Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20532
         (405 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          26   0.16 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   0.86 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   8.0  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      20   8.0  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.8 bits (54), Expect = 0.16
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
 Frame = -2

Query: 197 PGVEH---VVHARMARHVLCESQHSAD 126
           PGVEH   VVH + +   L E QH+ D
Sbjct: 296 PGVEHFEDVVHKKCSNFTLPEIQHNLD 322


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 0.86
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 112 PRYGASALCWLSHRTWRAIRACTTCSTPGENSP 210
           P  G+      S R +  +     CSTP ENSP
Sbjct: 410 PSPGSDQRSTPSPRVYGNVNENQDCSTPTENSP 442


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = +1

Query: 163 AIRACTTCSTPGENSPVPKSSSNRTTTLIQSKTSGFIFRGWARLYHGPG 309
           AI ACT  +        PK   +    L + K +G     W RL  G G
Sbjct: 12  AICACTVFAQQQAEETAPKKEDSFEVELCKDKDAG----EWFRLVAGEG 56


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 92  EDMRDHHPATVRPRCAGSRTGRGGPF 169
           E+++  HP    P  AGSR   G  F
Sbjct: 415 ENIQKRHPFAYIPFSAGSRNCIGQKF 440


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 92  EDMRDHHPATVRPRCAGSRTGRGGPF 169
           E+++  HP    P  AGSR   G  F
Sbjct: 415 ENIQKRHPFAYIPFSAGSRNCIGQKF 440


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 139 WLSHRTWRAIRACTTCSTPGENSPVPK 219
           W S+R  R  +  T+ +TP   S  P+
Sbjct: 267 WFSNRRARLRKQITSAATPLVRSYAPE 293


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +1

Query: 151 RTWRAIRACTTCSTPGE 201
           + W+  R+C  C   GE
Sbjct: 79  KIWQMERSCMCCQESGE 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,900
Number of Sequences: 336
Number of extensions: 2081
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)