Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20531
         (485 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)              104   4e-23
SB_39360| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.0  
SB_33399| Best HMM Match : Ank (HMM E-Value=0)                         27   6.2  
SB_33148| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-09)                 27   8.2  

>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
          Length = 427

 Score =  104 bits (249), Expect = 4e-23
 Identities = 55/109 (50%), Positives = 72/109 (66%)
 Frame = +1

Query: 22  MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLA 201
           M+D E +  T    +G  MD+N ALQEVLKTALIH GL  GLHEAAK+LDKR+A LC+L+
Sbjct: 1   MSDAEGDDTTQQPAAGGAMDINTALQEVLKTALIHDGLSRGLHEAAKSLDKREAHLCILS 60

Query: 202 ENCDEAAYKKLVQALCNDIRFHWSRLTTTKSLENGLVSARLTRMARQGK 348
            NCDEA Y KLV+ALC +      ++  +K L      A L ++ ++GK
Sbjct: 61  NNCDEAMYVKLVEALCAEHGIPLLKVDDSKKLGEW---AGLCKIDKEGK 106



 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 34/41 (82%), Positives = 40/41 (97%)
 Frame = +3

Query: 255 HQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 377
           H IPL+KVD++KKLGEWAGLCKIDK+GKARK+VGCSCVV+K
Sbjct: 79  HGIPLLKVDDSKKLGEWAGLCKIDKEGKARKVVGCSCVVVK 119


>SB_39360| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 209

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 374 DDNTGAADNFPCLAILVNLAETSPFSKLF 288
           DD    +D +PC+ I+VN++ T   +K F
Sbjct: 10  DDGLTCSDVYPCVEIMVNISSTGSETKKF 38


>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
          Length = 1416

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 398 SVGCAQGLPQVVELILRCNANPY 466
           S+ CA G   VVEL+L   ANPY
Sbjct: 83  SLACAGGHLAVVELLLAHGANPY 105


>SB_33148| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-09)
          Length = 330

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +1

Query: 97  QEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 237
           + +L+    +G ++  L  A   +  R   LCV A  CDE  ++ LV
Sbjct: 70  KSLLQQPCPNGRVILSLAVADLCIGLRLEALCVFAARCDEMTWRVLV 116


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,763,026
Number of Sequences: 59808
Number of extensions: 315179
Number of successful extensions: 859
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1026164244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)