Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20537
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    29   0.047
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       26   0.25 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.1  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   4.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   4.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.1  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   4.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.4  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   9.5  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 28.7 bits (61), Expect = 0.047
 Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
 Frame = -1

Query: 374 WYGIQKPSLPINGTVYN*Q--GCRWIFTCQGCDHLMECCALPNGN 246
           W G     L I G +YN +   C W     GC     C   PNGN
Sbjct: 119 WNGTATEQLCIGGLLYNERTHSCDWPENVDGCQKHPLCNDDPNGN 163


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -2

Query: 511 RALDSLLQAFLCTNQCNL*HSLSQYCTDL-HLEHFFAGFSSPQELQYGMASKNPL 350
           R L  + +A+   N  +  + LS     L ++ H   GFS P E+ YG    NPL
Sbjct: 302 RELGRIFRAYCRENHASWVNHLSNIEDCLNYVPHISTGFS-PYEILYGRTPPNPL 355



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 423 TWNISLRASLHHKNCSMVWHPKT 355
           TW  SLRA+      S + HP++
Sbjct: 272 TWQNSLRAADIQPTLSSIRHPES 294


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 31  GSETNEVMAFKYHYLSYILREIHN 102
           GS  NE        LSY+ RE++N
Sbjct: 339 GSWINEESKLSLDLLSYVPREVYN 362


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 418 EHFFAGFSSPQELQYGMASKN 356
           +H + GF +  E QYG++  N
Sbjct: 251 KHEYTGFGTVIEFQYGLSLGN 271


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 418 EHFFAGFSSPQELQYGMASKN 356
           +H + GF +  E QYG++  N
Sbjct: 252 KHEYTGFGTVIEFQYGLSLGN 272


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 418 EHFFAGFSSPQELQYGMASKN 356
           +H + GF +  E QYG++  N
Sbjct: 252 KHEYTGFGTVIEFQYGLSLGN 272


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 492 CRLFCAQTSAISDTP 448
           CRLFC++ +A+   P
Sbjct: 53  CRLFCSEAAALWPKP 67


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 125 QRRKKRSMMLLKYLLKN 175
           QR+K  S  +++YL+KN
Sbjct: 78  QRQKDGSRTIIRYLIKN 94


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +1

Query: 475 CTKKPATESPVPGTNC 522
           CT +P  + P P  +C
Sbjct: 92  CTSRPKLQEPQPSQHC 107


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 451 SLSQYCTDLHLEHFFAGFSSPQELQYG 371
           SLS+   D  L+ +F  F +   L YG
Sbjct: 78  SLSEVKMDFTLDFYFRQFWTDPRLAYG 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,324
Number of Sequences: 336
Number of extensions: 3936
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)