Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20528
(686 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 3.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 3.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 3.6
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 22 4.8
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 22 4.8
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 22 4.8
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 8.3
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 8.3
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 8.3
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 8.3
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 8.3
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 3.6
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -1
Query: 614 YSCIVSILV*DEKRSFNLTTVRIM-TITVEYLFI*IVLSTFTAPLNVIVTI 465
YSC+ L+ R+F TTV I I V FI L P V++ +
Sbjct: 287 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGV 337
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 3.6
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -1
Query: 614 YSCIVSILV*DEKRSFNLTTVRIM-TITVEYLFI*IVLSTFTAPLNVIVTI 465
YSC+ L+ R+F TTV I I V FI L P V++ +
Sbjct: 256 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGV 306
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 3.6
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -1
Query: 614 YSCIVSILV*DEKRSFNLTTVRIM-TITVEYLFI*IVLSTFTAPLNVIVTI 465
YSC+ L+ R+F TTV I I V FI L P V++ +
Sbjct: 307 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGV 357
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 3.6
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -1
Query: 614 YSCIVSILV*DEKRSFNLTTVRIM-TITVEYLFI*IVLSTFTAPLNVIVTI 465
YSC+ L+ R+F TTV I I V FI L P V++ +
Sbjct: 256 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGV 306
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 22.2 bits (45), Expect = 4.8
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 109 WVHRIYFTVFSFNYLKLLATYY-CGETTFGTSVHFVV 2
+V ++YF + KL CGE T G +H+ V
Sbjct: 110 FVGKMYFNLIDTKCYKLEHPVTGCGERTEGRCLHYTV 146
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.2 bits (45), Expect = 4.8
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 109 WVHRIYFTVFSFNYLKLLATYY-CGETTFGTSVHFVV 2
+V ++YF + KL CGE T G +H+ V
Sbjct: 115 FVGKMYFNLIDTKCYKLEHPVTGCGERTEGRCLHYTV 151
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.2 bits (45), Expect = 4.8
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 109 WVHRIYFTVFSFNYLKLLATYY-CGETTFGTSVHFVV 2
+V ++YF + KL CGE T G +H+ V
Sbjct: 115 FVGKMYFNLIDTKCYKLEHPVTGCGERTEGRCLHYTV 151
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.3
Identities = 14/73 (19%), Positives = 32/73 (43%)
Frame = -1
Query: 419 SAEQKQSGRTHWLGSQSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQPIYLQ 240
+++++ RT S+ + S S +S+ ++ N ++ Q P+P P+Y
Sbjct: 62 TSKERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYG 121
Query: 239 DK*VRPFSRLVKL 201
+ RP + +
Sbjct: 122 NFPPRPMGSWISI 134
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.3
Identities = 14/73 (19%), Positives = 32/73 (43%)
Frame = -1
Query: 419 SAEQKQSGRTHWLGSQSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQPIYLQ 240
+++++ RT S+ + S S +S+ ++ N ++ Q P+P P+Y
Sbjct: 62 TSKERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYG 121
Query: 239 DK*VRPFSRLVKL 201
+ RP + +
Sbjct: 122 NFPPRPMGSWISI 134
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.3
Identities = 14/73 (19%), Positives = 32/73 (43%)
Frame = -1
Query: 419 SAEQKQSGRTHWLGSQSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQPIYLQ 240
+++++ RT S+ + S S +S+ ++ N ++ Q P+P P+Y
Sbjct: 62 TSKERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYG 121
Query: 239 DK*VRPFSRLVKL 201
+ RP + +
Sbjct: 122 NFPPRPMGSWISI 134
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.3
Identities = 14/73 (19%), Positives = 32/73 (43%)
Frame = -1
Query: 419 SAEQKQSGRTHWLGSQSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQPIYLQ 240
+++++ RT S+ + S S +S+ ++ N ++ Q P+P P+Y
Sbjct: 62 TSKERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYG 121
Query: 239 DK*VRPFSRLVKL 201
+ RP + +
Sbjct: 122 NFPPRPMGSWISI 134
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.3
Identities = 14/73 (19%), Positives = 32/73 (43%)
Frame = -1
Query: 419 SAEQKQSGRTHWLGSQSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQPIYLQ 240
+++++ RT S+ + S S +S+ ++ N ++ Q P+P P+Y
Sbjct: 62 TSKERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYG 121
Query: 239 DK*VRPFSRLVKL 201
+ RP + +
Sbjct: 122 NFPPRPMGSWISI 134
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,034
Number of Sequences: 438
Number of extensions: 4218
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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