Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20542
(410 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical pr... 31 0.43
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 1.7
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 1.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 1.7
Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 27 4.0
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 27 4.0
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 27 5.3
U53155-1|AAC48268.1| 393|Caenorhabditis elegans Oocyte maturati... 27 5.3
Z93380-5|CAB07601.1| 240|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z92829-8|CAB07348.1| 305|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z74032-8|CAA98462.3| 325|Caenorhabditis elegans Hypothetical pr... 27 7.0
U23484-14|AAC46763.1| 194|Caenorhabditis elegans Hypothetical p... 27 7.0
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 26 9.2
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 26 9.2
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 26 9.2
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 26 9.2
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 26 9.2
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 26 9.2
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 26 9.2
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 26 9.2
U80814-2|AAB37993.1| 335|Caenorhabditis elegans Serpentine rece... 26 9.2
U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated p... 26 9.2
M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein. 26 9.2
AC091125-5|AAK27884.2| 297|Caenorhabditis elegans Hypothetical ... 26 9.2
AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical ... 26 9.2
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 26 9.2
>Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical
protein F09C8.2 protein.
Length = 762
Score = 30.7 bits (66), Expect = 0.43
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 42 AARAPSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIK-DIDNSLRANKKEVID 203
+ + PS P KVP A K + S+QEL ++ + D+ ++L +NKKE+ID
Sbjct: 486 STKKPSQPAKVPAAPIKAPRL-----SDQELESESQKLALDVISNLFSNKKEIID 535
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 1.7
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 48 RAPSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKD-IDNSLRANKKEVIDIPVKVIV 224
RA P+K ED+ +++ S + +L Q TI++ +D+ +R K + D+ K ++
Sbjct: 621 RAGVYPEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVM 680
Query: 225 EEI 233
I
Sbjct: 681 HLI 683
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 1.7
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 48 RAPSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKD-IDNSLRANKKEVIDIPVKVIV 224
RA P+K ED+ +++ S + +L Q TI++ +D+ +R K + D+ K ++
Sbjct: 621 RAGVYPEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVM 680
Query: 225 EEI 233
I
Sbjct: 681 HLI 683
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 1.7
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 48 RAPSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKD-IDNSLRANKKEVIDIPVKVIV 224
RA P+K ED+ +++ S + +L Q TI++ +D+ +R K + D+ K ++
Sbjct: 621 RAGVYPEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVM 680
Query: 225 EEI 233
I
Sbjct: 681 HLI 683
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 1.7
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 48 RAPSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKD-IDNSLRANKKEVIDIPVKVIV 224
RA P+K ED+ +++ S + +L Q TI++ +D+ +R K + D+ K ++
Sbjct: 621 RAGVYPEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVM 680
Query: 225 EEI 233
I
Sbjct: 681 HLI 683
>Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical
protein C06G8.4 protein.
Length = 318
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 235 LISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMSSCSL 119
LI+ T+T G +T FL +R++ +L S CSL
Sbjct: 45 LINITLTNVGACVTGFLLDQRIIQSGKSMLYVSYGYCSL 83
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 60 IPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKP 239
+P+ PE +PL VV + L Q I + ++ + V++ V+V+ P
Sbjct: 126 VPESTPEPISEPLPVVQEEPASDSLTVQDEQIAQAEPAVEPEEPVVVE-HVEVVTASEDP 184
Query: 240 SLKS 251
+L+S
Sbjct: 185 TLES 188
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 27.5 bits (58), Expect = 4.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 320 PGPPQHQEHETQNPEHH 370
P PPQ Q + Q+P HH
Sbjct: 469 PPPPQQQHQQQQHPPHH 485
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 27.5 bits (58), Expect = 4.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 320 PGPPQHQEHETQNPEHH 370
P PPQ Q + Q+P HH
Sbjct: 794 PPPPQQQHQQQQHPPHH 810
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 27.5 bits (58), Expect = 4.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 320 PGPPQHQEHETQNPEHH 370
P PPQ Q + Q+P HH
Sbjct: 794 PPPPQQQHQQQQHPPHH 810
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 66 DKVPEAEDKPLNVVDNLSS-EQELIDQANTIKDIDNSLRANKKE 194
+++ ED+ L + + L E+EL+D+ N K++D + +E
Sbjct: 1253 NRILSLEDQNLELEERLQEMEEELLDEKNKKKEVDAKVEQKSEE 1296
>U53155-1|AAC48268.1| 393|Caenorhabditis elegans Oocyte maturation
defective protein2 protein.
Length = 393
Score = 27.1 bits (57), Expect = 5.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 54 PSIPDKVPEAEDKPLNVVDNLSSE 125
P + + VPE + KP++ +D+L SE
Sbjct: 25 PDMMETVPEEQQKPISHIDDLLSE 48
>Z93380-5|CAB07601.1| 240|Caenorhabditis elegans Hypothetical
protein F28C12.6 protein.
Length = 240
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 117 SSEQELIDQANTIKDIDNSLRA 182
SSE+E+ D+ I DI NS+RA
Sbjct: 95 SSEKEVYDEIAEIADITNSIRA 116
>Z92829-8|CAB07348.1| 305|Caenorhabditis elegans Hypothetical
protein F10A3.12 protein.
Length = 305
Score = 26.6 bits (56), Expect = 7.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 403 LTEETIFFSIFVVFRILCFVLLMLRG 326
L +TIF SIF+ F + C VL L G
Sbjct: 241 LVVQTIFPSIFLFFPVSCLVLFPLFG 266
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 69 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRAN---KKEVIDIPVKVIVEEIK 236
K+ E ED+ + V N +++ ++ K++ N ++N KK P+ VEE K
Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKK 396
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 26.6 bits (56), Expect = 7.0
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 120 SEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSD*KTLKCRMKMRKSRG 299
SE +L+D T D+ R +KK D K+ E+++ K K + KM KS
Sbjct: 92 SEDDLLDVKKTASKEDDKKRMDKK---DPSKKLSKEKLREEKKEQSKKVNKEKKMNKSES 148
Query: 300 L 302
+
Sbjct: 149 V 149
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 69 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRAN---KKEVIDIPVKVIVEEIK 236
K+ E ED+ + V N +++ ++ K++ N ++N KK P+ VEE K
Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKK 396
>Z74032-8|CAA98462.3| 325|Caenorhabditis elegans Hypothetical
protein F35B12.1 protein.
Length = 325
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 368 GVQDSVFRALDAAGARDFLNRLEAS*FPHFHPALQRFLIT 249
G +S++ L G LNR A FP ++P + F IT
Sbjct: 93 GFSNSLYSGLQYTGVYIALNRFCAMFFPTYYPKIFDFKIT 132
>U23484-14|AAC46763.1| 194|Caenorhabditis elegans Hypothetical
protein EEED8.3 protein.
Length = 194
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/56 (21%), Positives = 32/56 (57%)
Frame = +3
Query: 66 DKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEI 233
+ V E + + + DN + Q + + NT+K++ ++ +N+K+ + P++++ I
Sbjct: 17 EMVEEEKFEKIENTDNSENFQYVSTKGNTVKEV--NINSNEKKKKEAPIQILTAMI 70
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 26.2 bits (55), Expect = 9.2
Identities = 22/101 (21%), Positives = 41/101 (40%)
Frame = +3
Query: 45 ARAPSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIV 224
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 225 EEIKPSLKSD*KTLKCRMKMRKSRGL*SI*EIPGPRSIKST 347
E P+ ++ K K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 26.2 bits (55), Expect = 9.2
Identities = 22/101 (21%), Positives = 41/101 (40%)
Frame = +3
Query: 45 ARAPSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIV 224
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 225 EEIKPSLKSD*KTLKCRMKMRKSRGL*SI*EIPGPRSIKST 347
E P+ ++ K K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 26.2 bits (55), Expect = 9.2
Identities = 22/101 (21%), Positives = 41/101 (40%)
Frame = +3
Query: 45 ARAPSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIV 224
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 225 EEIKPSLKSD*KTLKCRMKMRKSRGL*SI*EIPGPRSIKST 347
E P+ ++ K K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 26.2 bits (55), Expect = 9.2
Identities = 22/101 (21%), Positives = 41/101 (40%)
Frame = +3
Query: 45 ARAPSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIV 224
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 225 EEIKPSLKSD*KTLKCRMKMRKSRGL*SI*EIPGPRSIKST 347
E P+ ++ K K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 26.2 bits (55), Expect = 9.2
Identities = 22/101 (21%), Positives = 41/101 (40%)
Frame = +3
Query: 45 ARAPSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIV 224
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 225 EEIKPSLKSD*KTLKCRMKMRKSRGL*SI*EIPGPRSIKST 347
E P+ ++ K K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 26.2 bits (55), Expect = 9.2
Identities = 22/101 (21%), Positives = 41/101 (40%)
Frame = +3
Query: 45 ARAPSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIV 224
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 225 EEIKPSLKSD*KTLKCRMKMRKSRGL*SI*EIPGPRSIKST 347
E P+ ++ K K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 26.2 bits (55), Expect = 9.2
Identities = 22/101 (21%), Positives = 41/101 (40%)
Frame = +3
Query: 45 ARAPSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIV 224
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 225 EEIKPSLKSD*KTLKCRMKMRKSRGL*SI*EIPGPRSIKST 347
E P+ ++ K K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 26.2 bits (55), Expect = 9.2
Identities = 22/101 (21%), Positives = 41/101 (40%)
Frame = +3
Query: 45 ARAPSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIV 224
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 225 EEIKPSLKSD*KTLKCRMKMRKSRGL*SI*EIPGPRSIKST 347
E P+ ++ K K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>U80814-2|AAB37993.1| 335|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 8 protein.
Length = 335
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 235 LISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMSSCSL 119
LI+ T+T G+ +T FL R++ + S CSL
Sbjct: 45 LINITLTNIGVCITGFLLQERIIQSGKSLFYVSYGYCSL 83
>U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated
protein 6 protein.
Length = 612
Score = 26.2 bits (55), Expect = 9.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 95 RFIFGLGDLVRDGRCACGEH 36
R+ + +G+L GRC C H
Sbjct: 277 RYFYSMGELAVGGRCKCNGH 296
>M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein.
Length = 612
Score = 26.2 bits (55), Expect = 9.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 95 RFIFGLGDLVRDGRCACGEH 36
R+ + +G+L GRC C H
Sbjct: 277 RYFYSMGELAVGGRCKCNGH 296
>AC091125-5|AAK27884.2| 297|Caenorhabditis elegans Hypothetical
protein Y67D2.7 protein.
Length = 297
Score = 26.2 bits (55), Expect = 9.2
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +2
Query: 299 PLVDLRNPGPPQHQEHETQNPEHHE 373
P+ ++R P PP Q + ++ E E
Sbjct: 116 PISEIREPAPPPRQSRDVESDEEQE 140
>AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical
protein F27B3.5 protein.
Length = 787
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 129 ELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKS 251
E+ + I + ++ N V+D +K++V +++P LKS
Sbjct: 170 EIFYLMSLIMRVFQKVKINSMHVLDDYIKILVSQLEPFLKS 210
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 129 ELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKS 251
E+ + I + ++ N V+D +K++V +++P LKS
Sbjct: 377 EIFYLMSLIMRVFQKVKINSMHVLDDYIKILVSQLEPFLKS 417
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,638,891
Number of Sequences: 27780
Number of extensions: 132339
Number of successful extensions: 691
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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