Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20543
(453 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 171 2e-43
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 170 5e-43
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 168 1e-42
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 167 2e-42
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 167 2e-42
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 166 6e-42
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 123 5e-29
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 123 5e-29
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 93 9e-20
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 89 1e-18
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 89 1e-18
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 89 1e-18
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 89 1e-18
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 89 1e-18
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 89 2e-18
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 89 2e-18
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 89 2e-18
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 89 2e-18
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 89 2e-18
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 89 2e-18
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 87 6e-18
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 86 1e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 86 1e-17
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 81 5e-16
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 81 5e-16
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 77 5e-15
Z81050-2|CAB02852.1| 526|Caenorhabditis elegans Hypothetical pr... 31 0.39
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 31 0.52
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 31 0.52
AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ... 30 0.91
AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage... 30 0.91
Z54238-4|CAA90996.2| 307|Caenorhabditis elegans Hypothetical pr... 29 1.6
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 171 bits (417), Expect = 2e-43
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSGMGTLLISKIREEYPDRIM+++SVVPSPKVSDTVVEPYNA LS+HQLVENTDETY
Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETY 200
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
CIDNEALYDICYRTLK+ NPTYGD
Sbjct: 201 CIDNEALYDICYRTLKLTNPTYGD 224
Score = 126 bits (303), Expect = 1e-29
Identities = 58/73 (79%), Positives = 63/73 (86%)
Frame = +2
Query: 233 TEPNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRG 412
T P LNHLVSLTMSGVTTCLRFPGQLNADLR +VNMVPFPRLHFFMPGFAPL+++G
Sbjct: 218 TNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKG 277
Query: 413 SQQYRALTVPALT 451
+Q YRALTV LT
Sbjct: 278 TQAYRALTVAELT 290
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 170 bits (413), Expect = 5e-43
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSGMGTLLISKIREE+PDRIM+++SVVPSPKVSDTVVEPYNA LS+HQLVENTDETY
Sbjct: 141 GGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETY 200
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
CIDNEALYDICYRTLK+ NPTYGD
Sbjct: 201 CIDNEALYDICYRTLKLTNPTYGD 224
Score = 126 bits (303), Expect = 1e-29
Identities = 58/73 (79%), Positives = 63/73 (86%)
Frame = +2
Query: 233 TEPNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRG 412
T P LNHLVSLTMSGVTTCLRFPGQLNADLR +VNMVPFPRLHFFMPGFAPL+++G
Sbjct: 218 TNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKG 277
Query: 413 SQQYRALTVPALT 451
+Q YRALTV LT
Sbjct: 278 AQAYRALTVAELT 290
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 168 bits (409), Expect = 1e-42
Identities = 75/84 (89%), Positives = 82/84 (97%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSGMGTLLISKIREEYPDRIM+++SVVPSPKVSDTVVEPYNA LS+HQLVENTDET+
Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETF 200
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
CIDNEALYDIC+RTLK+ NPTYGD
Sbjct: 201 CIDNEALYDICFRTLKLSNPTYGD 224
Score = 123 bits (296), Expect = 7e-29
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = +2
Query: 233 TEPNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRG 412
+ P LNHLVS+TMSGVTTCLRFPGQLNADLR +VNMVPFPRLHFFMPGFAPL+++G
Sbjct: 218 SNPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKG 277
Query: 413 SQQYRALTVPALT 451
+Q YRALTV LT
Sbjct: 278 AQAYRALTVAELT 290
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 167 bits (407), Expect = 2e-42
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSGMGTLLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA LS+HQLVENTD T+
Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTF 200
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
CIDNEALYDIC+RTLK+ PTYGD
Sbjct: 201 CIDNEALYDICFRTLKLTTPTYGD 224
Score = 130 bits (313), Expect = 6e-31
Identities = 60/73 (82%), Positives = 63/73 (86%)
Frame = +2
Query: 233 TEPNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRG 412
T P LNHLVS TMSGVTTCLRFPGQLNADLR +VNMVPFPRLHFFMPGFAPLTSR
Sbjct: 218 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRS 277
Query: 413 SQQYRALTVPALT 451
+QQYRA+TVP LT
Sbjct: 278 NQQYRAITVPELT 290
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 167 bits (407), Expect = 2e-42
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSGMGTLLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA LS+HQLVENTD T+
Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTF 200
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
CIDNEALYDIC+RTLK+ PTYGD
Sbjct: 201 CIDNEALYDICFRTLKLTTPTYGD 224
Score = 130 bits (313), Expect = 6e-31
Identities = 60/73 (82%), Positives = 63/73 (86%)
Frame = +2
Query: 233 TEPNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRG 412
T P LNHLVS TMSGVTTCLRFPGQLNADLR +VNMVPFPRLHFFMPGFAPLTSR
Sbjct: 218 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRS 277
Query: 413 SQQYRALTVPALT 451
+QQYRA+TVP LT
Sbjct: 278 NQQYRAITVPELT 290
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 166 bits (404), Expect = 6e-42
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSGMGTLLISKIREEYPDRIM T+SVVPSPKVSDTVVEPYNA LS+HQLVENTDET+
Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETF 200
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
CIDNEALYDIC+RTLK+ PTYGD
Sbjct: 201 CIDNEALYDICFRTLKLTTPTYGD 224
Score = 134 bits (324), Expect = 3e-32
Identities = 62/73 (84%), Positives = 65/73 (89%)
Frame = +2
Query: 233 TEPNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRG 412
T P LNHLVS+TMSGVTTCLRFPGQLNADLR +VNMVPFPRLHFFMPGFAPLTSRG
Sbjct: 218 TTPTYGDLNHLVSMTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 277
Query: 413 SQQYRALTVPALT 451
SQQYR+LTVP LT
Sbjct: 278 SQQYRSLTVPELT 290
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 123 bits (297), Expect = 5e-29
Identities = 55/85 (64%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG+G+LLISK+REEY D+ ++T S++PS KVSDTVVEPYNA+LS+ L++N DE +
Sbjct: 141 GGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENF 200
Query: 183 CIDNEALYDICYRTLKVPN-PTYGD 254
CIDNEA++DIC LK+ N TYGD
Sbjct: 201 CIDNEAIFDICQYNLKLENRVTYGD 225
Score = 62.5 bits (145), Expect = 1e-10
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +2
Query: 254 LNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 433
LNHL SL +SG+TT RF G L D+R +N PRLHFFM FAP+ +G +A
Sbjct: 226 LNHLASLALSGITTFQRFKGNLKTDIR--KLNTAGSPRLHFFMTSFAPVYGKGIIDCQAF 283
Query: 434 TVPALT 451
++ LT
Sbjct: 284 SISDLT 289
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 123 bits (297), Expect = 5e-29
Identities = 55/85 (64%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG+G+LLISK+REEY D+ ++T S++PS KVSDTVVEPYNA+LS+ L++N DE +
Sbjct: 141 GGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENF 200
Query: 183 CIDNEALYDICYRTLKVPN-PTYGD 254
CIDNEA++DIC LK+ N TYGD
Sbjct: 201 CIDNEAIFDICQYNLKLENRVTYGD 225
Score = 62.5 bits (145), Expect = 1e-10
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +2
Query: 254 LNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 433
LNHL SL +SG+TT RF G L D+R +N PRLHFFM FAP+ +G +A
Sbjct: 226 LNHLASLALSGITTFQRFKGNLKTDIR--KLNTAGSPRLHFFMTSFAPVYGKGIIDCQAF 283
Query: 434 TVPALT 451
++ LT
Sbjct: 284 SISDLT 289
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 93.1 bits (221), Expect = 9e-20
Identities = 37/84 (44%), Positives = 61/84 (72%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG ++L+ ++ EY + +S+ P+P++S +VVEPYN++L+ H +E++D ++
Sbjct: 140 GGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSF 199
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
+DNEA+YDIC R L+V PTY +
Sbjct: 200 MVDNEAIYDICRRNLRVSRPTYNN 223
Score = 60.9 bits (141), Expect = 4e-10
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +2
Query: 233 TEPNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRG 412
+ P LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 217 SRPTYNNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLIS-- 274
Query: 413 SQQYRALTVPALT 451
S + L+V +T
Sbjct: 275 SAHHEFLSVDEIT 287
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 89.0 bits (211), Expect = 1e-18
Identities = 37/82 (45%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D +
Sbjct: 141 GGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 200
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L V P+Y
Sbjct: 201 MVDNEAIYDICRRNLSVDRPSY 222
Score = 65.7 bits (153), Expect = 1e-11
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P+ LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKA 279
Query: 419 QYRALTVPALT 451
+ AL+V +T
Sbjct: 280 YHEALSVNDIT 290
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 89.0 bits (211), Expect = 1e-18
Identities = 36/82 (43%), Positives = 58/82 (70%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D ++
Sbjct: 143 GGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSF 202
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + P+Y
Sbjct: 203 MVDNEAIYDICRRNLDIERPSY 224
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P+ LN L+ +S +T LRF G LN DL + N+VP+PR+HF + F+P+ S
Sbjct: 222 PSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKA 281
Query: 419 QYRALTVPALT 451
+ L+V +T
Sbjct: 282 YHEQLSVAEIT 292
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 89.0 bits (211), Expect = 1e-18
Identities = 36/82 (43%), Positives = 58/82 (70%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D ++
Sbjct: 142 GGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSF 201
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + P+Y
Sbjct: 202 MVDNEAIYDICRRNLDIERPSY 223
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P+ LN L+ +S +T LRF G LN DL + N+VP+PR+HF + F+P+ S
Sbjct: 221 PSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKA 280
Query: 419 QYRALTVPALT 451
+ L+V +T
Sbjct: 281 YHEQLSVAEIT 291
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 89.0 bits (211), Expect = 1e-18
Identities = 36/82 (43%), Positives = 58/82 (70%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D ++
Sbjct: 143 GGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSF 202
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + P+Y
Sbjct: 203 MVDNEAIYDICRRNLDIERPSY 224
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P+ LN L+ +S +T LRF G LN DL + N+VP+PR+HF + F+P+ S
Sbjct: 222 PSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKA 281
Query: 419 QYRALTVPALT 451
+ L+V +T
Sbjct: 282 YHEQLSVAEIT 292
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 89.0 bits (211), Expect = 1e-18
Identities = 36/82 (43%), Positives = 58/82 (70%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D ++
Sbjct: 143 GGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSF 202
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + P+Y
Sbjct: 203 MVDNEAIYDICRRNLDIERPSY 224
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P+ LN L+ +S +T LRF G LN DL + N+VP+PR+HF + F+P+ S
Sbjct: 222 PSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKA 281
Query: 419 QYRALTVPALT 451
+ L+V +T
Sbjct: 282 YHEQLSVAEIT 292
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 88.6 bits (210), Expect = 2e-18
Identities = 37/82 (45%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D +
Sbjct: 141 GGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 200
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L V P+Y
Sbjct: 201 MVDNEAIYDICRRNLDVERPSY 222
Score = 65.7 bits (153), Expect = 1e-11
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P+ LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKA 279
Query: 419 QYRALTVPALT 451
+ AL+V +T
Sbjct: 280 YHEALSVSDIT 290
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 88.6 bits (210), Expect = 2e-18
Identities = 37/82 (45%), Positives = 58/82 (70%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ EY + +++ P+P+VS ++VEPYN++L H +E++D T+
Sbjct: 149 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTF 208
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 209 MVDNEAIYDICRRNLDLARPTY 230
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN LV+ +S +T LRF G LN DL + N+VP+PR+HF + +APL S
Sbjct: 228 PTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERA 287
Query: 419 QYRALTVPALT 451
+ TV +T
Sbjct: 288 SHEQNTVSDMT 298
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 88.6 bits (210), Expect = 2e-18
Identities = 37/82 (45%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D +
Sbjct: 141 GGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 200
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L V P+Y
Sbjct: 201 MVDNEAIYDICKRNLDVDRPSY 222
Score = 65.3 bits (152), Expect = 2e-11
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P+ LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKA 279
Query: 419 QYRALTVPALT 451
+ AL+V +T
Sbjct: 280 YHEALSVNDIT 290
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 88.6 bits (210), Expect = 2e-18
Identities = 37/82 (45%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D +
Sbjct: 141 GGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 200
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L V P+Y
Sbjct: 201 MVDNEAIYDICRRNLDVERPSY 222
Score = 65.7 bits (153), Expect = 1e-11
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P+ LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKA 279
Query: 419 QYRALTVPALT 451
+ AL+V +T
Sbjct: 280 YHEALSVSDIT 290
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 88.6 bits (210), Expect = 2e-18
Identities = 37/82 (45%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D +
Sbjct: 141 GGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 200
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L V P+Y
Sbjct: 201 MVDNEAIYDICKRNLDVDRPSY 222
Score = 65.3 bits (152), Expect = 2e-11
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P+ LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKA 279
Query: 419 QYRALTVPALT 451
+ AL+V +T
Sbjct: 280 YHEALSVNDIT 290
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 88.6 bits (210), Expect = 2e-18
Identities = 37/82 (45%), Positives = 58/82 (70%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ EY + +++ P+P+VS ++VEPYN++L H +E++D T+
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTF 180
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 181 MVDNEAIYDICRRNLDLARPTY 202
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN LV+ +S +T LRF G LN DL + N+VP+PR+HF + +APL S
Sbjct: 200 PTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERA 259
Query: 419 QYRALTVPALT 451
+ TV +T
Sbjct: 260 SHEQNTVSDMT 270
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 87.0 bits (206), Expect = 6e-18
Identities = 36/82 (43%), Positives = 56/82 (68%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ +Y + +S+ P+P+V VVEPYN++L+ H +E++D +
Sbjct: 141 GGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAF 200
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L V P+Y
Sbjct: 201 MVDNEAIYDICRRNLSVDRPSY 222
Score = 65.7 bits (153), Expect = 1e-11
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P+ LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKA 279
Query: 419 QYRALTVPALT 451
+ AL+V +T
Sbjct: 280 YHEALSVNDIT 290
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 86.2 bits (204), Expect = 1e-17
Identities = 36/84 (42%), Positives = 59/84 (70%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +LL+ ++ E+ + +SV P+P+VS +VVEPYN++L+ H +E +D ++
Sbjct: 146 GGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSF 205
Query: 183 CIDNEALYDICYRTLKVPNPTYGD 254
+DNEA+YD+C + L V P+Y +
Sbjct: 206 MVDNEAIYDLCRQKLHVERPSYSN 229
Score = 63.3 bits (147), Expect = 8e-11
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P+ LN L++ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 225 PSYSNLNRLIAQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRA 284
Query: 419 QYRALTVPALT 451
+ L+V +T
Sbjct: 285 HHEPLSVQDIT 295
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 86.2 bits (204), Expect = 1e-17
Identities = 35/82 (42%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG LL+ ++ +Y + + + P+P+VS ++VEPYN++L+ H +E++D ++
Sbjct: 148 GGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSF 207
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+YDIC R L + PTY
Sbjct: 208 MVDNEAIYDICRRNLDLARPTY 229
Score = 64.1 bits (149), Expect = 5e-11
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L++ +S VT LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 227 PTYTNLNRLIAQVISSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKA 286
Query: 419 QYRALTVPALT 451
+ +TV +T
Sbjct: 287 YHEQMTVAEIT 297
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 80.6 bits (190), Expect = 5e-16
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNAVLSIHQLVENTDET 179
GGTGSG G+LL+ ++RE +P +++ TYSV + S D VV PYN VLS+ +L+EN D
Sbjct: 145 GGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHV 204
Query: 180 YCIDNEALYDICYRTLKVPNPTY 248
+DN AL+ + K PT+
Sbjct: 205 VVLDNAALHRLAAGKFKTDTPTF 227
Score = 32.7 bits (71), Expect = 0.13
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P +N LV+ MS T RF + +R +++ PFP +HF +P+
Sbjct: 225 PTFDHINSLVARIMSTSTAPYRFNSAMCPSIRY--LDLAPFPPMHFIQSAISPVVDPNEN 282
Query: 419 QYRALTVPALT 451
R +V +T
Sbjct: 283 FTRKTSVADVT 293
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 80.6 bits (190), Expect = 5e-16
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNAVLSIHQLVENTDET 179
GGTGSG G+LL+ ++RE +P +++ TYSV + S D VV PYN VLS+ +L+EN D
Sbjct: 145 GGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHV 204
Query: 180 YCIDNEALYDICYRTLKVPNPTY 248
+DN AL+ + K PT+
Sbjct: 205 VVLDNAALHRLAAGKFKTDTPTF 227
Score = 32.7 bits (71), Expect = 0.13
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P +N LV+ MS T RF + +R +++ PFP +HF +P+
Sbjct: 225 PTFDHINSLVARIMSTSTAPYRFNSAMCPSIRY--LDLAPFPPMHFIQSAISPVVDPNEN 282
Query: 419 QYRALTVPALT 451
R +V +T
Sbjct: 283 FTRKTSVADVT 293
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 77.4 bits (182), Expect = 5e-15
Identities = 32/82 (39%), Positives = 58/82 (70%)
Frame = +3
Query: 3 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 182
GGTGSG +L++ ++ +Y + +S+ P+P++S ++VEPYN++L+ H +E++D ++
Sbjct: 143 GGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSF 202
Query: 183 CIDNEALYDICYRTLKVPNPTY 248
+DNEA+Y+I L V +PTY
Sbjct: 203 IMDNEAIYEITKVNLGVRSPTY 224
Score = 61.7 bits (143), Expect = 2e-10
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +2
Query: 239 PNVRRLNHLVSLTMSGVTTCLRFPGQLNADLRNWSVNMVPFPRLHFFMPGFAPLTSRGSQ 418
P LN L++ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 222 PTYTHLNRLLAQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKA 281
Query: 419 QYRALTVPALT 451
+ L+V +T
Sbjct: 282 YHEQLSVSEIT 292
>Z81050-2|CAB02852.1| 526|Caenorhabditis elegans Hypothetical
protein C50B6.3 protein.
Length = 526
Score = 31.1 bits (67), Expect = 0.39
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +3
Query: 21 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA 200
M + L+ K REE R S +V + V E Y+ + I++L N ++
Sbjct: 412 MQSELLKKFREEVQRRYAEGSSASDQERVRNMVYEAYDNIYHINRLSANEGPRILTSDQK 471
Query: 201 LYDICYRTLKVPNPTYGD*T 260
L Y+T PT+ + T
Sbjct: 472 LVMQQYKTTFRQGPTFAEET 491
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 30.7 bits (66), Expect = 0.52
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +1
Query: 55 STPTES*THTQ*SPRPKYQTLSSNHTTQFSPSIN*SRIQTKLTA*TT-RPFTISATGLSR 231
+TPT + T T +P+P T +S TT + T TA TT +P T + +
Sbjct: 606 TTPTSTTTTTTTTPKPTTSTSTSTSTT--------TTTTTSTTATTTPQPTTTTTSEKPV 657
Query: 232 YRTQRTATEPPGVADHVRRDDVPAVPRTAERRP 330
T +T T PP V+R VP T + P
Sbjct: 658 TLTTQTWTAPPTTT--VKRTTPQTVPTTTPKIP 688
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 30.7 bits (66), Expect = 0.52
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +1
Query: 55 STPTES*THTQ*SPRPKYQTLSSNHTTQFSPSIN*SRIQTKLTA*TT-RPFTISATGLSR 231
+TPT + T T +P+P T +S TT + T TA TT +P T + +
Sbjct: 606 TTPTSTTTTTTTTPKPTTSTSTSTSTT--------TTTTTSTTATTTPQPTTTTTSEKPV 657
Query: 232 YRTQRTATEPPGVADHVRRDDVPAVPRTAERRP 330
T +T T PP V+R VP T + P
Sbjct: 658 TLTTQTWTAPPTTT--VKRTTPQTVPTTTPKIP 688
>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
protein Y39A1B.3 protein.
Length = 1499
Score = 29.9 bits (64), Expect = 0.91
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 199 PFTISATG--LSRYRTQRTATEPPGVADH--VRRDDVPAVPRTAERRPAQ 336
P T+S + SR R PP +D DD PA PR+A RR A+
Sbjct: 1432 PTTMSGSSRTTSRAANSRRRAPPPAQSDEDDSDSDDAPAAPRSAARRKAK 1481
>AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage
compensation protein protein.
Length = 1455
Score = 29.9 bits (64), Expect = 0.91
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 199 PFTISATG--LSRYRTQRTATEPPGVADH--VRRDDVPAVPRTAERRPAQ 336
P T+S + SR R PP +D DD PA PR+A RR A+
Sbjct: 1388 PTTMSGSSRTTSRAANSRRRAPPPAQSDEDDSDSDDAPAAPRSAARRKAK 1437
>Z54238-4|CAA90996.2| 307|Caenorhabditis elegans Hypothetical
protein T28C6.5 protein.
Length = 307
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 149 PSTSREYRRNLLHRQRGPLRYLLQDSQGTEPNVRRLNHLVSLTMSGVT 292
PS S+ +R + +G + LLQ + E NV+ + S+TM GVT
Sbjct: 27 PSLSKNFRGRQI--SKGFVPSLLQSNNAFEINVKDIKITTSVTMEGVT 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,874,897
Number of Sequences: 27780
Number of extensions: 212440
Number of successful extensions: 791
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -