Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20530
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.58 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = -3

Query: 668 ILCRISFVYWQFIIRPLFWGYFNSYVLCFIL*FGICVFIGIIP 540
           +LC   F Y   I+  +++ Y+   +    L F +C++  ++P
Sbjct: 97  LLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVP 139


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 252 MSSISDLKKKKNSCYVYYS 308
           + S + +KK K  CY YY+
Sbjct: 101 LESCAKIKKTKRYCYYYYA 119


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 388 NQKASTQNSQRSLPEIPQPVGRHDSGDTASEIYATVNL 501
           N+K  T    + LP+ P P+G       A+ + A  NL
Sbjct: 262 NRKPRTDFKPQVLPQWPSPIGASHLPYFAAAVAAASNL 299


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 345 YNSTISLCLWMQEF*SKGIDAE 410
           YN    +C W  E   KG  +E
Sbjct: 144 YNDKAGICSWPDEAKKKGCSSE 165


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 125 YTFKLFVYIKNILIHFL 75
           YT  LF  +  +L+HFL
Sbjct: 169 YTLHLFCVLYVVLLHFL 185


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 125 YTFKLFVYIKNILIHFL 75
           YT  LF  +  +L+HFL
Sbjct: 169 YTLHLFCVLYVVLLHFL 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,488
Number of Sequences: 336
Number of extensions: 3476
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)