Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20537
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive ...    25   3.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   3.9  
EF519470-2|ABP73550.1|  177|Anopheles gambiae CTL4 protein.            23   6.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.0  

>AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR20 protein.
          Length = 175

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 284 DHLMECCALP 255
           DHLM+CCA P
Sbjct: 48  DHLMQCCAEP 57


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 346 GREGFWMPYHTAVLVVKRSPQRNVP 420
           GR+    PY+T +L+V+ S    VP
Sbjct: 791 GRDCEAAPYYTGILLVRHSQSDEVP 815


>EF519470-2|ABP73550.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 336 TINGQRGFLDAIPYCSSCGEE-KPAKKCSKCKSVQ 437
           T N +  + DA+ YCSS G      K  ++C+ +Q
Sbjct: 54  TPNLRLNWFDAVSYCSSIGMSIATIKDTNECQLLQ 88


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = +3

Query: 375 YCSSCGEEKPAKKCSKCK 428
           +C  CG  +    C +CK
Sbjct: 366 HCIDCGANRDGPNCERCK 383


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 301  LLVKAVTI*WNVVHSLMGIPSRSL 230
            L+  A+++ W VVHS+ GI  + L
Sbjct: 1983 LVGSALSVLWMVVHSVHGIMFKDL 2006


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,936
Number of Sequences: 2352
Number of extensions: 16471
Number of successful extensions: 65
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)