Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20540
(589 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 69 8e-11
UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2; ... 50 5e-05
UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 50 5e-05
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu... 48 1e-04
UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole... 40 0.057
UniRef50_A7B5X1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.075
UniRef50_A4QMB0 Cluster: ORF64d; n=2; cellular organisms|Rep: OR... 39 0.100
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 38 0.23
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;... 37 0.30
UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing c... 37 0.30
UniRef50_A5X2G8 Cluster: Transposase; n=2; Zea mays|Rep: Transpo... 36 0.70
UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites dom... 36 0.70
UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease... 36 0.93
UniRef50_A6F7F6 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_UPI0000D57048 Cluster: PREDICTED: similar to CG17111-PA... 32 8.6
>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 79
Score = 68.9 bits (161), Expect = 8e-11
Identities = 38/62 (61%), Positives = 39/62 (62%)
Frame = +3
Query: 69 FHQSRTKVRGSKAIRYRPSSNRKYVI*RSADVTTMARRAASGKPKIXDSGGSMVAKLKLK 248
F RTKVRGSK IRYRPSSN K + M A GKPK SGGSMVAKLKLK
Sbjct: 6 FRCQRTKVRGSKTIRYRPSSNHKRCRLGIRECYWMTSLAPYGKPKFLGSGGSMVAKLKLK 65
Query: 249 GI 254
GI
Sbjct: 66 GI 67
>UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 347
Score = 49.6 bits (113), Expect = 5e-05
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +3
Query: 369 VGXGAWPFLVGAPICLVNSGNERDSSLL 452
+G GAWPFLVG ICLVNS NERD SLL
Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLL 28
>UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Eukaryota|Rep: Kluyveromyces lactis strain
NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of
Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 119
Score = 49.6 bits (113), Expect = 5e-05
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -1
Query: 418 TRQIGAPTKNGHAPXPTESRKSC*SVNPSGVRAW 317
+RQI PTKNGHAP PT+SRKS SVNP V W
Sbjct: 86 SRQITPPTKNGHAPPPTKSRKSSQSVNPYCVWTW 119
>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 72
Score = 48.4 bits (110), Expect = 1e-04
Identities = 33/66 (50%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +3
Query: 69 FHQSRTKVRGSKAIRYRPSSNRKYVI*RSADVTTMARRAASGKP----KIXDSGGSMVAK 236
FH RTKV GSK IRY PS N K R G P K SGGSMVA+
Sbjct: 6 FHCQRTKVGGSKMIRYHPSLNHK-----------RCRLGIGGSPYEKSKFLGSGGSMVAR 54
Query: 237 LKLKGI 254
LKLKGI
Sbjct: 55 LKLKGI 60
>UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3131,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 36
Score = 39.5 bits (88), Expect = 0.057
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +2
Query: 182 GSFRETKDFXLRGEYGCKAET 244
GS RETK F RGEYGCKAET
Sbjct: 16 GSVRETKVFGFRGEYGCKAET 36
>UniRef50_A7B5X1 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 76
Score = 39.1 bits (87), Expect = 0.075
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -3
Query: 329 CPGXVRFPVLSQIKPQAPLLVVPXXNSFKFQLCNHTP 219
C VRF L +IKP AP LV NSF+F C TP
Sbjct: 21 CQDQVRFFALLRIKPHAPPLVRVPVNSFEFHSCERTP 57
>UniRef50_A4QMB0 Cluster: ORF64d; n=2; cellular organisms|Rep:
ORF64d - Pinus koraiensis (Korean pine)
Length = 64
Score = 38.7 bits (86), Expect = 0.100
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -3
Query: 329 CPGXVRFPVLSQIKPQAPLLVVPXXNSFKFQLCNHTP 219
C VRF L +I+P AP LV NSF+F C TP
Sbjct: 21 CQALVRFFALHRIEPHAPPLVRAPVNSFEFHSCERTP 57
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 37.5 bits (83), Expect = 0.23
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -2
Query: 405 VHQLRTAMHHXQPNQERAVNL 343
+H+L+TAMHH NQERA+NL
Sbjct: 177 IHELKTAMHHHPRNQERAINL 197
>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 493
Score = 37.1 bits (82), Expect = 0.30
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -2
Query: 384 MHHXQPNQERAVNLSILPVSGXG 316
MHH N+ERA+NLSIL VSG G
Sbjct: 1 MHHHPQNRERAINLSILSVSGPG 23
>UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing
coactivator subunit SRm300; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to splicing
coactivator subunit SRm300 - Monodelphis domestica
Length = 598
Score = 37.1 bits (82), Expect = 0.30
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -2
Query: 384 MHHXQPNQERAVNLSILPVSGXG 316
MHH N+ERA+NLSIL VSG G
Sbjct: 1 MHHHPQNRERAINLSILSVSGPG 23
>UniRef50_A5X2G8 Cluster: Transposase; n=2; Zea mays|Rep:
Transposase - Zea mays (Maize)
Length = 738
Score = 35.9 bits (79), Expect = 0.70
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = -1
Query: 253 IPLSFSFATILPPESKIFGFPEAARRAIVVTSAD 152
IPL +SFA IL P +K+ GF RR + +TS D
Sbjct: 506 IPLLYSFAFILDPRAKMKGFSRVLRRLMNLTSTD 539
>UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites
domuncula|Rep: LPS-binding protein - Suberites domuncula
(Sponge)
Length = 451
Score = 35.9 bits (79), Expect = 0.70
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 397 LVHRFVWLIPVTNETLAC 450
LV FVWLIP+TNETL C
Sbjct: 2 LVEGFVWLIPITNETLTC 19
>UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease;
n=4; Eukaryota|Rep: RRNA intron-encoded homing
endonuclease - Oryza sativa (Rice)
Length = 66
Score = 35.5 bits (78), Expect = 0.93
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = +3
Query: 153 SADVTTMARRAASGKPKIXDSGGSMVAKLKLKGI 254
SADV A K K SGGSMVA+LKLKGI
Sbjct: 21 SADVAYRTPPAPYEKSKSLGSGGSMVARLKLKGI 54
>UniRef50_A6F7F6 Cluster: Putative uncharacterized protein; n=1;
Moritella sp. PE36|Rep: Putative uncharacterized protein
- Moritella sp. PE36
Length = 289
Score = 34.7 bits (76), Expect = 1.6
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 360 LDSVGXGAWPFL--VGAPICLVNSGNERDSSLLNRRRYLGVRGLVSRNSLTTIKILLR 527
+D VG G+W + G ICL+N ++ + R L V+ L+S SLT I+ L+
Sbjct: 45 VDPVGGGSWIAMNQAGLSICLLNYYQQKPPEKILISRGLLVKSLISNTSLTKIRAALK 102
>UniRef50_UPI0000D57048 Cluster: PREDICTED: similar to CG17111-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG17111-PA - Tribolium castaneum
Length = 697
Score = 32.3 bits (70), Expect = 8.6
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -3
Query: 374 TNRIKKELLICQSFRCPGXVR-FPVLSQIKPQAPLLVVPXXNSFKFQLCNHTPPGVXNLW 198
T + +++ CP + FP L+++ + ++ +FKF V +
Sbjct: 474 TEHNDESIILLDDRGCPTNINIFPALTKVATNDSIKLIAKFQAFKFSSSPIVRFSVIVQF 533
Query: 197 FPGSCPPSHCSN 162
P SCPP C N
Sbjct: 534 CPESCPPVDCGN 545
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,402,804
Number of Sequences: 1657284
Number of extensions: 9589963
Number of successful extensions: 20844
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20841
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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