Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20541
(768 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 26 0.44
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 23 2.4
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 23 4.1
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 7.2
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 7.2
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 7.2
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 7.2
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 7.2
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 9.5
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 9.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.5
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 9.5
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 25.8 bits (54), Expect = 0.44
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 484 LGRCQYHKNFHQIHRHSPFRRYRKDRVQCK*SRRKRGSHLDRVVLQ 347
L + HK+ + +HS + RK+ Q + R++ H DRV Q
Sbjct: 45 LNSLRNHKSIYH-RQHSKNEQQRKEMEQMREREREQREHSDRVTSQ 89
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 608 EGDSDHLRDISGG*VAGDHCAVLGAEAV 525
+ D D + D++G DH A +GA+A+
Sbjct: 42 DSDGDGIGDLNGITARMDHIADIGADAL 69
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 22.6 bits (46), Expect = 4.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 414 KTAFNASRVAASEEAILTEWFFSVQERLYFTL 319
+TAF ++ A E T + SV ERL L
Sbjct: 12 RTAFTYEQLVALENKFKTTRYLSVCERLNLAL 43
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 7.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 271 SVSQYREQTGRATYSLYSRGSTLDDVATVVALAG 170
SVS R+T +++ S +DD T V + G
Sbjct: 253 SVSSETNHNERSTPRSHAKPSLIDDEPTEVTIGG 286
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 7.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 271 SVSQYREQTGRATYSLYSRGSTLDDVATVVALAG 170
SVS R+T +++ S +DD T V + G
Sbjct: 253 SVSSETNHNERSTPRSHAKPSLIDDEPTEVTIGG 286
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 318 LVLELTIFHSIFPIAGLFLNI 256
+V+ LTI + I + G+F NI
Sbjct: 39 MVIPLTIIYMIIFVTGIFGNI 59
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.8 bits (44), Expect = 7.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 271 SVSQYREQTGRATYSLYSRGSTLDDVATVVALAG 170
SVS R+T +++ S +DD T V + G
Sbjct: 253 SVSSETNHNERSTPRSHAKPSLIDDEPTEVTIGG 286
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 559 GITVPSSEQKQSGRTHCRNRMA 494
GIT+ ++E R RNRMA
Sbjct: 1119 GITLRTAEVHNRSRETARNRMA 1140
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -3
Query: 412 DRVQCK*SRRKRGSHLDRVVLQCTREALFYAP 317
DRV + + R +DR L C R + + P
Sbjct: 313 DRVLSELVSKMREMKMDRTELGCLRSIILFNP 344
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -3
Query: 412 DRVQCK*SRRKRGSHLDRVVLQCTREALFYAP 317
DRV + + R +DR L C R + + P
Sbjct: 313 DRVLSELVSKMREMKMDRTELGCLRSIILFNP 344
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 320 SLFLSLQFFTASFQSQVCFSISRTN 246
SLF LQ +T SF Q +R+N
Sbjct: 235 SLFCGLQKYTRSFAHQSINKEARSN 259
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 320 SLFLSLQFFTASFQSQVCFSISRTN 246
SLF LQ +T SF Q +R+N
Sbjct: 230 SLFCGLQKYTRSFAHQSINKEARSN 254
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,466
Number of Sequences: 438
Number of extensions: 4776
Number of successful extensions: 25
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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