Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20536
(577 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 160 6e-40
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 160 6e-40
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 160 6e-40
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 51 5e-07
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 51 7e-07
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 51 7e-07
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 43 1e-04
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 43 1e-04
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 43 1e-04
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 42 2e-04
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 42 4e-04
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 40 0.001
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 40 0.002
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 40 0.002
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 1.8
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 1.8
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 29 1.8
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 1.8
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 1.8
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 29 3.1
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 5.5
AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily a... 28 5.5
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 27 7.2
U40797-13|AAB37545.1| 193|Caenorhabditis elegans Hypothetical p... 27 7.2
Z50016-15|CAA90319.1| 329|Caenorhabditis elegans Hypothetical p... 27 9.5
U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical ... 27 9.5
AL032621-9|CAA21496.1| 329|Caenorhabditis elegans Hypothetical ... 27 9.5
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 160 bits (389), Expect = 6e-40
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +3
Query: 255 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEV 434
EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEV
Sbjct: 196 EALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEV 255
Query: 435 KSVEMHHEALQEAVPGDNVGFNVK 506
KSVEMHHE+L EAVPGDNVGFNVK
Sbjct: 256 KSVEMHHESLPEAVPGDNVGFNVK 279
Score = 134 bits (324), Expect = 4e-32
Identities = 60/83 (72%), Positives = 68/83 (81%)
Frame = +1
Query: 10 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 189
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 190 MPWFKGWQVERKEGKADGKCLMK 258
MPWFKGW VERKEG A GK L++
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLE 196
Score = 35.1 bits (77), Expect = 0.036
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 458 SSPRSCTWRQCRFQRKEVSVKELRRGYVAGDSKNNPPKGA 577
S P + F K VSVK++RRG V DSK +P K A
Sbjct: 264 SLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEA 303
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 160 bits (389), Expect = 6e-40
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +3
Query: 255 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEV 434
EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEV
Sbjct: 230 EALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEV 289
Query: 435 KSVEMHHEALQEAVPGDNVGFNVK 506
KSVEMHHE+L EAVPGDNVGFNVK
Sbjct: 290 KSVEMHHESLPEAVPGDNVGFNVK 313
Score = 140 bits (339), Expect = 6e-34
Identities = 64/86 (74%), Positives = 71/86 (82%)
Frame = +1
Query: 1 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 180
VKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE
Sbjct: 145 VKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEV 204
Query: 181 STKMPWFKGWQVERKEGKADGKCLMK 258
S+ MPWFKGW VERKEG A GK L++
Sbjct: 205 SSNMPWFKGWAVERKEGNASGKTLLE 230
Score = 35.1 bits (77), Expect = 0.036
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 458 SSPRSCTWRQCRFQRKEVSVKELRRGYVAGDSKNNPPKGA 577
S P + F K VSVK++RRG V DSK +P K A
Sbjct: 298 SLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEA 337
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 160 bits (389), Expect = 6e-40
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +3
Query: 255 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEV 434
EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEV
Sbjct: 230 EALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEV 289
Query: 435 KSVEMHHEALQEAVPGDNVGFNVK 506
KSVEMHHE+L EAVPGDNVGFNVK
Sbjct: 290 KSVEMHHESLPEAVPGDNVGFNVK 313
Score = 140 bits (339), Expect = 6e-34
Identities = 64/86 (74%), Positives = 71/86 (82%)
Frame = +1
Query: 1 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 180
VKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE
Sbjct: 145 VKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEV 204
Query: 181 STKMPWFKGWQVERKEGKADGKCLMK 258
S+ MPWFKGW VERKEG A GK L++
Sbjct: 205 SSNMPWFKGWAVERKEGNASGKTLLE 230
Score = 35.1 bits (77), Expect = 0.036
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 458 SSPRSCTWRQCRFQRKEVSVKELRRGYVAGDSKNNPPKGA 577
S P + F K VSVK++RRG V DSK +P K A
Sbjct: 298 SLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEA 337
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 51.2 bits (117), Expect = 5e-07
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = +1
Query: 1 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLE 177
VK L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +VP SG G + +
Sbjct: 247 VKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKD 306
Query: 178 PST--KMPWFKG 207
T + W+ G
Sbjct: 307 RPTGSEGNWYSG 318
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 EALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE 431
E +D +LP R + P+R + + Y +GTV +G++E+G ++ G +V P +
Sbjct: 323 EFIDVLLPSYKRDFNGPVRCTVAEKYS--EMGTVIIGKMESGCVQKGDTLVVMPNKQPVQ 380
Query: 432 VKSVEMHHEALQEAVPGDNVGFNVK 506
V + + V GDN+ F +K
Sbjct: 381 VLQIWADDVETERVVAGDNIKFKLK 405
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 50.8 bits (116), Expect = 7e-07
Identities = 26/70 (37%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 177
V QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 308 VTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 363
Query: 178 PSTKMPWFKG 207
++ W+ G
Sbjct: 364 -RMELDWYDG 372
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +3
Query: 255 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEV 434
E +D+ + P P+D PLR+ + DV K+ V G++E+G ++ V+ +++T
Sbjct: 377 ELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMSSVTAAT 435
Query: 435 KSVEMHHEALQEAVPGDNV 491
+++ + GD +
Sbjct: 436 VKECANNDGSRHCFAGDYI 454
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 50.8 bits (116), Expect = 7e-07
Identities = 26/70 (37%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 177
V QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 326 VTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 381
Query: 178 PSTKMPWFKG 207
++ W+ G
Sbjct: 382 -RMELDWYDG 390
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +3
Query: 255 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEV 434
E +D+ + P P+D PLR+ + DV K+ V G++E+G ++ V+ +++T
Sbjct: 395 ELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMSSVTAAT 453
Query: 435 KSVEMHHEALQEAVPGDNV 491
+++ + GD +
Sbjct: 454 VKECANNDGSRHCFAGDYI 472
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Frame = +3
Query: 270 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAPANITTEVKSV- 443
++P + ++P+ + VY I G GTV G++E G+LK G I + T VKSV
Sbjct: 242 VIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVI 300
Query: 444 ---EMHHEALQEAVPGDNVGFNVK----KCPSRNCVVV 536
E + + +A PGD +G ++ K R CV++
Sbjct: 301 SGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCVLL 338
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Frame = +3
Query: 270 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAPANITTEVKSV- 443
++P + ++P+ + VY I G GTV G++E G+LK G I + T VKSV
Sbjct: 243 VIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVI 301
Query: 444 ---EMHHEALQEAVPGDNVGFNVK----KCPSRNCVVV 536
E + + +A PGD +G ++ K R CV++
Sbjct: 302 SGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCVLL 339
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Frame = +3
Query: 270 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAPANITTEVKSV- 443
++P + ++P+ + VY I G GTV G++E G+LK G I + T VKSV
Sbjct: 243 VIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVI 301
Query: 444 ---EMHHEALQEAVPGDNVGFNVK----KCPSRNCVVV 536
E + + +A PGD +G ++ K R CV++
Sbjct: 302 SGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCVLL 339
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 300 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQ 467
P + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 372 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVG 431
Query: 468 EAVPGDNVGFNVKKCPSRNCVVVMLLVTPK 557
G + F +KK P ++ M+LV PK
Sbjct: 432 IVKCGQSASFALKKIPKKDVRKGMVLVDPK 461
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 300 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQ 467
P + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 373 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRCLVG 432
Query: 468 EAVPGDNVGFNVKKCPSRNCVVVMLLVTPK 557
G + F +KK P ++ M+LV PK
Sbjct: 433 IVKCGQSASFALKKIPKKDVRQGMVLVDPK 462
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/60 (40%), Positives = 29/60 (48%)
Frame = +2
Query: 74 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVKKAKLTENAS 253
+S + P +SRR T Q L D TETTC C GSRDG + +K L E S
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 255 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANITT 428
+ALD++ P R +P+ I G GTV VG +E GVLK G V + T
Sbjct: 224 DALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQT 283
Query: 429 EVKSVEMHHEALQEAVPGDNVG 494
+++ ++++E GD+ G
Sbjct: 284 TASDIQVFGKSVKEVRAGDHCG 305
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 255 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANITT 428
+ALD++ P R +P+ I G GTV VG +E GVLK G V + T
Sbjct: 224 DALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQT 283
Query: 429 EVKSVEMHHEALQEAVPGDNVG 494
+++ ++++E GD+ G
Sbjct: 284 TASDIQVFGKSVKEVRAGDHCG 305
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 35.5 bits (78), Expect = 0.027
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = +3
Query: 270 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 449
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 191 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLET 250
Query: 450 HHEALQEAVPGDNVGFNV 503
+ + + G F V
Sbjct: 251 WKQRVGQVAAGARAAFLV 268
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 35.5 bits (78), Expect = 0.027
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = +3
Query: 270 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 449
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 150 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLET 209
Query: 450 HHEALQEAVPGDNVGFNV 503
+ + + G F V
Sbjct: 210 WKQRVGQVAAGARAAFLV 227
>Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical
protein F35C5.4 protein.
Length = 172
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -1
Query: 514 GHFFTLKPTLSPG-TASWRASWCISTDLTSVVMLAGAKTTMVPGFN--TPVSTLPTGTVP 344
G+ FT +S + S R S +S D T V + + VP + VST PT
Sbjct: 35 GNTFTQSSAVSESQSTSERTSRSVSPDSTPVRVTTSTLLSTVPTSQDISGVSTAPTTKAT 94
Query: 343 IPPILY 326
+PPI Y
Sbjct: 95 LPPITY 100
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 92 PHTSRRLATTQLLSLSCPFLD 154
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 92 PHTSRRLATTQLLSLSCPFLD 154
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 384 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGD 485
KPGTI F P ITTE K H L+ + GD
Sbjct: 360 KPGTIQWFDPVTITTESKM----HVTLENTIDGD 389
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 92 PHTSRRLATTQLLSLSCPFLD 154
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 92 PHTSRRLATTQLLSLSCPFLD 154
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 3.1
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -1
Query: 556 FGVTSNITTTQFLDGHFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNT 377
F + SN TTT T T +PGT + +T S GA TT PG
Sbjct: 2013 FDLNSNFTTTTT------TSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGP 2063
Query: 376 PVSTLPT-GTVPIPPILYTSCRGRRRGL 296
V+ PT G PI+ T+ RG+
Sbjct: 2064 TVTAAPTNGISTTQPIITTTKGAEGRGV 2091
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 3.1
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -1
Query: 556 FGVTSNITTTQFLDGHFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNT 377
F + SN TTT T T +PGT + +T S GA TT PG
Sbjct: 2013 FDLNSNFTTTTT------TSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGP 2063
Query: 376 PVSTLPT-GTVPIPPILYTSCRGRRRGL 296
V+ PT G PI+ T+ RG+
Sbjct: 2064 TVTAAPTNGISTTQPIITTTKGAEGRGV 2091
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 3.1
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -1
Query: 556 FGVTSNITTTQFLDGHFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNT 377
F + SN TTT T T +PGT + +T S GA TT PG
Sbjct: 2013 FDLNSNFTTTTT------TSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGP 2063
Query: 376 PVSTLPT-GTVPIPPILYTSCRGRRRGL 296
V+ PT G PI+ T+ RG+
Sbjct: 2064 TVTAAPTNGISTTQPIITTTKGAEGRGV 2091
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = -1
Query: 547 TSNITTTQFLDGHFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVS 368
TS +TT + T+ + ++ ++ ST TS + + T P T +
Sbjct: 300 TSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLST 359
Query: 367 TLPTGTVP 344
++PT T P
Sbjct: 360 SIPTTTTP 367
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = -1
Query: 547 TSNITTTQFLDGHFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVS 368
TS +TT + T+ + ++ ++ ST TS + + T P T +
Sbjct: 300 TSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLST 359
Query: 367 TLPTGTVP 344
++PT T P
Sbjct: 360 SIPTTTTP 367
>AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily
assigned gene nameprotein 40 protein.
Length = 714
Score = 27.9 bits (59), Expect = 5.5
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 360 GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGD--NVGFNVKKCPS 518
G++ +G+ + G I+ A TE KSV MH +L + GD + F++K P+
Sbjct: 118 GKIGSGIAR-GHIL---SAGAFTECKSVSMHSTSLNRTIRGDYYRILFDIKMRPN 168
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 400 TMVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLSVGRAGGRM 269
++V G N + +PT T P+ P + +S R +R S G M
Sbjct: 332 SLVEGLNGSPTPIPTVTDPVNPTVNSSTRRKRHSSSKSSNGKSM 375
>U40797-13|AAB37545.1| 193|Caenorhabditis elegans Hypothetical
protein C28C12.2 protein.
Length = 193
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 246 MPHEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGR 365
+P E+ A+ PP RP+ +PLR Q T PV R
Sbjct: 116 LPAESSIAVSPPPRPSSEPLRHLSQVSLSARPASTEPVRR 155
>Z50016-15|CAA90319.1| 329|Caenorhabditis elegans Hypothetical
protein Y45F3A.1 protein.
Length = 329
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -1
Query: 463 RASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVPIPPILY 326
R + +S++ +S+ L + ++ TP TGT PIP +++
Sbjct: 214 RKPYIVSSEASSLEDLVTSTGSLTHDHFTPEHQFKTGTAPIPTVVF 259
>U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical
protein T10E9.2 protein.
Length = 720
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 383 ETRYHCCLCPRQH 421
E ++ CCLCPR H
Sbjct: 346 EFKWRCCLCPRAH 358
>AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical
protein Y53H1A.3 protein.
Length = 201
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Frame = -3
Query: 428 SSDVGGGKDNNGTWF--QHTS---FNSADGHGTNTTDFVY 324
S +V GK ++G W Q TS F DGH T T V+
Sbjct: 97 SLNVAAGKTHSGVWLGAQRTSATAFRWTDGHTTGTEAMVF 136
>AL032621-9|CAA21496.1| 329|Caenorhabditis elegans Hypothetical
protein Y45F3A.1 protein.
Length = 329
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -1
Query: 463 RASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVPIPPILY 326
R + +S++ +S+ L + ++ TP TGT PIP +++
Sbjct: 214 RKPYIVSSEASSLEDLVTSTGSLTHDHFTPEHQFKTGTAPIPTVVF 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,552,778
Number of Sequences: 27780
Number of extensions: 361984
Number of successful extensions: 1207
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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