Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20533
(683 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 123 5e-27
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 122 1e-26
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 121 2e-26
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 120 3e-26
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 119 6e-26
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 119 8e-26
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 119 8e-26
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 118 1e-25
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 113 4e-24
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 112 7e-24
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 110 3e-23
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 109 5e-23
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 108 1e-22
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 106 4e-22
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 106 6e-22
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 105 1e-21
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 104 2e-21
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 103 5e-21
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 101 2e-20
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 99 9e-20
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 99 9e-20
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 99 9e-20
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 97 3e-19
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 96 6e-19
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 96 8e-19
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 93 6e-18
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 92 1e-17
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 88 2e-16
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 87 3e-16
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 87 4e-16
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 87 5e-16
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 86 7e-16
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 85 1e-15
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 85 2e-15
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 85 2e-15
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 84 3e-15
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 82 1e-14
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 82 1e-14
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 81 3e-14
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 79 8e-14
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 79 1e-13
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 79 1e-13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 79 1e-13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 79 1e-13
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 78 2e-13
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 78 2e-13
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 75 2e-12
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 75 2e-12
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 74 3e-12
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 74 3e-12
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 73 5e-12
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 73 5e-12
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 73 7e-12
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 73 9e-12
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 72 2e-11
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 71 2e-11
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 71 2e-11
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 71 2e-11
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 71 2e-11
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 71 3e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 71 3e-11
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 71 3e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 70 5e-11
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 69 8e-11
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 69 1e-10
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 69 1e-10
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 68 2e-10
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 68 2e-10
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 67 3e-10
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 67 4e-10
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 67 4e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 66 6e-10
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 66 8e-10
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 66 1e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 65 1e-09
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 64 3e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 64 3e-09
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 64 3e-09
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 64 4e-09
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 64 4e-09
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 63 5e-09
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 63 5e-09
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 63 5e-09
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 63 5e-09
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 62 1e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 62 2e-08
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 60 4e-08
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 58 2e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 57 5e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 8e-07
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 55 2e-06
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 53 6e-06
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 52 1e-05
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 49 1e-04
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 49 1e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 46 9e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 42 0.014
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 41 0.032
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 39 0.099
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.53
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 36 0.70
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 36 0.70
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 36 1.2
UniRef50_Q60AP6 Cluster: Putative membrane protein; n=1; Methylo... 35 1.6
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 35 1.6
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 3.7
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 123 bits (296), Expect = 5e-27
Identities = 54/66 (81%), Positives = 62/66 (93%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
+I +++ PVLAGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 176 AILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGF 235
Query: 665 GIISHI 682
GIISH+
Sbjct: 236 GIISHM 241
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G S+ L+IR ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+
Sbjct: 14 GFSMSLIIRLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGS 73
Query: 181 PDIAFPRINNIRF 219
PD++FPR+NN+ F
Sbjct: 74 PDMSFPRMNNMSF 86
Score = 62.1 bits (144), Expect = 1e-08
Identities = 39/96 (40%), Positives = 50/96 (52%)
Frame = +3
Query: 201 NK*YKILTPTPLPYIINFRRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 380
N + +L P+ L I++ + G GTG TVYPPLS + H G SVDL IFSLHLAG S
Sbjct: 83 NMSFWLLIPSLLLLILSM--FINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGAS 140
Query: 381 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 488
S + D++ LF +V ITA
Sbjct: 141 SIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITA 176
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 122 bits (293), Expect = 1e-26
Identities = 55/65 (84%), Positives = 62/65 (95%), Gaps = 1/65 (1%)
Frame = +2
Query: 491 FIIIIT-PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 667
F+++++ PVLAGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG
Sbjct: 196 FLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFG 255
Query: 668 IISHI 682
IISHI
Sbjct: 256 IISHI 260
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/77 (48%), Positives = 47/77 (61%)
Frame = +3
Query: 261 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 440
+VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 120 LVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGM 179
Query: 441 SFDQLPLFV*AVGITAF 491
+ +LPLFV +V +TAF
Sbjct: 180 TMHRLPLFVWSVLVTAF 196
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
GT +LIR EL PG I G+ Q+YN ++TAHA N VP+++
Sbjct: 31 GTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILI 90
Query: 175 GAPDIAFPRINNIRF 219
GAPD+AFPR+NNI F
Sbjct: 91 GAPDMAFPRLNNISF 105
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 121 bits (291), Expect = 2e-26
Identities = 52/66 (78%), Positives = 61/66 (92%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
+I +++ PVLAGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGF
Sbjct: 192 AILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGF 251
Query: 665 GIISHI 682
G++SHI
Sbjct: 252 GMVSHI 257
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/75 (52%), Positives = 45/75 (60%)
Frame = +3
Query: 264 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 443
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 444 FDQLPLFV*AVGITA 488
+LPLFV A+ +TA
Sbjct: 178 LHKLPLFVWAIFVTA 192
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
GT+ +LIR EL PG L GD Q+YN I+TAHA N LVP+++
Sbjct: 28 GTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMI 87
Query: 175 GAPDIAFPRINNIRF 219
GAPD+AFPR+NNI F
Sbjct: 88 GAPDMAFPRLNNISF 102
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 120 bits (289), Expect = 3e-26
Identities = 52/66 (78%), Positives = 60/66 (90%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
++ +++ PVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 192 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 251
Query: 665 GIISHI 682
GIISH+
Sbjct: 252 GIISHV 257
Score = 87.0 bits (206), Expect = 4e-16
Identities = 42/73 (57%), Positives = 50/73 (68%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL++GA
Sbjct: 30 GTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGA 89
Query: 181 PDIAFPRINNIRF 219
PD+AFPR+NN+ F
Sbjct: 90 PDMAFPRMNNMSF 102
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/75 (54%), Positives = 45/75 (60%)
Frame = +3
Query: 264 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 443
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 444 FDQLPLFV*AVGITA 488
Q PLFV AV +TA
Sbjct: 178 QYQTPLFVWAVLVTA 192
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 119 bits (287), Expect = 6e-26
Identities = 52/66 (78%), Positives = 60/66 (90%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
++ +++ PVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 192 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 251
Query: 665 GIISHI 682
G+ISHI
Sbjct: 252 GMISHI 257
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/73 (56%), Positives = 50/73 (68%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
GT+L LLIRAELG PG+L+G+D IYN IVTAHA N LVPL++GA
Sbjct: 30 GTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGA 89
Query: 181 PDIAFPRINNIRF 219
PD+AFPR+NN+ F
Sbjct: 90 PDMAFPRMNNMSF 102
Score = 69.7 bits (163), Expect = 6e-11
Identities = 39/76 (51%), Positives = 45/76 (59%)
Frame = +3
Query: 261 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 440
+VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 117 MVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAM 176
Query: 441 SFDQLPLFV*AVGITA 488
+ Q PLFV +V ITA
Sbjct: 177 TQYQTPLFVWSVLITA 192
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 119 bits (286), Expect = 8e-26
Identities = 51/66 (77%), Positives = 60/66 (90%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
++ +++ PVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 193 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 252
Query: 665 GIISHI 682
G+ISH+
Sbjct: 253 GMISHV 258
Score = 89.4 bits (212), Expect = 7e-17
Identities = 43/73 (58%), Positives = 51/73 (69%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
GT+L LLIRAELG PG+L+GDDQIYN IVTAHA N LVPL++GA
Sbjct: 31 GTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGA 90
Query: 181 PDIAFPRINNIRF 219
PD+AFPR+NN+ F
Sbjct: 91 PDMAFPRMNNMSF 103
Score = 75.4 bits (177), Expect = 1e-12
Identities = 43/75 (57%), Positives = 46/75 (61%)
Frame = +3
Query: 264 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 443
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS S
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 444 FDQLPLFV*AVGITA 488
Q PLFV +V ITA
Sbjct: 179 QYQTPLFVWSVLITA 193
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 119 bits (286), Expect = 8e-26
Identities = 51/66 (77%), Positives = 60/66 (90%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
++ +++ PVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 192 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 251
Query: 665 GIISHI 682
G+ISH+
Sbjct: 252 GMISHV 257
Score = 87.0 bits (206), Expect = 4e-16
Identities = 42/73 (57%), Positives = 50/73 (68%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL++GA
Sbjct: 30 GTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGA 89
Query: 181 PDIAFPRINNIRF 219
PD+AFPR+NN+ F
Sbjct: 90 PDMAFPRMNNMSF 102
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/75 (52%), Positives = 45/75 (60%)
Frame = +3
Query: 264 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 443
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 444 FDQLPLFV*AVGITA 488
Q PLFV +V +TA
Sbjct: 178 QYQTPLFVWSVLVTA 192
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 118 bits (284), Expect = 1e-25
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
+ +++ PVLAGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 200 AFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGF 259
Query: 665 GIISHI 682
G+ISHI
Sbjct: 260 GMISHI 265
Score = 66.9 bits (156), Expect = 4e-10
Identities = 36/77 (46%), Positives = 46/77 (59%)
Frame = +3
Query: 261 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 440
+VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 125 LVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQ 184
Query: 441 SFDQLPLFV*AVGITAF 491
S ++PLFV ++ +TAF
Sbjct: 185 SMYRIPLFVWSILVTAF 201
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
G + +LIR EL P + L+G+ QIYN ++TAHA N LVP+++
Sbjct: 36 GGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMI 95
Query: 175 GAPDIAFPRINNIRF 219
G+PD+AFPR+NNI F
Sbjct: 96 GSPDMAFPRLNNISF 110
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 113 bits (272), Expect = 4e-24
Identities = 49/66 (74%), Positives = 56/66 (84%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
S +I+ PVLA AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGF
Sbjct: 196 SFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGF 255
Query: 665 GIISHI 682
G++SHI
Sbjct: 256 GLVSHI 261
Score = 62.5 bits (145), Expect = 9e-09
Identities = 35/75 (46%), Positives = 39/75 (52%)
Frame = +3
Query: 267 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSF 446
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFN 182
Query: 447 DQLPLFV*AVGITAF 491
LPLFV +V +T+F
Sbjct: 183 KDLPLFVWSVAVTSF 197
Score = 53.2 bits (122), Expect = 6e-06
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 10 LRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 183
L +L+R EL PG L G+ YN I T H N VP+++GAP
Sbjct: 35 LSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAP 94
Query: 184 DIAFPRINNIRF 219
D++FPR+NN F
Sbjct: 95 DMSFPRLNNFSF 106
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 112 bits (270), Expect = 7e-24
Identities = 48/63 (76%), Positives = 57/63 (90%)
Frame = +2
Query: 494 IIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 673
+++ PVLAGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+I
Sbjct: 301 LLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVI 360
Query: 674 SHI 682
SHI
Sbjct: 361 SHI 363
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +3
Query: 261 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 440
+++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGM 282
Query: 441 SFDQLPLFV*AVGITAF 491
+ ++PLF +V +TA+
Sbjct: 283 TLHKVPLFAWSVFVTAW 299
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 25 RAELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 198
+A LG L G D ++N ++T H N +PL++GAPD+AFP
Sbjct: 142 QALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
Query: 199 RINNIRF 219
R+NN+ +
Sbjct: 202 RLNNLSY 208
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 110 bits (265), Expect = 3e-23
Identities = 48/64 (75%), Positives = 57/64 (89%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
++ +++ PVLAG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGF
Sbjct: 193 AVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGF 252
Query: 665 GIIS 676
GIIS
Sbjct: 253 GIIS 256
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 177
GT+ +LIR EL PG I D+Q+YN+I+TAHA N L+PL LG
Sbjct: 30 GTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLG 89
Query: 178 APDIAFPRINNIRF 219
PD+ FPR+NNI +
Sbjct: 90 GPDMGFPRLNNISY 103
Score = 64.5 bits (150), Expect = 2e-09
Identities = 40/93 (43%), Positives = 50/93 (53%)
Frame = +3
Query: 210 YKILTPTPLPYIINFRRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 389
Y +L P+ + ++ F +ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 103 YLLLIPSIVLFL--FAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLL 160
Query: 390 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 488
+L LF AV ITA
Sbjct: 161 GAMNFMTTTFNMRSPGIRLHKLILFAWAVVITA 193
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 109 bits (263), Expect = 5e-23
Identities = 46/66 (69%), Positives = 57/66 (86%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
S+ +++ PVLA IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGF
Sbjct: 282 SVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGF 341
Query: 665 GIISHI 682
GI+SHI
Sbjct: 342 GIVSHI 347
Score = 39.5 bits (88), Expect = 0.075
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +3
Query: 234 LPYIINFRRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 383
+P I + G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 204 VPSIFYMELSLYYGCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G L LLIR L +P + +YN +VT H N +P+ L
Sbjct: 128 GLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLCL 187
Query: 181 PDIAFPRINNI 213
D+ PR+N++
Sbjct: 188 DDLLLPRLNSL 198
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 108 bits (259), Expect = 1e-22
Identities = 48/66 (72%), Positives = 58/66 (87%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
++ +++ PVLA AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGF
Sbjct: 219 AVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGF 278
Query: 665 GIISHI 682
GIIS +
Sbjct: 279 GIISTV 284
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 177
GT+ +LIR EL PG I D+Q+YN+I+T+H N L+P+++G
Sbjct: 56 GTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIG 115
Query: 178 APDIAFPRINNIRF 219
PD+AFPR+NN+ +
Sbjct: 116 GPDMAFPRLNNVSY 129
Score = 62.5 bits (145), Expect = 9e-09
Identities = 36/86 (41%), Positives = 43/86 (50%)
Frame = +3
Query: 231 PLPYIINFRRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXX 410
P ++ F I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 134 PSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIA 193
Query: 411 XXXXXXXXXXSFDQLPLFV*AVGITA 488
+L LF AV ITA
Sbjct: 194 TLLNMRSPGIKLHKLALFGWAVVITA 219
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 106 bits (255), Expect = 4e-22
Identities = 46/65 (70%), Positives = 58/65 (89%), Gaps = 1/65 (1%)
Frame = +2
Query: 491 FIIIIT-PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 667
F+++++ PVL+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFG
Sbjct: 194 FLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFG 253
Query: 668 IISHI 682
IISH+
Sbjct: 254 IISHV 258
Score = 72.5 bits (170), Expect = 9e-12
Identities = 40/77 (51%), Positives = 47/77 (61%)
Frame = +3
Query: 261 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 440
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 441 SFDQLPLFV*AVGITAF 491
+ +LPLFV ++ ITAF
Sbjct: 178 TMHKLPLFVWSIFITAF 194
Score = 62.5 bits (145), Expect = 9e-09
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
GT++ L+IR EL PGS L G+ Q++N +V HA N L+PL++
Sbjct: 29 GTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMI 88
Query: 175 GAPDIAFPRINNIRF 219
GA D AFPRINNI F
Sbjct: 89 GATDTAFPRINNIAF 103
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 106 bits (254), Expect = 6e-22
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
+ +++ PVLA AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGF
Sbjct: 235 AFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGF 294
Query: 665 GIISHI 682
GIIS I
Sbjct: 295 GIISQI 300
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/74 (43%), Positives = 42/74 (56%)
Frame = +3
Query: 270 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 449
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 450 QLPLFV*AVGITAF 491
++PLFV +V +TAF
Sbjct: 223 KMPLFVWSVLVTAF 236
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +1
Query: 70 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 219
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 105 bits (252), Expect = 1e-21
Identities = 46/65 (70%), Positives = 56/65 (86%), Gaps = 1/65 (1%)
Frame = +2
Query: 491 FIIIIT-PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 667
F+++++ PVL+ IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFG
Sbjct: 194 FLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFG 253
Query: 668 IISHI 682
I+SHI
Sbjct: 254 IVSHI 258
Score = 75.4 bits (177), Expect = 1e-12
Identities = 42/77 (54%), Positives = 47/77 (61%)
Frame = +3
Query: 261 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 440
+VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 441 SFDQLPLFV*AVGITAF 491
S ++PLFV A+ ITAF
Sbjct: 178 SMHKMPLFVWAIFITAF 194
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
G+++ ++IR EL PGS L G+ Q++N +V HA N ++PL++
Sbjct: 29 GSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMI 88
Query: 175 GAPDIAFPRINNIRF 219
GA D++FPRIN+I F
Sbjct: 89 GATDMSFPRINSIGF 103
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 104 bits (249), Expect = 2e-21
Identities = 46/56 (82%), Positives = 52/56 (92%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 652
++ +++ PVLAGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 165 ALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
Score = 97.5 bits (232), Expect = 3e-19
Identities = 55/90 (61%), Positives = 59/90 (65%)
Frame = +3
Query: 219 LTPTPLPYIINFRRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 398
L P L +I+ IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 77 LLPPSLILLIS-SSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAI 135
Query: 399 XXXXXXXXXXXXXXSFDQLPLFV*AVGITA 488
SFDQ+PLF+ AVGITA
Sbjct: 136 NFITTIINMRINKMSFDQMPLFIWAVGITA 165
Score = 93.5 bits (222), Expect = 4e-18
Identities = 46/73 (63%), Positives = 51/73 (69%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
GTSL LLIR ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGA
Sbjct: 3 GTSLSLLIRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGA 62
Query: 181 PDIAFPRINNIRF 219
PD+AFPR+NN+ F
Sbjct: 63 PDMAFPRMNNMSF 75
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 103 bits (246), Expect = 5e-21
Identities = 45/66 (68%), Positives = 54/66 (81%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
SI ++ PVLA +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP F
Sbjct: 195 SILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAF 254
Query: 665 GIISHI 682
G+ISHI
Sbjct: 255 GVISHI 260
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 273 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 383
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 42.3 bits (95), Expect = 0.011
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G SL +R EL +PG + +Y++I+T HA N +PL++
Sbjct: 32 GLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKI 91
Query: 181 PDIAFPRINNI 213
D++ PR+NN+
Sbjct: 92 KDLSMPRLNNL 102
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 101 bits (241), Expect = 2e-20
Identities = 57/91 (62%), Positives = 60/91 (65%)
Frame = +3
Query: 219 LTPTPLPYIINFRRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 398
L P L +I+ IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 101 LLPPSLTLLIS-SSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAI 159
Query: 399 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 491
SFDQ+PLFV AVGITAF
Sbjct: 160 NFITTIINMRMNNLSFDQMPLFVWAVGITAF 190
Score = 95.5 bits (227), Expect = 1e-18
Identities = 48/73 (65%), Positives = 52/73 (71%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
GTSL LLIRAELG PGSLIGDDQIYNTIVTAHA N LVPL+LGA
Sbjct: 27 GTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGA 86
Query: 181 PDIAFPRINNIRF 219
PD+AFPR+NN+ F
Sbjct: 87 PDMAFPRMNNMSF 99
Score = 93.1 bits (221), Expect = 6e-18
Identities = 41/51 (80%), Positives = 49/51 (96%), Gaps = 1/51 (1%)
Frame = +2
Query: 491 FIIIIT-PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 640
F+++++ PVLAGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 190 FLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 99.1 bits (236), Expect = 9e-20
Identities = 42/66 (63%), Positives = 54/66 (81%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
++ II+ PVLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P F
Sbjct: 210 AVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVF 269
Query: 665 GIISHI 682
G++S I
Sbjct: 270 GVVSQI 275
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/93 (36%), Positives = 55/93 (59%)
Frame = +3
Query: 210 YKILTPTPLPYIINFRRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 389
+ +L P+ L +++ +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 120 FVVLLPSMLFAVLSC--LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIF 177
Query: 390 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 488
+ +LPLFV +V ITA
Sbjct: 178 GAINLMVTIINMRANGMDYSKLPLFVWSVLITA 210
Score = 56.0 bits (129), Expect = 8e-07
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
G SL +L+R EL NP L+ + Q++N ++TAHA N LVPL +
Sbjct: 46 GLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQI 105
Query: 175 GAPDIAFPRINNIRF 219
G+ D AFPRINN+ F
Sbjct: 106 GSNDTAFPRINNLAF 120
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 99.1 bits (236), Expect = 9e-20
Identities = 42/66 (63%), Positives = 54/66 (81%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
++ II+ PVLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P F
Sbjct: 210 AVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVF 269
Query: 665 GIISHI 682
G++S I
Sbjct: 270 GVVSQI 275
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/93 (36%), Positives = 55/93 (59%)
Frame = +3
Query: 210 YKILTPTPLPYIINFRRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 389
+ +L P+ L +++ +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 120 FVVLLPSMLFAVLSC--LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIF 177
Query: 390 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 488
+ +LPLFV +V ITA
Sbjct: 178 GAINLMVTIINMRANGMDYSKLPLFVWSVLITA 210
Score = 56.0 bits (129), Expect = 8e-07
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
G SL +L+R EL NP L+ + Q++N ++TAHA N LVPL +
Sbjct: 46 GLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQI 105
Query: 175 GAPDIAFPRINNIRF 219
G+ D AFPRINN+ F
Sbjct: 106 GSNDTAFPRINNLAF 120
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 99.1 bits (236), Expect = 9e-20
Identities = 43/66 (65%), Positives = 54/66 (81%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
+I +II PVLAG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP F
Sbjct: 195 AILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVF 254
Query: 665 GIISHI 682
G+IS I
Sbjct: 255 GLISTI 260
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 16 LLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 189
L IR EL G L GD Q YN ++T+H N +P++ G PD+
Sbjct: 36 LFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDM 95
Query: 190 AFPRINNIRF 219
FPR+NN+ F
Sbjct: 96 VFPRLNNMSF 105
Score = 39.1 bits (87), Expect = 0.099
Identities = 25/76 (32%), Positives = 32/76 (42%)
Frame = +3
Query: 261 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 440
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 120 LTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFF 179
Query: 441 SFDQLPLFV*AVGITA 488
SF LF+ A ITA
Sbjct: 180 SFLSWSLFIWAALITA 195
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 97.5 bits (232), Expect = 3e-19
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = +2
Query: 494 IIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 673
+++ PVL G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+I
Sbjct: 201 LLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVI 260
Query: 674 SHI 682
SH+
Sbjct: 261 SHV 263
Score = 37.1 bits (82), Expect = 0.40
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPG-SLIGDDQI--YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 171
G L +++R EL + +I + + YN I T H N +P++
Sbjct: 32 GFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPIL 91
Query: 172 LGAPDIAFPRINNI 213
G+P++A+PRIN+I
Sbjct: 92 CGSPELAYPRINSI 105
Score = 36.7 bits (81), Expect = 0.53
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 383
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 96.3 bits (229), Expect = 6e-19
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +2
Query: 527 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 676
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIIS 281
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 177
GT+ +LIR EL PG I ++Q+YN+I+TAHA N L+PL++G
Sbjct: 58 GTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIG 117
Query: 178 APDIAFPRINNIRF 219
PD+AFPR+NNI F
Sbjct: 118 GPDMAFPRLNNISF 131
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Frame = +3
Query: 231 PLPYIINFRRIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISS 383
P ++ F I+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 136 PSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 95.9 bits (228), Expect = 8e-19
Identities = 41/64 (64%), Positives = 51/64 (79%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
S +++ PVLAG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP F
Sbjct: 202 SFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVF 261
Query: 665 GIIS 676
GIIS
Sbjct: 262 GIIS 265
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
G+ L +LIR EL +PG G Q+YN+++T H N ++PL+L
Sbjct: 39 GSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLML 98
Query: 175 GAPDIAFPRINNIRF 219
GAP++AFPR+N + F
Sbjct: 99 GAPEMAFPRVNALSF 113
Score = 33.1 bits (72), Expect = 6.5
Identities = 22/76 (28%), Positives = 30/76 (39%)
Frame = +3
Query: 264 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 443
+ G G+ T YPPLS S+D I LH GI S +
Sbjct: 129 IGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVT 187
Query: 444 FDQLPLFV*AVGITAF 491
DQ+ +FV +T+F
Sbjct: 188 LDQISMFVWTSYLTSF 203
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 93.1 bits (221), Expect = 6e-18
Identities = 49/82 (59%), Positives = 58/82 (70%)
Frame = -1
Query: 248 NNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I 69
+ ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I
Sbjct: 123 SKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-I 181
Query: 68 *SSPINDPGFPNSARIKSLKDV 3
S PI PG PNSARIKSL DV
Sbjct: 182 WSFPIKLPGCPNSARIKSLSDV 203
Score = 64.1 bits (149), Expect = 3e-09
Identities = 39/78 (50%), Positives = 42/78 (53%)
Frame = -2
Query: 487 AVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDE 308
AV T TN G S I +R I+E PAKC+EKI STD P CAI
Sbjct: 43 AVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLA 102
Query: 307 SGG*TVHPVPAPFSTILL 254
SGG TVHPVP P STI L
Sbjct: 103 SGGYTVHPVPTPLSTIPL 120
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = -3
Query: 615 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTG 508
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TG
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTG 35
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 92.3 bits (219), Expect = 1e-17
Identities = 40/71 (56%), Positives = 53/71 (74%)
Frame = +2
Query: 464 CMSCRDYSIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 643
C S S+ +++ PVLA IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY
Sbjct: 169 CWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVY 228
Query: 644 ILILPGFGIIS 676
++ILP FG+ S
Sbjct: 229 VVILPVFGLFS 239
Score = 41.5 bits (93), Expect = 0.019
Identities = 24/73 (32%), Positives = 30/73 (41%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G S LL R +L P L D +YN VT H N L+P
Sbjct: 27 GMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNL 84
Query: 181 PDIAFPRINNIRF 219
PD+ FPR+N + F
Sbjct: 85 PDLLFPRMNALSF 97
Score = 36.7 bits (81), Expect = 0.53
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 276 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 383
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 88.2 bits (209), Expect = 2e-16
Identities = 39/73 (53%), Positives = 51/73 (69%)
Frame = +2
Query: 464 CMSCRDYSIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 643
C + S I++ TPVLA A+ +L D TSFF+P GGGDP++YQHLF F+ HP VY
Sbjct: 196 CWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVY 255
Query: 644 ILILPGFGIISHI 682
I+ILP FG+IS +
Sbjct: 256 IMILPFFGVISEV 268
Score = 39.9 bits (89), Expect = 0.056
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G S +R EL P ++YN ++T H N L+PL++G
Sbjct: 45 GGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGT 103
Query: 181 PDIAFPRINNIRF 219
D+AFPR+N + F
Sbjct: 104 EDMAFPRLNAVAF 116
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 87.4 bits (207), Expect = 3e-16
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 631
+I +++ PVLAGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 111 AILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 72.9 bits (171), Expect = 7e-12
Identities = 40/75 (53%), Positives = 46/75 (61%)
Frame = +3
Query: 264 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 443
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 444 FDQLPLFV*AVGITA 488
++PLFV AV ITA
Sbjct: 97 PXRMPLFVWAVEITA 111
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 87.0 bits (206), Expect = 4e-16
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
S +++ PV+ ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGF
Sbjct: 198 SFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGF 257
Query: 665 GIIS 676
GIIS
Sbjct: 258 GIIS 261
Score = 41.5 bits (93), Expect = 0.019
Identities = 22/52 (42%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +3
Query: 231 PLPYIINFRRI-VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 383
P+ +++ I +E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 114 PIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
Score = 35.9 bits (79), Expect = 0.92
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPG-SLIGDD--QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 171
G + +LIR EL G +I D +IYN + T H N L P++
Sbjct: 35 GFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVL 94
Query: 172 LGAPDIAFPRIN 207
LG D+ +PR+N
Sbjct: 95 LGYCDVVYPRVN 106
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 86.6 bits (205), Expect = 5e-16
Identities = 41/73 (56%), Positives = 50/73 (68%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N L+PL++GA
Sbjct: 19 GTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGA 78
Query: 181 PDIAFPRINNIRF 219
PD+AFPR+NN+ F
Sbjct: 79 PDMAFPRMNNMSF 91
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/75 (56%), Positives = 45/75 (60%)
Frame = +3
Query: 264 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 443
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS S
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAIS 166
Query: 444 FDQLPLFV*AVGITA 488
Q PLFV AV ITA
Sbjct: 167 QYQTPLFVWAVLITA 181
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDP 577
++ +++ PVLA IT+LLTDRNLNT+FFDP
Sbjct: 181 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 86.2 bits (204), Expect = 7e-16
Identities = 41/73 (56%), Positives = 49/73 (67%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
GT+L LLIR ELG PGS IG+DQ+YN +VTAHA N LVPL+LGA
Sbjct: 13 GTALSLLIRVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGA 72
Query: 181 PDIAFPRINNIRF 219
PD+AFPR+NN+ F
Sbjct: 73 PDMAFPRLNNMSF 85
Score = 80.6 bits (190), Expect = 3e-14
Identities = 35/44 (79%), Positives = 40/44 (90%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 616
+I +++ PVLAGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 175 AILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 72.9 bits (171), Expect = 7e-12
Identities = 40/75 (53%), Positives = 45/75 (60%)
Frame = +3
Query: 264 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 443
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMK 160
Query: 444 FDQLPLFV*AVGITA 488
+ + LFV +V ITA
Sbjct: 161 IELVSLFVWSVKITA 175
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
+I II+ P L A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGF
Sbjct: 211 AILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGF 270
Query: 665 GIISHI 682
G+IS +
Sbjct: 271 GMISEV 276
Score = 39.1 bits (87), Expect = 0.099
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +1
Query: 16 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 195
LL+R +L P + +++N + T H N VPL++GA D+AF
Sbjct: 55 LLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAF 113
Query: 196 PRINNIRF 219
PR+N+ F
Sbjct: 114 PRLNSFGF 121
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 85.0 bits (201), Expect = 2e-15
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +2
Query: 551 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 682
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHV 234
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/73 (54%), Positives = 48/73 (65%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
GTSL L+IR ELG PGSL+ DDQ+YN +VTAH N LVPL+LGA
Sbjct: 14 GTSLSLMIRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGA 73
Query: 181 PDIAFPRINNIRF 219
PD+AFPR+NN+ F
Sbjct: 74 PDMAFPRMNNMSF 86
Score = 33.1 bits (72), Expect = 6.5
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 330 GRSVDLAIFSLHLAGISS 383
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 84.2 bits (199), Expect = 3e-15
Identities = 43/73 (58%), Positives = 51/73 (69%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
GT+L LLIRAELG PG+L+GDDQ N IVTAHA N LVPL++GA
Sbjct: 31 GTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGA 90
Query: 181 PDIAFPRINNIRF 219
PD+AFPR+NN+ F
Sbjct: 91 PDMAFPRMNNMSF 103
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 503 ITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 682
ITPVL A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I
Sbjct: 359 ITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMI 418
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
G +L +IR EL +P S GD Y +VTAH N L+P +
Sbjct: 78 GAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHV 137
Query: 175 GAPDIAFPRINNIRF 219
G+ D+A+PR+N+I F
Sbjct: 138 GSKDVAYPRLNSIGF 152
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 81.8 bits (193), Expect = 1e-14
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 628
+I +++ PVLAGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 193 AILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 80.6 bits (190), Expect = 3e-14
Identities = 37/73 (50%), Positives = 47/73 (64%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
GT+ +LIR EL +PGS++GDD +YN IVTAHA N VPL++GA
Sbjct: 31 GTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGA 90
Query: 181 PDIAFPRINNIRF 219
PD+AFPR+NNI F
Sbjct: 91 PDMAFPRLNNISF 103
Score = 72.5 bits (170), Expect = 9e-12
Identities = 40/86 (46%), Positives = 51/86 (59%)
Frame = +3
Query: 231 PLPYIINFRRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXX 410
P +++ +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 108 PALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFIT 167
Query: 411 XXXXXXXXXXSFDQLPLFV*AVGITA 488
+ ++PLFV +V ITA
Sbjct: 168 TVMNMRTPGMTMSRIPLFVWSVLITA 193
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/66 (59%), Positives = 49/66 (74%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
SI +I P+L AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP F
Sbjct: 204 SILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVF 261
Query: 665 GIISHI 682
G+ S I
Sbjct: 262 GLTSLI 267
Score = 37.5 bits (83), Expect = 0.30
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLI----GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 168
G + +LIR EL G I + IYN +T H N L+P+
Sbjct: 36 GYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPM 95
Query: 169 ILGAPDIAFPRINNIRF 219
++G +++ PR+N I F
Sbjct: 96 LIGTSELSMPRMNGISF 112
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 282 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 383
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 79.4 bits (187), Expect = 8e-14
Identities = 34/44 (77%), Positives = 40/44 (90%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 616
+I +++ PVLAGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 192 AILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/75 (52%), Positives = 45/75 (60%)
Frame = +3
Query: 264 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 443
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 444 FDQLPLFV*AVGITA 488
+LPLFV A+ +TA
Sbjct: 178 LHKLPLFVWAIFVTA 192
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
GT+ +LIR EL PG L GD Q+YN I+TAHA N LVP+++
Sbjct: 28 GTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMI 87
Query: 175 GAPDIAFPRINNIRF 219
GAPD+AFPR+NNI F
Sbjct: 88 GAPDMAFPRLNNISF 102
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +2
Query: 494 IIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 673
I+ P+L AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GII
Sbjct: 282 ILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGII 339
Query: 674 SHI 682
S+I
Sbjct: 340 SYI 342
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G + +L+R EL +PG + + YN+++T+H N L+PL++GA
Sbjct: 112 GGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGA 170
Query: 181 PDIAFPRINNIRF 219
D+AFPRIN I F
Sbjct: 171 DDMAFPRINAIAF 183
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
S +I+ P + A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP
Sbjct: 208 SFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAV 267
Query: 665 GIISHI 682
G++S I
Sbjct: 268 GMVSSI 273
Score = 35.9 bits (79), Expect = 0.92
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 177
G L LL+R +L P + IG D+ YN I T H LVPL++G
Sbjct: 47 GGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMVG 104
Query: 178 APDIAFPRIN 207
IAFPR+N
Sbjct: 105 TRHIAFPRLN 114
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 78.6 bits (185), Expect = 1e-13
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
++ ++ P LAGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP F
Sbjct: 148 NVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVF 207
Query: 665 GIISHI 682
G S I
Sbjct: 208 GFYSEI 213
Score = 41.1 bits (92), Expect = 0.024
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 43 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 207
PG + D + YN ++T H N L+PL++GA D+AFPR+N
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/63 (57%), Positives = 45/63 (71%)
Frame = +2
Query: 494 IIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 673
I+ P+ A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+
Sbjct: 250 ILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIV 308
Query: 674 SHI 682
S I
Sbjct: 309 SLI 311
Score = 39.9 bits (89), Expect = 0.056
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 16 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 195
LL+R EL + +YN ++T+H N +PL++ A D+AF
Sbjct: 91 LLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAF 149
Query: 196 PRINNIRF 219
PRIN I F
Sbjct: 150 PRINAIAF 157
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/62 (53%), Positives = 42/62 (67%)
Frame = +2
Query: 497 IIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 676
+I P L G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S
Sbjct: 222 LIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFS 281
Query: 677 HI 682
+
Sbjct: 282 EL 283
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G L +++R EL P + + D +YN + T H N L+P ++GA
Sbjct: 54 GGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGA 112
Query: 181 PDIAFPRINNIRF 219
PD+AFP++N F
Sbjct: 113 PDMAFPKLNAAAF 125
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/65 (61%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +2
Query: 491 FIIIIT-PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 667
FI+I PVL A LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP G
Sbjct: 211 FILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMG 270
Query: 668 IISHI 682
IIS +
Sbjct: 271 IISEV 275
Score = 39.9 bits (89), Expect = 0.056
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +1
Query: 16 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 195
LL+R +LG P + +YN + T H N +VPL++GA D+AF
Sbjct: 54 LLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAF 112
Query: 196 PRIN 207
PR+N
Sbjct: 113 PRLN 116
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 74.9 bits (176), Expect = 2e-12
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +2
Query: 497 IIITPVLAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 673
++ TPV+ G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG++
Sbjct: 222 VLATPVI-GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVM 280
Query: 674 SHI 682
S +
Sbjct: 281 SEV 283
Score = 49.2 bits (112), Expect = 9e-05
Identities = 27/69 (39%), Positives = 32/69 (46%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G LLIR EL PG I D YN T H N ++PL+LGA
Sbjct: 60 GGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGA 119
Query: 181 PDIAFPRIN 207
D+AFPR+N
Sbjct: 120 KDVAFPRLN 128
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 5/70 (7%)
Frame = +2
Query: 488 IFIIIITPVLAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILI 652
+ + + P+ AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+
Sbjct: 199 LMVTALPPLAAGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILV 257
Query: 653 LPGFGIISHI 682
LP G++S +
Sbjct: 258 LPAMGLVSEV 267
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYIL 649
+I + PVL A +LL DR+ T FF GGGDPIL+QHLF FGHPEVYI+
Sbjct: 225 AILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIM 284
Query: 650 ILPGFGIISHI 682
ILP +GI+ +
Sbjct: 285 ILPAWGILGDV 295
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 276 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 455
AG G T Y PLS+N+ G L + ++ + G+SS ++ +L
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRL 214
Query: 456 PLFV*AVGITA 488
PL + + +TA
Sbjct: 215 PLTIWGLWLTA 225
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 73 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 219
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/66 (53%), Positives = 45/66 (68%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
S+ ++I P+L A +L DR L +DPA GG +L+QHLF FFGHPEVY+L LP F
Sbjct: 218 SVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFF 276
Query: 665 GIISHI 682
GI+S I
Sbjct: 277 GIVSEI 282
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/73 (35%), Positives = 36/73 (49%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G + LLIRAEL PG ++ +N + T H N ++PL +GA
Sbjct: 56 GGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGA 114
Query: 181 PDIAFPRINNIRF 219
PD+AFPR+N F
Sbjct: 115 PDVAFPRLNAFGF 127
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 73.3 bits (172), Expect = 5e-12
Identities = 31/63 (49%), Positives = 44/63 (69%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
S+ +++ P A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P
Sbjct: 194 SLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAI 253
Query: 665 GII 673
G++
Sbjct: 254 GMM 256
Score = 39.5 bits (88), Expect = 0.075
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 177
G +L LLIRAEL PG+ I D +N + T H N VP+++
Sbjct: 38 GGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILPFASAVG-NYFVPIMVR 96
Query: 178 APDIAFPRINNIRF 219
D+A+P++N I F
Sbjct: 97 YKDMAYPKLNAIAF 110
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 73.3 bits (172), Expect = 5e-12
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
S I+ P L + +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP F
Sbjct: 201 SALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAF 260
Query: 665 GIISHI 682
GI S +
Sbjct: 261 GIFSEV 266
Score = 35.1 bits (77), Expect = 1.6
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 16 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 195
+ IR +L P + Q YN ++T H N +VPL +GA D++F
Sbjct: 47 MFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGARDVSF 105
Query: 196 PRINNIRF 219
P +N + F
Sbjct: 106 PFLNALGF 113
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/66 (50%), Positives = 42/66 (63%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
+I +II P L + +R T FFD A GG P+L+Q LF FFGHPEVYILILP
Sbjct: 190 AILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAM 249
Query: 665 GIISHI 682
G++S +
Sbjct: 250 GLVSEL 255
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 72.5 bits (170), Expect = 9e-12
Identities = 40/77 (51%), Positives = 47/77 (61%)
Frame = +3
Query: 261 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 440
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 441 SFDQLPLFV*AVGITAF 491
+ +LPLFV ++ ITAF
Sbjct: 178 TMHKLPLFVWSIFITAF 194
Score = 71.7 bits (168), Expect = 2e-11
Identities = 32/56 (57%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Frame = +2
Query: 491 FIIIIT-PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 655
F+++++ PVL+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 194 FLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
Score = 62.5 bits (145), Expect = 9e-09
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
GT++ L+IR EL PGS L G+ Q++N +V HA N L+PL++
Sbjct: 29 GTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMI 88
Query: 175 GAPDIAFPRINNIRF 219
GA D AFPRINNI F
Sbjct: 89 GATDTAFPRINNIAF 103
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 71.7 bits (168), Expect = 2e-11
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 628
++ +++ PVL+ +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 193 AVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 68.9 bits (161), Expect = 1e-10
Identities = 38/76 (50%), Positives = 46/76 (60%)
Frame = +3
Query: 261 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 440
+VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS
Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGM 177
Query: 441 SFDQLPLFV*AVGITA 488
+ +LPLFV A+ ITA
Sbjct: 178 TMHKLPLFVWAILITA 193
Score = 60.1 bits (139), Expect = 5e-08
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
GT++ L+IR EL PG L G++Q++N +V HA N ++PL++
Sbjct: 29 GTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMI 88
Query: 175 GAPDIAFPRINNIRF 219
GA D AFPRINNI F
Sbjct: 89 GATDTAFPRINNIGF 103
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 71.3 bits (167), Expect = 2e-11
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
S+ I+ TPVL ++ ++ + FDPA GGDP+L+QH F F+ HP VYI++LP
Sbjct: 211 SVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAM 270
Query: 665 GIISHI 682
+IS +
Sbjct: 271 AVISEV 276
Score = 49.2 bits (112), Expect = 9e-05
Identities = 26/73 (35%), Positives = 35/73 (47%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G LLIR EL PG I D YN + T H N L+P+++GA
Sbjct: 53 GGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGA 112
Query: 181 PDIAFPRINNIRF 219
D+AFP++N + F
Sbjct: 113 KDVAFPKLNLLSF 125
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 71.3 bits (167), Expect = 2e-11
Identities = 49/117 (41%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Frame = +3
Query: 138 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYI-INFRRIVENGAGTG*TVYPPLSS 314
W IWKL P NK YKILT PL Y IN R N + PL+S
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKR----NSS--------PLAS 75
Query: 315 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 485
+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV IT
Sbjct: 76 SIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFIT 132
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 655
+I +++ PVLA +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 198 AILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
GT L +IR EL N GS L G+ Q +N ++TAHA N L+PL+L
Sbjct: 34 GTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLML 93
Query: 175 GAPDIAFPRINNIRF 219
GA D+AF R+NNI F
Sbjct: 94 GASDMAFARLNNISF 108
Score = 60.1 bits (139), Expect = 5e-08
Identities = 34/76 (44%), Positives = 42/76 (55%)
Frame = +3
Query: 261 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 440
+VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 123 LVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGM 182
Query: 441 SFDQLPLFV*AVGITA 488
++ +PLF AV TA
Sbjct: 183 KYENVPLFAWAVLFTA 198
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/59 (54%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 655
++ II+ PVLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 210 AVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/93 (36%), Positives = 55/93 (59%)
Frame = +3
Query: 210 YKILTPTPLPYIINFRRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 389
+ +L P+ L +++ +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 120 FVVLLPSMLFAVLSC--LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIF 177
Query: 390 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 488
+ +LPLFV +V ITA
Sbjct: 178 GAINLMVTIINMRANGMDYSKLPLFVWSVLITA 210
Score = 56.0 bits (129), Expect = 8e-07
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
G SL +L+R EL NP L+ + Q++N ++TAHA N LVPL +
Sbjct: 46 GLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQI 105
Query: 175 GAPDIAFPRINNIRF 219
G+ D AFPRINN+ F
Sbjct: 106 GSNDTAFPRINNLAF 120
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = +1
Query: 550 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSY 681
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSY
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSY 50
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/75 (52%), Positives = 45/75 (60%)
Frame = +3
Query: 264 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 443
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 444 FDQLPLFV*AVGITA 488
+LPLFV A+ +TA
Sbjct: 178 LHKLPLFVWAIFVTA 192
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
GT+ +LIR EL PG L GD Q+YN I+TAHA N LVP+++
Sbjct: 28 GTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMI 87
Query: 175 GAPDIAFPRINNIRF 219
GAPD+AFPR+NNI F
Sbjct: 88 GAPDMAFPRLNNISF 102
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 10/76 (13%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHP 634
++ ++ P L +LL DR L TSFF P GGG P+L+QHLF FFGHP
Sbjct: 222 TVMALLAFPALFVGSVMLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHP 281
Query: 635 EVYILILPGFGIISHI 682
EVYI+ LP FGI+S +
Sbjct: 282 EVYIVALPAFGIVSDL 297
Score = 35.9 bits (79), Expect = 0.92
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 LRLLIRAELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 186
L L+R +LG PG+ D Y +T H N L+PL++GA D
Sbjct: 59 LSWLMRLQLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARD 118
Query: 187 IAFPRINNIRF 219
+ FP +N + +
Sbjct: 119 MVFPYVNMLSY 129
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/66 (50%), Positives = 41/66 (62%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
S II P + A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILILP
Sbjct: 212 SAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAM 271
Query: 665 GIISHI 682
GIIS +
Sbjct: 272 GIISEV 277
Score = 36.7 bits (81), Expect = 0.53
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 19 LIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 198
++R +L PG + + +N + T HA N +PL++GA D+AFP
Sbjct: 53 IMRLQLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFP 111
Query: 199 RIN 207
R+N
Sbjct: 112 RLN 114
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
GT+ +LIR EL PG L GD Q+YN I+TAHA N LVP+++
Sbjct: 28 GTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMI 87
Query: 175 GAPDIAFPRINNIRF 219
GAPD+AFPR+NNI F
Sbjct: 88 GAPDMAFPRLNNISF 102
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +2
Query: 482 YSIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 661
++ I+I P + A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP
Sbjct: 217 FAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPA 276
Query: 662 FGIISHI 682
G++S I
Sbjct: 277 AGLVSMI 283
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
S+ ++ P ++ A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP
Sbjct: 228 SVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAM 287
Query: 665 GIIS 676
GI+S
Sbjct: 288 GIVS 291
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +2
Query: 470 SCRDYSIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 649
+C ++ I+ P+L A+ +L DR L+ F GG+P++Y +LF +GHPEVYIL
Sbjct: 231 TCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYIL 290
Query: 650 ILPGFGIISHI 682
ILP FG+ S +
Sbjct: 291 ILPAFGVFSEV 301
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = +2
Query: 470 SCRDYSIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 649
+C ++ I P+L GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL
Sbjct: 232 TCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYIL 291
Query: 650 ILPGFGIISHI 682
+LP FGI S +
Sbjct: 292 VLPAFGIFSEV 302
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/66 (50%), Positives = 40/66 (60%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
S I+ P L A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P
Sbjct: 215 SFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPAL 273
Query: 665 GIISHI 682
G++S I
Sbjct: 274 GMVSSI 279
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G L LL+R +L P + D + YN + + H ++PL+LG
Sbjct: 54 GVILALLMRLQLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLMLGT 112
Query: 181 PDIAFPRIN 207
D+ FPR+N
Sbjct: 113 RDMTFPRLN 121
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = +2
Query: 482 YSIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 661
+++ I+ P + A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP
Sbjct: 276 FALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPA 335
Query: 662 FGIISHI 682
G++S I
Sbjct: 336 AGMVSMI 342
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 66.9 bits (156), Expect = 4e-10
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +2
Query: 497 IIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 676
+I PVL A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++
Sbjct: 196 LIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVF 255
Query: 677 HI 682
I
Sbjct: 256 EI 257
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 10 LRLLIRAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 186
+ +LIR EL G I DD +YNT + H N +PL++GA D
Sbjct: 35 MAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKD 94
Query: 187 IAFPRIN 207
+AFPR+N
Sbjct: 95 VAFPRVN 101
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 66.5 bits (155), Expect = 6e-10
Identities = 37/77 (48%), Positives = 44/77 (57%), Gaps = 11/77 (14%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGH 631
S ++ VL A +L DR TSFF P+G GG +L+QHLF FFGH
Sbjct: 229 SCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGH 288
Query: 632 PEVYILILPGFGIISHI 682
PEVYI ILP GI+SHI
Sbjct: 289 PEVYIAILPAMGIVSHI 305
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 66.1 bits (154), Expect = 8e-10
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
GT +LIR EL PG+ I G+ Q+YN ++TAHA N VP+++
Sbjct: 32 GTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILI 91
Query: 175 GAPDIAFPRINNIRF 219
G+PD+AFPR+NNI F
Sbjct: 92 GSPDMAFPRLNNISF 106
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = +2
Query: 497 IIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 676
I P++ G+I +L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++
Sbjct: 239 IAFPPLIIGSI-LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVA 297
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/65 (47%), Positives = 40/65 (61%)
Frame = +2
Query: 488 IFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 667
+ I+ PVL A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP FG
Sbjct: 233 VIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFG 292
Query: 668 IISHI 682
I S I
Sbjct: 293 IFSEI 297
Score = 42.3 bits (95), Expect = 0.011
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = +1
Query: 16 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 195
L++RA+L P + D YN I T H N +VPL +GA D+AF
Sbjct: 76 LMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAF 134
Query: 196 PRINNIRF 219
P +NN+ F
Sbjct: 135 PYLNNLSF 142
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 10/76 (13%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHP 634
+I ++ PVL A +L+ DR+L TSFF AG GG P+L+QHLF F GHP
Sbjct: 244 AIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHP 303
Query: 635 EVYILILPGFGIISHI 682
EVYI+++P GI S +
Sbjct: 304 EVYIVLIPALGITSEV 319
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/93 (36%), Positives = 55/93 (59%)
Frame = +3
Query: 210 YKILTPTPLPYIINFRRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 389
+ +L P+ L +++ +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 120 FVVLLPSMLFAVLSC--LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIF 177
Query: 390 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 488
+ +LPLFV +V ITA
Sbjct: 178 GAINLMVTIINMRANGMDYSKLPLFVWSVLITA 210
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
++ II+ PVLA +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI
Sbjct: 210 AVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTS 266
Query: 665 GI 670
GI
Sbjct: 267 GI 268
Score = 56.0 bits (129), Expect = 8e-07
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
G SL +L+R EL NP L+ + Q++N ++TAHA N LVPL +
Sbjct: 46 GLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQI 105
Query: 175 GAPDIAFPRINNIRF 219
G+ D AFPRINN+ F
Sbjct: 106 GSNDTAFPRINNLAF 120
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = +2
Query: 509 PVLAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 682
P++ G +LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +
Sbjct: 210 PLMVGG-ALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADV 265
Score = 36.7 bits (81), Expect = 0.53
Identities = 24/71 (33%), Positives = 31/71 (43%)
Frame = +1
Query: 7 SLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 186
SL LL R +L P S Y VT H N +VPL +GA D
Sbjct: 41 SLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPFAFGLA-NYIVPLQIGARD 99
Query: 187 IAFPRINNIRF 219
+AFPR+N + +
Sbjct: 100 LAFPRLNALSY 110
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/71 (45%), Positives = 43/71 (60%)
Frame = +2
Query: 470 SCRDYSIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 649
+C +I I+I P+L + + DR L+T F+ GG +LY +L +GHPEVYIL
Sbjct: 226 TCLCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYIL 285
Query: 650 ILPGFGIISHI 682
ILP FGI S I
Sbjct: 286 ILPSFGIFSEI 296
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
+I + P+L A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP F
Sbjct: 255 NIIALTAFPILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAF 314
Query: 665 GIISHI 682
G IS I
Sbjct: 315 GFISEI 320
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 63.3 bits (147), Expect = 5e-09
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +2
Query: 488 IFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 658
+ + P++AG + + +R + FFDP GGDP+L+QHLF FGHPEVYI+ LP
Sbjct: 236 MILFAFPPLIAGDLLFEM-ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLP 291
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 63.3 bits (147), Expect = 5e-09
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 11/69 (15%)
Frame = +2
Query: 509 PVLAGAITILLTDRNLNTSFFDP-----------AGGGDPILYQHLF*FFGHPEVYILIL 655
PVL A ++L DR + T FF P AGGG P+L+QHLF F+ HP VYI+IL
Sbjct: 238 PVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVYIMIL 297
Query: 656 PGFGIISHI 682
P G++S I
Sbjct: 298 PAMGMVSDI 306
Score = 35.9 bits (79), Expect = 0.92
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 67 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 219
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSY 136
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +2
Query: 509 PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 682
P++ G+I + L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I
Sbjct: 217 PLILGSILLEL-ERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTI 273
Score = 36.7 bits (81), Expect = 0.53
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G L +LIRA+L P S + YN + T H L+P +LG+
Sbjct: 47 GGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLGS 105
Query: 181 PDIAFPRINNIRF 219
D+AFPR+ F
Sbjct: 106 RDLAFPRLTAYGF 118
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 63.3 bits (147), Expect = 5e-09
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = +2
Query: 515 LAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 682
L A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ +
Sbjct: 212 LTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEV 267
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +1
Query: 16 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 195
LLIR +L P + + YN I+T H N +VPL+LGA D+A
Sbjct: 47 LLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVAL 106
Query: 196 PRIN 207
PR+N
Sbjct: 107 PRVN 110
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = +3
Query: 225 PTPLPYIINFRRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 383
P+ L Y+I+ +VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 2 PSLLLYVIS--SMVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = +2
Query: 509 PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 682
P++ G+I + L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I
Sbjct: 217 PLILGSILLEL-ERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTI 273
Score = 33.1 bits (72), Expect = 6.5
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G L +LIRA+L +P S + Y + T H L+P +LG+
Sbjct: 47 GGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKMLGS 105
Query: 181 PDIAFPRINNIRF 219
D+A+PR++ F
Sbjct: 106 RDLAYPRLSAYGF 118
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
GT L +IR EL N GS L G+ Q +N ++TAHA N L+PL+L
Sbjct: 34 GTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLML 93
Query: 175 GAPDIAFPRINNIRF 219
GA D+AF R+NNI F
Sbjct: 94 GASDMAFARLNNISF 108
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +2
Query: 497 IIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 655
I+ P+LAG IT+LL+DRN N FF GG PIL+Q++ FGH +V LIL
Sbjct: 29 ILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
+I +I P L L DR L+ FF GG+ + + ++F FGHPEVYILILP F
Sbjct: 256 AIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAF 315
Query: 665 GIISHI 682
G+ S I
Sbjct: 316 GVYSEI 321
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 261 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 359
+VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 33 MVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +1
Query: 487 HFYYYYHSCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 630
+F + +CFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 105 YFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 33.9 bits (74), Expect = 3.7
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 166 LILGAPDIAFPRINNIRF 219
L+LGAPD+AFPR+NN+ F
Sbjct: 1 LMLGAPDMAFPRMNNMSF 18
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 174
GT++ ++IR EL PG+ L G+ Q++N +V HA N L+PL++
Sbjct: 29 GTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMI 88
Query: 175 GAPDIAFPRINNIRF 219
GA D++F R+NNI F
Sbjct: 89 GASDMSFARLNNISF 103
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 53.2 bits (122), Expect = 6e-06
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Frame = +2
Query: 509 PVLAGAITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILIL 655
PVL + + DR T FF P+G GG P+L+QHLF F+ HP VYI++L
Sbjct: 241 PVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGGQPLLWQHLFWFYSHPAVYIMLL 300
Query: 656 PGFGIIS 676
P G++S
Sbjct: 301 PIMGMVS 307
Score = 34.7 bits (76), Expect = 2.1
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 67 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 219
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSY 140
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 664
SI ++ L A + + L S F+P GG P+LYQ F F+ HP VY+++LP
Sbjct: 210 SILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYL 269
Query: 665 GI 670
GI
Sbjct: 270 GI 271
Score = 37.5 bits (83), Expect = 0.30
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G L L IR +L P + YN ++T HA N +PL LG
Sbjct: 50 GGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLGV 109
Query: 181 PDIAFPRIN 207
D+A PR+N
Sbjct: 110 RDVALPRLN 118
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/55 (38%), Positives = 36/55 (65%)
Frame = +2
Query: 503 ITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 667
+ P + G +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G
Sbjct: 228 VFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTG 281
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 620 FFGHPEVYILILPGFGIISHI 682
FFGHPEVYILILPGFG+ISHI
Sbjct: 2 FFGHPEVYILILPGFGMISHI 22
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +3
Query: 273 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 383
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 37.9 bits (84), Expect = 0.23
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +2
Query: 494 IIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 622
+I+ PVLA AIT+L R N SFF P G P + F F
Sbjct: 185 LILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
Score = 36.7 bits (81), Expect = 0.53
Identities = 25/73 (34%), Positives = 30/73 (41%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G L R L G +IG QI VTA A L PL +GA
Sbjct: 20 GXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGA 79
Query: 181 PDIAFPRINNIRF 219
P +A PR+ N+ F
Sbjct: 80 PXMAXPRLXNMSF 92
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 46.0 bits (104), Expect = 9e-04
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 11/65 (16%)
Frame = +2
Query: 515 LAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEVYILILPG 661
L A+ IL +D L T++F D G +L+ HLF FFGHPEVYI+ P
Sbjct: 213 LLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIVFFPA 272
Query: 662 FGIIS 676
G+++
Sbjct: 273 LGVMA 277
Score = 37.9 bits (84), Expect = 0.23
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 180
G L LL R EL + G+ + YN V+ H N LVPL +GA
Sbjct: 40 GGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPFAFGFA-NYLVPLQIGA 98
Query: 181 PDIAFPRINNIRF 219
D+AFPR+N + +
Sbjct: 99 DDLAFPRLNALSY 111
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2
Query: 620 FFGHPEVYILILPGFGIISHI 682
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 41.9 bits (94), Expect = 0.014
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHA 99
G+S+ +LIR EL GS++ +QIYNT+VT+HA
Sbjct: 14 GSSMSMLIRLELETCGSVLRSEQIYNTLVTSHA 46
Score = 39.9 bits (89), Expect = 0.056
Identities = 16/26 (61%), Positives = 23/26 (88%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNT 562
++ +++ PVLAGAIT+LLTDRN+NT
Sbjct: 176 AVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 40.7 bits (91), Expect = 0.032
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 607 TFILIFWTS*SLYFNFTRIWYNFSY 681
+ ++IFW+S SLYFN IWYNF Y
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPY 26
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 39.1 bits (87), Expect = 0.099
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1
Query: 508 SCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 618
+C WSYYN IN SKLKYI+F F+ST IL
Sbjct: 98 TCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.7 bits (81), Expect = 0.53
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 494 IIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 670
+++ +P + L+D + F+ G P+ Y F F HPEVY+ ILP F I
Sbjct: 289 LVVESPATYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFHPEVYVFILPAFAI 346
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 36.3 bits (80), Expect = 0.70
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 479 DYSIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 658
++ ++ I+I PV AI IL L+ D +P+L + LF FFGHP VY +LP
Sbjct: 178 NFILWTIMIVPV---AIEILFQLLPLSLGLVDEI---NPLLARTLFWFFGHPVVYFWLLP 231
Query: 659 GF 664
+
Sbjct: 232 AY 233
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 36.3 bits (80), Expect = 0.70
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +1
Query: 1 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHA 99
GT++ L+IR EL PGS L G+ Q++N +V HA
Sbjct: 29 GTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 635 EVYILILPGFGIISHI 682
EVYILILPGFG+ISHI
Sbjct: 155 EVYILILPGFGMISHI 170
>UniRef50_Q60AP6 Cluster: Putative membrane protein; n=1;
Methylococcus capsulatus|Rep: Putative membrane protein
- Methylococcus capsulatus
Length = 263
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +2
Query: 476 RDYSIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 655
RD + +++ +T +L G + + + PA GG P + HL G Y LI
Sbjct: 6 RDMNYWLLFVTGLLTGFHCVGMCGALVLAYAAKPASGGRPTPFSHLLYGTGKTLSYTLIG 65
Query: 656 PGFGIISHI 682
GFG+I I
Sbjct: 66 AGFGLIGSI 74
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 485 SIFIIIITPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 658
+I +++ TP LA + ++ +N +F G D ++F FFGHP VY L+ P
Sbjct: 221 AIDMLVATPPLAALLLVMFIGSTVNPNFGINVGLAD-----NMFWFFGHPIVYQLLFP 273
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 584 GGDPILYQHLF*FFGHPEVYILILPGF 664
G DP+L + LF F GHP VY +LP +
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAY 250
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,357,223
Number of Sequences: 1657284
Number of extensions: 8794295
Number of successful extensions: 19055
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 17874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18814
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -