Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20530
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-P...    30   2.6  
AY058642-1|AAL13871.1|  554|Drosophila melanogaster LD34147p pro...    29   6.0  
AE014134-215|AAF51405.1|  554|Drosophila melanogaster CG5080-PB,...    29   6.0  
AE014134-214|AAF51406.1|  554|Drosophila melanogaster CG5080-PA,...    29   6.0  
AE014297-1047|AAF54456.1|  868|Drosophila melanogaster CG8516-PA...    29   7.9  

>AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-PA
           protein.
          Length = 1373

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 501 GGCNKTVATASTSRDNPYEHAYAKLQNEAQNVTVEITPEQR 623
           GGCN      S+S D   +    K Q++ Q+ TV+  P Q+
Sbjct: 293 GGCNSNRTAESSSADGGTQATMGKSQDQEQDQTVKQRPRQQ 333


>AY058642-1|AAL13871.1|  554|Drosophila melanogaster LD34147p
           protein.
          Length = 554

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 334 LVTLITALSACVCGCKNSNQKASTQNSQR--SLPEIPQ 441
           L+  I  LSA V   K S+QKAS Q  +R   LP+ P+
Sbjct: 169 LLEEIQKLSASVAALKESSQKASDQTQKRLEGLPKAPE 206


>AE014134-215|AAF51405.1|  554|Drosophila melanogaster CG5080-PB,
           isoform B protein.
          Length = 554

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 334 LVTLITALSACVCGCKNSNQKASTQNSQR--SLPEIPQ 441
           L+  I  LSA V   K S+QKAS Q  +R   LP+ P+
Sbjct: 169 LLEEIQKLSASVAALKESSQKASDQTQKRLEGLPKAPE 206


>AE014134-214|AAF51406.1|  554|Drosophila melanogaster CG5080-PA,
           isoform A protein.
          Length = 554

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 334 LVTLITALSACVCGCKNSNQKASTQNSQR--SLPEIPQ 441
           L+  I  LSA V   K S+QKAS Q  +R   LP+ P+
Sbjct: 169 LLEEIQKLSASVAALKESSQKASDQTQKRLEGLPKAPE 206


>AE014297-1047|AAF54456.1|  868|Drosophila melanogaster CG8516-PA
           protein.
          Length = 868

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +1

Query: 388 NQKASTQNSQRSLPEIPQPVGRHDSGDTASEIYATV 495
           ++K S+  + RSLP+IP      +S D  SE+Y TV
Sbjct: 92  SEKRSSTAAHRSLPDIPVA----ESNDNGSELYETV 123


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,438,068
Number of Sequences: 53049
Number of extensions: 599588
Number of successful extensions: 1879
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1879
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)