Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20532
(405 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M21154-1|AAA51716.1| 334|Homo sapiens AMD2 protein. 94 2e-19
BC000171-1|AAH00171.1| 334|Homo sapiens adenosylmethionine deca... 94 2e-19
AL365206-1|CAI23233.1| 334|Homo sapiens adenosylmethionine deca... 94 2e-19
AL357515-1|CAH73388.1| 334|Homo sapiens adenosylmethionine deca... 94 2e-19
AL365206-2|CAI23234.1| 265|Homo sapiens adenosylmethionine deca... 71 1e-12
AL357515-2|CAH73389.1| 265|Homo sapiens adenosylmethionine deca... 71 1e-12
BC041345-1|AAH41345.1| 217|Homo sapiens AMD1 protein protein. 37 0.029
M13843-1|AAA61005.1| 126|Homo sapiens TCRB protein. 29 4.5
BX537970-1|CAD97934.1| 621|Homo sapiens hypothetical protein pr... 29 7.8
>M21154-1|AAA51716.1| 334|Homo sapiens AMD2 protein.
Length = 334
Score = 93.9 bits (223), Expect = 2e-19
Identities = 45/86 (52%), Positives = 61/86 (70%)
Frame = +3
Query: 6 IISFTQSEQVDAYVLSESSMFVSRRRWILKTCGTTTPLRCVRAVLALAQDVAGHSCVHNV 185
IIS T++++ +AYVLSESSMFVS+RR+ILKTCGTT L+ + +L LA+D +G + +
Sbjct: 51 IISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSF 110
Query: 186 FYSRREFARPEVQLKPHDNFDSE*NF 263
FYSR+ F +P Q PH NF E F
Sbjct: 111 FYSRKNFMKPSHQGYPHRNFQEEIEF 136
Score = 35.1 bits (77), Expect = 0.090
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 254 VKLLDSFFGDGRAYIMGP-EKDCWYLYTL 337
++ L++ F +G Y MG DCWYLYTL
Sbjct: 134 IEFLNAIFPNGAGYCMGRMNSDCWYLYTL 162
>BC000171-1|AAH00171.1| 334|Homo sapiens adenosylmethionine
decarboxylase 1 protein.
Length = 334
Score = 93.9 bits (223), Expect = 2e-19
Identities = 45/86 (52%), Positives = 61/86 (70%)
Frame = +3
Query: 6 IISFTQSEQVDAYVLSESSMFVSRRRWILKTCGTTTPLRCVRAVLALAQDVAGHSCVHNV 185
IIS T++++ +AYVLSESSMFVS+RR+ILKTCGTT L+ + +L LA+D +G + +
Sbjct: 51 IISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSF 110
Query: 186 FYSRREFARPEVQLKPHDNFDSE*NF 263
FYSR+ F +P Q PH NF E F
Sbjct: 111 FYSRKNFMKPSHQGYPHRNFQEEIEF 136
Score = 36.7 bits (81), Expect = 0.029
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 254 VKLLDSFFGDGRAYIMGP-EKDCWYLYTL 337
++ L++ F +G AY MG DCWYLYTL
Sbjct: 134 IEFLNAIFPNGAAYCMGRMNSDCWYLYTL 162
>AL365206-1|CAI23233.1| 334|Homo sapiens adenosylmethionine
decarboxylase 1 protein.
Length = 334
Score = 93.9 bits (223), Expect = 2e-19
Identities = 45/86 (52%), Positives = 61/86 (70%)
Frame = +3
Query: 6 IISFTQSEQVDAYVLSESSMFVSRRRWILKTCGTTTPLRCVRAVLALAQDVAGHSCVHNV 185
IIS T++++ +AYVLSESSMFVS+RR+ILKTCGTT L+ + +L LA+D +G + +
Sbjct: 51 IISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSF 110
Query: 186 FYSRREFARPEVQLKPHDNFDSE*NF 263
FYSR+ F +P Q PH NF E F
Sbjct: 111 FYSRKNFMKPSHQGYPHRNFQEEIEF 136
Score = 36.7 bits (81), Expect = 0.029
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 254 VKLLDSFFGDGRAYIMGP-EKDCWYLYTL 337
++ L++ F +G AY MG DCWYLYTL
Sbjct: 134 IEFLNAIFPNGAAYCMGRMNSDCWYLYTL 162
>AL357515-1|CAH73388.1| 334|Homo sapiens adenosylmethionine
decarboxylase 1 protein.
Length = 334
Score = 93.9 bits (223), Expect = 2e-19
Identities = 45/86 (52%), Positives = 61/86 (70%)
Frame = +3
Query: 6 IISFTQSEQVDAYVLSESSMFVSRRRWILKTCGTTTPLRCVRAVLALAQDVAGHSCVHNV 185
IIS T++++ +AYVLSESSMFVS+RR+ILKTCGTT L+ + +L LA+D +G + +
Sbjct: 51 IISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSF 110
Query: 186 FYSRREFARPEVQLKPHDNFDSE*NF 263
FYSR+ F +P Q PH NF E F
Sbjct: 111 FYSRKNFMKPSHQGYPHRNFQEEIEF 136
Score = 36.7 bits (81), Expect = 0.029
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 254 VKLLDSFFGDGRAYIMGP-EKDCWYLYTL 337
++ L++ F +G AY MG DCWYLYTL
Sbjct: 134 IEFLNAIFPNGAAYCMGRMNSDCWYLYTL 162
>AL365206-2|CAI23234.1| 265|Homo sapiens adenosylmethionine
decarboxylase 1 protein.
Length = 265
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = +3
Query: 63 MFVSRRRWILKTCGTTTPLRCVRAVLALAQDVAGHSCVHNVFYSRREFARPEVQLKPHDN 242
MFVS+RR+ILKTCGTT L+ + +L LA+D +G + + FYSR+ F +P Q PH N
Sbjct: 1 MFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRN 60
Query: 243 FDSE*NF 263
F E F
Sbjct: 61 FQEEIEF 67
Score = 36.7 bits (81), Expect = 0.029
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 254 VKLLDSFFGDGRAYIMGP-EKDCWYLYTL 337
++ L++ F +G AY MG DCWYLYTL
Sbjct: 65 IEFLNAIFPNGAAYCMGRMNSDCWYLYTL 93
>AL357515-2|CAH73389.1| 265|Homo sapiens adenosylmethionine
decarboxylase 1 protein.
Length = 265
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = +3
Query: 63 MFVSRRRWILKTCGTTTPLRCVRAVLALAQDVAGHSCVHNVFYSRREFARPEVQLKPHDN 242
MFVS+RR+ILKTCGTT L+ + +L LA+D +G + + FYSR+ F +P Q PH N
Sbjct: 1 MFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRN 60
Query: 243 FDSE*NF 263
F E F
Sbjct: 61 FQEEIEF 67
Score = 36.7 bits (81), Expect = 0.029
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 254 VKLLDSFFGDGRAYIMGP-EKDCWYLYTL 337
++ L++ F +G AY MG DCWYLYTL
Sbjct: 65 IEFLNAIFPNGAAYCMGRMNSDCWYLYTL 93
>BC041345-1|AAH41345.1| 217|Homo sapiens AMD1 protein protein.
Length = 217
Score = 36.7 bits (81), Expect = 0.029
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 254 VKLLDSFFGDGRAYIMGP-EKDCWYLYTL 337
++ L++ F +G AY MG DCWYLYTL
Sbjct: 17 IEFLNAIFPNGAAYCMGRMNSDCWYLYTL 45
>M13843-1|AAA61005.1| 126|Homo sapiens TCRB protein.
Length = 126
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 220 SSSNRTTTLIQSKTSGFIFRGWARLYHGPGKRLLV 324
+S+N+T+ + + +S RGW Y GPG RLLV
Sbjct: 88 ASTNQTSMYLCASSSKN--RGWETQYFGPGTRLLV 120
>BX537970-1|CAD97934.1| 621|Homo sapiens hypothetical protein
protein.
Length = 621
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 13 LLRRVSKSTLTYLVRAACSFHEDAGY*RHAGPPPRYGASAL 135
++R + K L LVRA CS + G H G P G L
Sbjct: 170 MMRPIPKDKLEGLVRACCSLGGEQGQPVHMGDPELLGIKEL 210
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,599,714
Number of Sequences: 237096
Number of extensions: 1455637
Number of successful extensions: 3806
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3806
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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