVNQLVSTIMATSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTT 314
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +3
Query: 96 SPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTY 248
S +SD VV+PYN++L++ +L +N D +DN AL I L++PNPT+
Sbjct: 211 SEDISDVVVQPYNSILTLKRLTQNADCVVVLDNTALNRIAADRLRIPNPTF 261
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +2
Query: 350 MVPFPRLHFFMPGFAPLTSRGSQQYRALTVPALT 451
MVPFPRLHFFMPGFAPL SR +QQY+ ++V LT
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELT 34
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 56.8 bits (131), Expect = 8e-09
Identities = 26/84 (30%), Positives = 50/84 (59%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG+G + + +R+ YP+ + V P + + +V+ YNA L++ QL +++D
Sbjct: 149 GGTGSGVGAFVTNSLRDFYPNSFIVNNVVWPY-SMGEVIVQNYNATLTLAQLYKSSDAII 207
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
++N+ L IC + L + + ++ D
Sbjct: 208 IVENDKLQKICSKLLNLKHISFRD 231
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNAVLSIHQLVENTDET 179
GGTGSG+G L+ + + YP + + SV SP VS ++ ++ YN++LS+ L N D
Sbjct: 125 GGTGSGLGARLVETLSDAYP--LAHVMSVAVSPHVSGESPLQHYNSLLSLAALQRNADGI 182
Query: 180 YCIDN-EALYDICYRTLKV 233
N + L + + +K+
Sbjct: 183 LLFHNDDVLRQVMLQRVKI 201
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 43.6 bits (98), Expect = 8e-05
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3
Query: 45 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 197
+ ++YPD T +V PS D + PYN+VL++HQL E+ D I+N+
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQ 70
>SB_14142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 50 RRVPRQNHEHILSSPLAQSIRHCRRTIQRSSLHPSTSREYRRNLLHRQRGPLRYLLQDSQ 229
R + ++N +H ++++H I + +L +RNL HRQR + LQ +
Sbjct: 216 RLISKRNLQHRERLIRKRNLQHREMLISKRNLQHREGLISKRNLQHRQRLISKRNLQHRE 275
Query: 230 G--TEPNVRRLNHLVSLTMSGVTTCLR 304
G ++ N+ L+++T S ++ R
Sbjct: 276 GMISKRNLLHREGLITITQSDLSVANR 302
>SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 41 KDPRRVPRQNHEHILSSPLAQSIR 112
+D RV R+N HI+S+PL Q IR
Sbjct: 245 EDRGRVYRRNRRHIISTPLDQPIR 268
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 29.1 bits (62), Expect = 1.8
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 36 ISKIREEYPDRIMNTYSVVPSPKVS 110
+ K++E+YPD I++++ + P K S
Sbjct: 484 LKKLQEQYPDHILSSFELFPCEKAS 508
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 44 DPRRVPRQNHEHILSSPLAQSIR 112
D RV R+N HI+S+PL Q IR
Sbjct: 968 DRGRVYRRNRRHIISTPLDQPIR 990
>SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 44 DPRRVPRQNHEHILSSPLAQSIR 112
D RV R+N HI+S+PL Q IR
Sbjct: 75 DRGRVYRRNRRHIISTPLDQPIR 97
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 44 DPRRVPRQNHEHILSSPLAQSIR 112
D RV R+N HI+S+PL Q IR
Sbjct: 968 DRGRVYRRNRRHIISTPLDQPIR 990
>SB_37230| Best HMM Match : PAZ (HMM E-Value=0.035)
Length = 167
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -1
Query: 453 CVSAGTVSARYCWLPRDVSGAKPGMKKCRRGKGTMLTDQLRRSAFSCPGNRRHV 292
C+ G R+ +LP +V PG + ++ T + +R +A S P R +
Sbjct: 7 CLQVGQ-EQRHTYLPLEVCNIVPGQRCVKKLTDTQTSKMIRATARSAPDREREI 59
>SB_7781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 94 PRPKYQTLSSNHTTQFSPSIN*SRIQTKLTA*TTRPFTISATGLSRYRTQ 243
P P Y +SNH T++ S + + T P+++ A S +RT+
Sbjct: 335 PYPLYTLYASNHRTRYMHSTRPTTVPVIYTLLVQPPYSLYALYASNHRTR 384
>SB_35813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 44 DPRRVPRQNHEHILSSPLAQSIR 112
D RV R+N HI+S+PL Q I+
Sbjct: 527 DRERVYRRNRRHIISTPLDQPIQ 549
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 30 LLISKIREEYPDRI-MNTYSVVPS-PKVSDTVVEPYNAVLSIHQLVE 164
+ +SKI EY + + + + V+P PK+ D + +P+ L + QL+E
Sbjct: 22 ICVSKIILEYKEPMAICSQRVLPDWPKIGDRITQPFLDQLMVSQLLE 68
>SB_44242| Best HMM Match : SATase_N (HMM E-Value=0.27)
Length = 426
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -2
Query: 344 PTSCAGRRSAVRG----TAGTSSRRTWSATPGGSVAVRWVRYLESPVADIVKGLVVY 186
PT C + ++G T TSSR T T SVA R V Y ++ ++ + VY
Sbjct: 342 PTQCTHLKHVMQGVVTQTESTSSRGTPRLTRSSSVARRKVTYWIGSDSNRMRSIYVY 398
>SB_9194| Best HMM Match : SWIM (HMM E-Value=0.01)
Length = 701
Score = 27.1 bits (57), Expect = 7.3
Identities = 27/90 (30%), Positives = 34/90 (37%), Gaps = 6/90 (6%)
Frame = +1
Query: 103 KYQTLSSNHTTQFSPSIN*SRIQTKLTA*TTRPFTISATGLSRYRTQRTA------TEPP 264
KYQ L FS + I LT T+ T + G YR A P
Sbjct: 346 KYQYLGGYRNCSFSEMLT-VVITRFLTDSYTKYITRNVRGSYGYRVYNDAILNFLRNRPS 404
Query: 265 GVADHVRRDDVPAVPRTAERRPAQLVGQHG 354
V DHV + A +A + + VGQHG
Sbjct: 405 SVVDHVHQRLGTASDESAILKIEECVGQHG 434
>SB_4060| Best HMM Match : zf-CCHC (HMM E-Value=3.6)
Length = 395
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 357 GTMLTDQLRRSAFSCPGNRRHVVTPDMVSDTR 262
G + TD+ RR + PG++ H D+V +TR
Sbjct: 265 GQIPTDENRRKQWLKPGSKAHEALKDVVFNTR 296
>SB_16908| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 323 RSAVRGTAGTSSRRTWSATPGGSVAVRWVRYLESPVADI 207
R+ G A T S W+A GG+ V W VAD+
Sbjct: 8 RAVANGGAATGS---WTAANGGAATVGWTAANGGAVADV 43
>SB_39707| Best HMM Match : PRE_C2HC (HMM E-Value=4.5)
Length = 405
Score = 26.6 bits (56), Expect = 9.6
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +2
Query: 53 RVPRQNHEHILSSPLAQSIRHCRRTIQRSSLHPSTSREYRRNLLHRQRGPLRY 211
R+P E + + +++ CR ++R H +YR LH L Y
Sbjct: 292 RLPPNRTELDILGDVTKNMDRCRHLVRRRVYHQPCGYKYREVHLHNASADLSY 344
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,070,960
Number of Sequences: 59808
Number of extensions: 298855
Number of successful extensions: 1183
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 908427626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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