Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20542
         (410 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       24   1.9  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   1.9  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    23   3.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   5.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         22   7.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         22   7.6  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    22   7.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   7.6  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   7.6  

>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
 Frame = +3

Query: 87  DKPLNVVDNLSSEQELIDQANTIKDIDN------SLRANKKEVIDIPV 212
           D+P   +D +  E+E+I+++N   D DN      S  +N K+++D  V
Sbjct: 88  DEPKTSLDPVVVEEEIIEESNG-PDGDNLVLEQGSNNSNSKDIVDFEV 134


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 54  PSIPDKVPEAEDKPLNVVDNLSSEQELI 137
           P  P   P A  +PL +VDNL+  QE++
Sbjct: 521 PGKPPGHPSAF-RPLGLVDNLAKVQEMV 547


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 74  DLVRDGRCACGEH 36
           D++  G+C CGE+
Sbjct: 63  DVINQGKCLCGEY 75


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +2

Query: 314 RNPGPPQHQEHETQNPEHHEDAE 382
           ++PG  QH  H   +  HH   +
Sbjct: 176 QHPGHSQHHHHHHHHHPHHSQQQ 198


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 9/22 (40%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
 Frame = +2

Query: 311 LRNPGP-PQHQEHETQNPEHHE 373
           L + GP P    H  Q+P HH+
Sbjct: 81  LGSDGPMPAQPPHHHQHPHHHQ 102


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 9/22 (40%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
 Frame = +2

Query: 311 LRNPGP-PQHQEHETQNPEHHE 373
           L + GP P    H  Q+P HH+
Sbjct: 81  LGSDGPMPAQPPHHHQHPHHHQ 102


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 78  EAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEV 197
           E E K L   D +S +QEL       ++ D  L+  KKEV
Sbjct: 242 EKEAKRLKE-DQISKQQELNIIEKRKEEADEVLKEKKKEV 280


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 332  QHQEHETQNPEHHEDAE 382
            QHQ+H+    +HH   +
Sbjct: 1321 QHQQHQQHQLQHHHQPQ 1337


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 290 IKRPLVDLRNPGPPQHQEHETQNPEHHEDAE 382
           ++RP  D R    P  +E  T+    H DAE
Sbjct: 214 LQRPAADSRRQEGPSTRESGTRWRTRHFDAE 244


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,393
Number of Sequences: 2352
Number of extensions: 6416
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)