Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20542
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   2.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   2.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   2.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   2.7  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   3.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   6.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   6.2  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 299 PLVDLRNPGPPQHQEHETQNPEHHED 376
           P ++ +N   P  + HE     HHE+
Sbjct: 96  PPINHQNYNEPYQRTHENMLLRHHEE 121


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 299 PLVDLRNPGPPQHQEHETQNPEHHED 376
           P ++ +N   P  + HE     HHE+
Sbjct: 96  PPINHQNYNEPYQRTHENMLLRHHEE 121


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 299 PLVDLRNPGPPQHQEHETQNPEHHED 376
           P ++ +N   P  + HE     HHE+
Sbjct: 96  PPINHQNYNEPYQRTHENMLLRHHEE 121


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 335 HQEHETQNPEHHE 373
           HQ+H  QN  H E
Sbjct: 314 HQQHHQQNMSHEE 326


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 109 STTFKGLSSASGTLSGMEGARAASTNIVSNRAACS 5
           STT + LSS + + S       A TN  +++++ S
Sbjct: 160 STTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQS 194


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 189 KEVIDIPVKVIVEEIKP 239
           KEV D+P   + E  KP
Sbjct: 25  KEVFDVPNNFLPERYKP 41


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 179 AEAVIDVFNGISLVDELL 126
           A  +ID+F G+  VD+LL
Sbjct: 91  AGRLIDIFLGMRNVDDLL 108


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 253 SLFNDGLISSTITLTGMSMTSFLFARRLLSMSL 155
           +LFND   +  I +TG S+   L     ++ +L
Sbjct: 233 ALFNDVFGTCLILITGKSIVQLLTCLNFITNNL 265


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 253 SLFNDGLISSTITLTGMSMTSFLFARRLLSMSL 155
           +LFND   +  I +TG S+   L     ++ +L
Sbjct: 233 ALFNDVFGTCLILITGKSIVQLLTCLNFITNNL 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,491
Number of Sequences: 336
Number of extensions: 1386
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)