Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20536
(577 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 174 6e-46
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 174 6e-46
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 174 6e-46
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 162 2e-42
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 51 7e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 6.6
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 6.6
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 21 6.6
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 8.7
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 174 bits (423), Expect = 6e-46
Identities = 78/86 (90%), Positives = 82/86 (95%)
Frame = +1
Query: 1 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 180
VKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE
Sbjct: 72 VKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEV 131
Query: 181 STKMPWFKGWQVERKEGKADGKCLMK 258
S+KMPWFKGW VERKEGK +GKCL++
Sbjct: 132 SSKMPWFKGWTVERKEGKVEGKCLIE 157
Score = 33.5 bits (73), Expect = 0.002
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 255 EALDAILPPARPTDK 299
EALDAILPP RPTDK
Sbjct: 157 EALDAILPPTRPTDK 171
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 174 bits (423), Expect = 6e-46
Identities = 78/86 (90%), Positives = 82/86 (95%)
Frame = +1
Query: 1 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 180
VKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE
Sbjct: 88 VKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEV 147
Query: 181 STKMPWFKGWQVERKEGKADGKCLMK 258
S+KMPWFKGW VERKEGK +GKCL++
Sbjct: 148 SSKMPWFKGWTVERKEGKVEGKCLIE 173
Score = 165 bits (400), Expect = 4e-43
Identities = 77/84 (91%), Positives = 79/84 (94%)
Frame = +3
Query: 255 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEV 434
EALDAILPP RPTDK LRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V FAPA +TTEV
Sbjct: 173 EALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEV 232
Query: 435 KSVEMHHEALQEAVPGDNVGFNVK 506
KSVEMHHEALQEAVPGDNVGFNVK
Sbjct: 233 KSVEMHHEALQEAVPGDNVGFNVK 256
Score = 41.1 bits (92), Expect = 8e-06
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +2
Query: 494 FQRKEVSVKELRRGYVAGDSKN 559
F K VSVKELRRGYVAGDSKN
Sbjct: 253 FNVKNVSVKELRRGYVAGDSKN 274
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 174 bits (423), Expect = 6e-46
Identities = 78/86 (90%), Positives = 82/86 (95%)
Frame = +1
Query: 1 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 180
VKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE
Sbjct: 145 VKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEV 204
Query: 181 STKMPWFKGWQVERKEGKADGKCLMK 258
S+KMPWFKGW VERKEGK +GKCL++
Sbjct: 205 SSKMPWFKGWTVERKEGKVEGKCLIE 230
Score = 165 bits (400), Expect = 4e-43
Identities = 77/84 (91%), Positives = 79/84 (94%)
Frame = +3
Query: 255 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEV 434
EALDAILPP RPTDK LRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V FAPA +TTEV
Sbjct: 230 EALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEV 289
Query: 435 KSVEMHHEALQEAVPGDNVGFNVK 506
KSVEMHHEALQEAVPGDNVGFNVK
Sbjct: 290 KSVEMHHEALQEAVPGDNVGFNVK 313
Score = 55.2 bits (127), Expect = 4e-10
Identities = 25/28 (89%), Positives = 25/28 (89%)
Frame = +2
Query: 494 FQRKEVSVKELRRGYVAGDSKNNPPKGA 577
F K VSVKELRRGYVAGDSKNNPPKGA
Sbjct: 310 FNVKNVSVKELRRGYVAGDSKNNPPKGA 337
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 162 bits (394), Expect = 2e-42
Identities = 72/86 (83%), Positives = 79/86 (91%)
Frame = +1
Query: 1 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 180
VKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKKIGYN A+VAFVPISGWHGDNMLEP
Sbjct: 145 VKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEP 204
Query: 181 STKMPWFKGWQVERKEGKADGKCLMK 258
S K PW+KGW+VERK+G ADGK L++
Sbjct: 205 SPKTPWYKGWKVERKDGNADGKTLIE 230
Score = 160 bits (388), Expect = 1e-41
Identities = 74/84 (88%), Positives = 79/84 (94%)
Frame = +3
Query: 255 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEV 434
EALDAILPP+RPTDK LRLPLQDVYKIGGIGTVPVGRVETG+LKPG +V FAPA +TTEV
Sbjct: 230 EALDAILPPSRPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEV 289
Query: 435 KSVEMHHEALQEAVPGDNVGFNVK 506
KSVEMHHEAL EA+PGDNVGFNVK
Sbjct: 290 KSVEMHHEALTEALPGDNVGFNVK 313
Score = 51.2 bits (117), Expect = 7e-09
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 494 FQRKEVSVKELRRGYVAGDSKNNPPKGA 577
F K +SVKELRRGYVAGDSKN PP+GA
Sbjct: 310 FNVKNISVKELRRGYVAGDSKNQPPRGA 337
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 487 LSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFN 380
L PG A ++T++ SV M A T +PG N
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDN 307
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 51.2 bits (117), Expect = 7e-09
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +3
Query: 435 KSVEMHHEALQEAVPGDNVGFNVK 506
KSVEMHHEAL EA+PGDNVGFNVK
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVK 24
Score = 51.2 bits (117), Expect = 7e-09
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 494 FQRKEVSVKELRRGYVAGDSKNNPPKGA 577
F K +SVKELRRGYVAGDSKN PP+GA
Sbjct: 21 FNVKNISVKELRRGYVAGDSKNQPPRGA 48
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 189 FG*RLQHVVSVPSRNGHESDSSWV 118
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 32 WIPLNHHTVSPDLRKSRRKY 91
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 21.4 bits (43), Expect = 6.6
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -3
Query: 560 CFWSHQQHNHDAIP*RTLLYVETYIVSRYSFLESFVVH 447
C++S ++H D LYV + RY S H
Sbjct: 17 CYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTH 54
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 84 LLDFLKSGLTVWWFSGIH 31
L F++SG+T W S I+
Sbjct: 56 LSHFIESGITAIWLSPIN 73
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,353
Number of Sequences: 438
Number of extensions: 4171
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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