Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20534
(686 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0665 - 31003333-31003680,31003773-31003854,31004068-310041... 84 9e-17
05_04_0096 - 17931061-17931435,17931539-17931620,17932319-179324... 83 2e-16
05_06_0123 + 25817172-25817470,25818983-25819133,25819217-258193... 81 1e-15
05_06_0187 - 26212133-26212477,26212564-26212645,26213066-262131... 80 1e-15
05_01_0589 - 5281105-5281434,5281532-5281613,5281833-5281963,528... 79 2e-15
01_01_0638 - 4819365-4819685,4819702-4819882,4820018-4820073,482... 73 2e-13
07_01_0702 + 5288588-5288889,5289257-5289407,5289543-5289725,529... 73 3e-13
01_06_0546 + 30124693-30124970,30125711-30125861,30125955-301261... 73 3e-13
07_03_0211 + 15239636-15241132 69 3e-12
01_07_0132 - 41298184-41298558,41298648-41298729,41298850-412989... 66 2e-11
07_03_1468 - 26739872-26740912 29 3.5
08_02_1177 + 24946763-24947275 29 4.6
09_04_0021 - 13861369-13861538,13862274-13862432,13862493-138627... 28 6.0
06_01_0652 - 4715017-4715122,4715278-4715402,4715524-4715676 28 6.0
10_08_0036 + 14325793-14326457,14326610-14328035 28 8.0
>01_06_0665 -
31003333-31003680,31003773-31003854,31004068-31004198,
31004272-31004370,31004511-31004666,31004877-31004951,
31005554-31005736,31005833-31005983,31006732-31007027
Length = 506
Score = 84.2 bits (199), Expect = 9e-17
Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 5/91 (5%)
Frame = +1
Query: 10 AIPKHIMTGTGIALFDHIAECLANFMKEHG----VYEERLA-LGFTFSFPLKQLGLTKGV 174
AIP H+M GT + LFD IA L +F+K G + E R LGFTFSFP+ Q ++ G
Sbjct: 138 AIPPHLMVGTSMELFDFIAAELESFVKTEGEDFHLPEGRQRELGFTFSFPVHQTSISSGT 197
Query: 175 LQRWTKGFSCSGVVGEDVVQGLKDAIAEEGM 267
L +WTKGFS +G VGEDVV L A+ +G+
Sbjct: 198 LIKWTKGFSINGTVGEDVVAELSRAMERQGL 228
Score = 58.4 bits (135), Expect = 5e-09
Identities = 30/58 (51%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 470 WG*-RQPRLRADRVDREVDVTSINPGKQIQEKMISGMYLGELVRLALVKFTRMGLLFG 640
WG + RL D +D S+NPG+QI EKMISGMYLGE+VR L+K LFG
Sbjct: 293 WGNFKSERLPRSDYDNALDFESLNPGEQIYEKMISGMYLGEIVRRILLKLAHDASLFG 350
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +3
Query: 267 VQIDICAILNDTTGTLMSCAWKNHNCKIGLIVGTGSNACYVEKTANCELFDG-EPDKEEL 443
+ + + A++NDT GTL + +++ +I+GTG+NA YVE + G P +
Sbjct: 228 LDMKVTALVNDTVGTLAGGRYVDNDVAAAVILGTGTNAAYVEHANAIPKWTGLLPRSGNM 287
Query: 444 LINTEWGAF 470
+IN EWG F
Sbjct: 288 VINMEWGNF 296
>05_04_0096 -
17931061-17931435,17931539-17931620,17932319-17932446,
17932523-17932621,17932739-17932894,17934120-17934194,
17934582-17934749,17934825-17934993,17936640-17936923
Length = 511
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/85 (47%), Positives = 54/85 (63%)
Frame = +1
Query: 13 IPKHIMTGTGIALFDHIAECLANFMKEHGVYEERLALGFTFSFPLKQLGLTKGVLQRWTK 192
IP+++ GT LF+ IA L NF++ G E ALGFTFSFP++Q ++ G L RWTK
Sbjct: 141 IPENLTKGTSDDLFNFIASALKNFIEREGGEVEGRALGFTFSFPVRQTSISSGTLIRWTK 200
Query: 193 GFSCSGVVGEDVVQGLKDAIAEEGM 267
FS VG+DV Q L +A+A G+
Sbjct: 201 EFSIEEAVGKDVAQCLNEALARNGL 225
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +3
Query: 267 VQIDICAILNDTTGTLMSCAWKNHNCKIGLIVGTGSNACYVEKT-ANCELFDGEPDKEEL 443
+ + + ++N+T GTL + + + +I+G G+NACY+E+ A + + E
Sbjct: 225 LNMKVNVLVNNTVGTLALGHYYDDDTVAAVIIGAGTNACYIERNDAIIKSLGRVTNSERT 284
Query: 444 LINTEWGAF 470
++N EWG+F
Sbjct: 285 VVNVEWGSF 293
Score = 34.3 bits (75), Expect = 0.092
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 470 WG*-RQPRLRADRVDREVDVTSINPGKQIQEKMISGMYLGELVRLALVKFTRMGLLFG 640
WG R P++ D + + N Q EKMISG+YLGE+ RL K +FG
Sbjct: 290 WGSFRPPQIELTPYDICFNNETWNYYDQGFEKMISGVYLGEIARLVFQKMAEESDIFG 347
>05_06_0123 +
25817172-25817470,25818983-25819133,25819217-25819399,
25819740-25819814,25819985-25820140,25820275-25820373,
25820457-25820587,25821077-25821158,25821251-25821598
Length = 507
Score = 80.6 bits (190), Expect = 1e-15
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Frame = +1
Query: 10 AIPKHIMTGTGIALFDHIAECLANFMKEHG----VYEERLA-LGFTFSFPLKQLGLTKGV 174
+IP H+M GT + LFD IA L+ F+ G + E R LGFTFSFP+ Q ++ G
Sbjct: 139 SIPPHLMVGTSMELFDFIASALSKFVDTEGDDFHLPEGRQRELGFTFSFPVSQTSISSGT 198
Query: 175 LQRWTKGFSCSGVVGEDVVQGLKDAIAEEGM 267
L +WTKGFS + VGEDVV L A+ +G+
Sbjct: 199 LIKWTKGFSINDAVGEDVVSELGKAMERQGL 229
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 470 WG*-RQPRLRADRVDREVDVTSINPGKQIQEKMISGMYLGELVRLALVKFTRMGLLFG 640
WG + +L D+ +D S+NPG+QI EK+ISGMYLGE+VR L+K LFG
Sbjct: 294 WGSFKSDKLPLSEFDKAMDFESLNPGEQIYEKLISGMYLGEIVRRILLKLAHDAALFG 351
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 267 VQIDICAILNDTTGTLMSCAWKNHNCKIGLIVGTGSNACYVEKTANCELFDG-EPDKEEL 443
+ + I A++NDT GTL + +++ +I+GTG+NA YVE + G P +
Sbjct: 229 LDMKIAALVNDTVGTLAGGRYADNSVVAAIILGTGTNAAYVENANAIPKWTGLLPRSGNM 288
Query: 444 LINTEWGAFGDD 479
+INTEWG+F D
Sbjct: 289 VINTEWGSFKSD 300
>05_06_0187 -
26212133-26212477,26212564-26212645,26213066-26213196,
26213267-26213365,26213627-26213782,26213891-26213965,
26214156-26214338,26214431-26214581,26215456-26215718
Length = 494
Score = 80.2 bits (189), Expect = 1e-15
Identities = 44/91 (48%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Frame = +1
Query: 10 AIPKHIMTGTGIALFDHIAECLANFMKEHG----VYEERLA-LGFTFSFPLKQLGLTKGV 174
+IP H+MTG LFD IA LA F+ G + E R LGFTFSFP+KQ + G
Sbjct: 127 SIPPHLMTGGSNELFDFIASSLAKFVASEGEDFHLAEGRQRELGFTFSFPVKQTSIASGT 186
Query: 175 LQRWTKGFSCSGVVGEDVVQGLKDAIAEEGM 267
L WTKGFS VGEDVV L A+ +G+
Sbjct: 187 LINWTKGFSIDETVGEDVVTELTKALERQGL 217
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +2
Query: 470 WG*-RQPRLRADRVDREVDVTSINPGKQIQEKMISGMYLGELVRLALVKFTRMGLLFGGQ 646
WG R L D+ +D S+NPG+Q+ EK+ISGMYLGE+VR L+K LFG +
Sbjct: 282 WGNFRSSHLPLTEFDQALDAESLNPGEQVYEKLISGMYLGEIVRRVLLKMAEEASLFGDE 341
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +3
Query: 267 VQIDICAILNDTTGTLMSCAWKNHNCKIGLIVGTGSNACYVEK-TANCELFDGEPDKEEL 443
+ + + A++NDT GTL + +++ +I+GTG+NA YVE+ A + D P ++
Sbjct: 217 LDMKVTALINDTIGTLAGGRYDDNDVIAAVILGTGTNAAYVERANAIPKWHDLLPKSGDM 276
Query: 444 LINTEWGAF 470
+IN EWG F
Sbjct: 277 VINMEWGNF 285
>05_01_0589 -
5281105-5281434,5281532-5281613,5281833-5281963,
5282029-5282169,5282274-5282429,5282522-5282596,
5282777-5282956,5283097-5283247,5283526-5283612,
5284239-5284349,5284447-5284634
Length = 543
Score = 79.4 bits (187), Expect = 2e-15
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Frame = +1
Query: 10 AIPKHIMTGTGIALFDHIAECLANFMKEHG---VYEERLA-LGFTFSFPLKQLGLTKGVL 177
+IP H+M+G LF IA LA F+ + G V+ +R LGFTFSFP++Q + G L
Sbjct: 168 SIPPHLMSGNSSELFGFIASALAKFVADEGHNAVFNDRQRELGFTFSFPVRQTSIASGTL 227
Query: 178 QRWTKGFSCSGVVGEDVVQGLKDAIAEEGM 267
+WTK FS VGEDVV L+ A+ ++G+
Sbjct: 228 IKWTKAFSIDDAVGEDVVAELQMAMEKQGL 257
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 279 ICAILNDTTGTLMSCAWKNHNCKIGLIVGTGSNACYVEKTANCELFDGE-PDKEELLINT 455
+ A++NDT GTL + ++ + + +G+I+GTGSNA Y+EK +GE P ++INT
Sbjct: 261 VSALINDTVGTLAAGSYYDEDIVVGVILGTGSNAAYLEKANAIPKLEGELPKSGNMVINT 320
Query: 456 EWGAFGDDGSLDFVRTELIEK*TSHP*TLANKFKRR 563
EWG F E ++K + +P A+ F RR
Sbjct: 321 EWGNFSSSCLPITEYDEALDKESLNPGEQAS-FSRR 355
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 14/58 (24%)
Frame = +2
Query: 509 DREVDVTSINPGKQ--------------IQEKMISGMYLGELVRLALVKFTRMGLLFG 640
D +D S+NPG+Q I EK+ISGMYLGE+VR L+K + +FG
Sbjct: 336 DEALDKESLNPGEQASFSRRLHTPHMSKIFEKLISGMYLGEIVRRVLLKISLQSSIFG 393
>01_01_0638 -
4819365-4819685,4819702-4819882,4820018-4820073,
4820107-4820148,4820484-4820639,4820681-4820809,
4821072-4821254,4821374-4821524,4821670-4821848
Length = 465
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Frame = +1
Query: 10 AIPKHIMTGTGIALFDHIAECLANFM--KEHGV---YEERLALGFTFSFPLKQLGLTKGV 174
+IP H+M+GT LF IA L F+ +E G ++ LGFTFSFP++Q + G
Sbjct: 99 SIPPHLMSGTSSELFGFIAGELGKFVAEEEEGTDMPNGKKKELGFTFSFPVRQRSVASGT 158
Query: 175 LQRWTKGFSCSGVVGEDVVQGLKDAIAEEGM 267
L +WTK FS VGEDVV L+ A+ ++G+
Sbjct: 159 LVKWTKAFSIDDAVGEDVVAELQTAMVKQGL 189
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 291 LNDTTGTLMSCAWKNHNCKIGLIVGTGSNACYVEKTANCELFDGE-PDKEELL 446
+ND GTL + + + G+I GTG+NA YVEK ++GE P+ +++
Sbjct: 215 INDAVGTLAGARYYDEDVVAGVIFGTGTNAAYVEKANAIPKWEGELPNSGDMI 267
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 536 NPGKQIQEKMISGMYLGEL 592
N G I EK+ SGMYLGE+
Sbjct: 262 NSGDMIYEKLTSGMYLGEI 280
>07_01_0702 +
5288588-5288889,5289257-5289407,5289543-5289725,
5290063-5290137,5290248-5290403,5290502-5290597,
5290855-5290985,5291057-5291138,5291237-5291586,
5293029-5293234,5293254-5293570
Length = 682
Score = 72.5 bits (170), Expect = 3e-13
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Frame = +1
Query: 10 AIPKHIMTGTGIALFDHIAECLANFM-----KEHGVYEERLALGFTFSFPLKQLGLTKGV 174
+IP+ IM G LFD IA L+ F+ K H + LGFTFSFP+ Q + G+
Sbjct: 140 SIPREIMHGITEDLFDFIASGLSRFVATEGDKFHLPQGRKRELGFTFSFPVNQTSIDSGI 199
Query: 175 LQRWTKGFSCSGVVGEDVVQGLKDAIAEEGM 267
L +WTKGF+ SG G+DVV L A+ +G+
Sbjct: 200 LIKWTKGFAVSGTAGKDVVACLNAAMERQGL 230
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/57 (56%), Positives = 36/57 (63%)
Frame = +2
Query: 470 WG*RQPRLRADRVDREVDVTSINPGKQIQEKMISGMYLGELVRLALVKFTRMGLLFG 640
WG L DRE+D SINPG+QI EK ISGMYLGE+VR LVK + LFG
Sbjct: 295 WGAFSDGLPLTEFDREMDDESINPGEQIFEKTISGMYLGEIVRRVLVKMAEVSDLFG 351
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +3
Query: 279 ICAILNDTTGTLMSCAWKNHNCKIGLIVGTGSNACYVEKT-ANCELFDGEPDKEELLINT 455
+ A++NDT GTL + + + + +I+GTG+NACY+++T A +L + + +INT
Sbjct: 234 VSALVNDTVGTLAGARYWDDDVMVAVILGTGTNACYIQRTEAIPKLQHLKLETGNTIINT 293
Query: 456 EWGAFGD 476
EWGAF D
Sbjct: 294 EWGAFSD 300
>01_06_0546 +
30124693-30124970,30125711-30125861,30125955-30126137,
30126333-30126407,30126535-30126690,30126909-30127007,
30127075-30127205,30127690-30127771,30127846-30128199
Length = 502
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Frame = +1
Query: 10 AIPKHIMTGTGIALFDHIAECLANFMKEHGV-----YEERLALGFTFSFPLKQLGLTKGV 174
+IP+H+M+ + LFD +A LA F+ G + LGFTFSFP+KQ L G
Sbjct: 132 SIPQHLMSSSSHELFDFVAVALAKFVASEGEDCHLPEGTQRELGFTFSFPVKQKSLASGT 191
Query: 175 LQRWTKGFSCSGVVGEDVVQGLKDAIAEEGM 267
L +WTK F+ +VG+DVV L AI +G+
Sbjct: 192 LIKWTKSFAIDEMVGKDVVAELNMAIRSQGL 222
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 470 WG*-RQPRLRADRVDREVDVTSINPGKQIQEKMISGMYLGELVRLALVKFTRMGLLFG 640
WG + L D+E+D S+NPGKQ+ EK ISGMY+GELVR L+K + +FG
Sbjct: 287 WGNFKSSHLPLTEFDQELDAESLNPGKQVYEKSISGMYMGELVRRILLKMAQETRIFG 344
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +3
Query: 267 VQIDICAILNDTTGTLMSCAWKNHNCKIGLIVGTGSNACYVEKTANCELFDGE-PDKEEL 443
+ + + A++NDT GTL + + NH+ +I+GTGSNA Y++ + G P +
Sbjct: 222 LDMKVTALVNDTVGTLAAGRYVNHDTIAAVILGTGSNAAYIDHADAIPKWHGSLPKSGNM 281
Query: 444 LINTEWGAF 470
+IN EWG F
Sbjct: 282 VINMEWGNF 290
>07_03_0211 + 15239636-15241132
Length = 498
Score = 69.3 bits (162), Expect = 3e-12
Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Frame = +1
Query: 13 IPKHIMTGTGIA---LFDHIAECLANFM----KEHGVYEERLALGFTFSFPLKQLGLTKG 171
IP +M+G G LF IA LA F+ +E G+ LGFTFSFP+ Q + G
Sbjct: 134 IPPGLMSGGGATSECLFGFIASALAEFVGEEEEEGGLDGGERELGFTFSFPVHQTSIASG 193
Query: 172 VLQRWTKGFSCSGVVGEDVVQGLKDAIAEEGM 267
L RWTK F+ +GEDVV L+ A++E G+
Sbjct: 194 TLIRWTKAFAVDDAIGEDVVAALQAAMSERGL 225
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +3
Query: 279 ICAILNDTTGTLMSCAWKNHNCKIGLIVGTGSNACYVE-KTANCELFDGE-PDKEELLIN 452
+ A++NDT GTL + ++ + + +I+GTG+NA YVE TA +L + P ++IN
Sbjct: 229 VSALINDTVGTLAAGSYYDEDVVAAVILGTGTNAAYVEDATAIAKLHPSQLPASNTMVIN 288
Query: 453 TEWGAF 470
TEWG+F
Sbjct: 289 TEWGSF 294
Score = 54.4 bits (125), Expect = 8e-08
Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +2
Query: 470 WG*-RQPRLRADRVDREVDVTSINPGKQIQEKMISGMYLGELVRLALVKF-TRMGLLFGG 643
WG P L D +D S+NPG+Q EK+ISGMYLGE+VR L+K +R L GG
Sbjct: 291 WGSFASPCLPLTEFDEALDQESLNPGEQTYEKLISGMYLGEIVRRVLLKISSRCPSLLGG 350
Query: 644 QG 649
G
Sbjct: 351 AG 352
>01_07_0132 -
41298184-41298558,41298648-41298729,41298850-41298977,
41299059-41299157,41299279-41299434,41300709-41300783,
41301962-41302137,41303210-41303252,41303336-41303503,
41303584-41303731,41306316-41306587
Length = 573
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +1
Query: 13 IPKHIMTGTGIALFDHIAECLANFMKEHGVYEERLALGFTFSFPLKQLGLTKGVLQRWTK 192
IP+ + GT LF+ +A L NF++ + ++ALGFTFSFP++Q+ ++ G L RWTK
Sbjct: 130 IPEELTKGTTEGLFNFVALALKNFLEGEDDQDGKMALGFTFSFPVRQISVSSGSLIRWTK 189
Query: 193 GFS 201
GFS
Sbjct: 190 GFS 192
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +3
Query: 267 VQIDICAILNDTTGTLMSCAWKNHNCKIGLIVGTGSNACYVEKTANCELFDG-EPDKEEL 443
+ + + A++NDT GTL + + + +I+G+G+NACY+E+T G + +
Sbjct: 287 LNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTDAIIKCQGLLTNSGGM 346
Query: 444 LINTEWGAF 470
++N EWG F
Sbjct: 347 VVNMEWGNF 355
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = +2
Query: 461 GGVWG*RQPRLRADRVDREVDVTSINPGKQIQEKMISGMYLGELVRLALVKFTRMGLLFG 640
G W PR D + +D + N Q EKMISGMYLGE+ RL + + +FG
Sbjct: 353 GNFWSSHLPRTPYDIL---LDDETHNRNDQGFEKMISGMYLGEIARLVFHRMAQESDVFG 409
Query: 641 GQGSDL 658
L
Sbjct: 410 DAADSL 415
>07_03_1468 - 26739872-26740912
Length = 346
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 227 TSSPTTPEQEKPLVHLCNTPFVRPSCFSGK 138
T++ TT + P+VHL ++P CFSG+
Sbjct: 185 TATTTTTTTDNPVVHLAGVILIQP-CFSGE 213
>08_02_1177 + 24946763-24947275
Length = 170
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -1
Query: 329 PCAGHQCTRCIIQNSAYVNLYIPSSAIASLRPCTTSSPTTPEQEKP 192
P + C C + SA SS+ A+ P TTS P P EKP
Sbjct: 32 PATNNLCQNCFLAASAS-----SSSSSAAASPSTTSLPVFPVVEKP 72
>09_04_0021 -
13861369-13861538,13862274-13862432,13862493-13862720,
13864057-13864246
Length = 248
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 455 RVGGVWG*RQPRLRADRVDREVDVTSINPGKQIQEKMISGMYLGEL 592
R GG+W R+P+L+ R+ S PG Q Q K ++ L EL
Sbjct: 160 RRGGLWKPREPKLKKQRIRNMRKTESSCPGCQ-QVKELAQAKLAEL 204
>06_01_0652 - 4715017-4715122,4715278-4715402,4715524-4715676
Length = 127
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 319 PAHGKTTTAK*DSSLVLAATLVTSRKQRIVSCSMANLTKRNCSLIPSGGRLGMTAASTSC 498
PAHG T++++ + A V + R + C + + C G RLGM +C
Sbjct: 31 PAHGGTSSSQLSIAAATANKKVFEDQLRGIVCYRDDKGEMVCEGYDEGPRLGMRLPEKAC 90
Query: 499 GP 504
P
Sbjct: 91 FP 92
>10_08_0036 + 14325793-14326457,14326610-14328035
Length = 696
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 127 IQVPIFLHKLRAPS*NLLNIRLCGQIEQ 44
+++P FLH+LR L +IR+ GQ+ Q
Sbjct: 339 LELPTFLHQLRLNFPRLYDIRVLGQLVQ 366
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,872,148
Number of Sequences: 37544
Number of extensions: 430938
Number of successful extensions: 1181
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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