Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20526
(664 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L29222-1|AAB59459.1| 136|Homo sapiens clk1 protein. 33 0.91
L29219-1|AAA61480.1| 484|Homo sapiens clk1 protein. 33 0.91
BC031549-1|AAH31549.1| 484|Homo sapiens CDC-like kinase 1 protein. 33 0.91
BC028149-1|AAH28149.1| 136|Homo sapiens CDC-like kinase 1 protein. 33 0.91
AC005037-5|AAY14722.1| 484|Homo sapiens unknown protein. 33 0.91
BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 2.1
BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein. 32 2.1
BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein. 32 2.1
BC008208-1|AAH08208.1| 208|Homo sapiens DDX42 protein protein. 32 2.1
AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens ... 32 2.1
AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related pr... 32 2.1
BC065194-1|AAH65194.1| 487|Homo sapiens membrane bound O-acyltr... 31 4.9
BC000664-1|AAH00664.2| 436|Homo sapiens MBOAT5 protein protein. 31 4.9
>L29222-1|AAB59459.1| 136|Homo sapiens clk1 protein.
Length = 136
Score = 33.1 bits (72), Expect = 0.91
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 247 KWCNQHTEENRKRKYTEGKDGKQKRYSEDKSKNSHGQQSKSAPSK 381
KW + + + RKR ++ ++ K+ +Y+ K +SH +S+S K
Sbjct: 21 KWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDSHYLESRSINEK 65
>L29219-1|AAA61480.1| 484|Homo sapiens clk1 protein.
Length = 484
Score = 33.1 bits (72), Expect = 0.91
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 247 KWCNQHTEENRKRKYTEGKDGKQKRYSEDKSKNSHGQQSKSAPSK 381
KW + + + RKR ++ ++ K+ +Y+ K +SH +S+S K
Sbjct: 21 KWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDSHYLESRSINEK 65
>BC031549-1|AAH31549.1| 484|Homo sapiens CDC-like kinase 1 protein.
Length = 484
Score = 33.1 bits (72), Expect = 0.91
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 247 KWCNQHTEENRKRKYTEGKDGKQKRYSEDKSKNSHGQQSKSAPSK 381
KW + + + RKR ++ ++ K+ +Y+ K +SH +S+S K
Sbjct: 21 KWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDSHYLESRSINEK 65
>BC028149-1|AAH28149.1| 136|Homo sapiens CDC-like kinase 1 protein.
Length = 136
Score = 33.1 bits (72), Expect = 0.91
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 247 KWCNQHTEENRKRKYTEGKDGKQKRYSEDKSKNSHGQQSKSAPSK 381
KW + + + RKR ++ ++ K+ +Y+ K +SH +S+S K
Sbjct: 21 KWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDSHYLESRSINEK 65
>AC005037-5|AAY14722.1| 484|Homo sapiens unknown protein.
Length = 484
Score = 33.1 bits (72), Expect = 0.91
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 247 KWCNQHTEENRKRKYTEGKDGKQKRYSEDKSKNSHGQQSKSAPSK 381
KW + + + RKR ++ ++ K+ +Y+ K +SH +S+S K
Sbjct: 21 KWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDSHYLESRSINEK 65
>BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 42 protein.
Length = 938
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 256 NQHTEENRKRKYTEGKDGKQKRYSEDK--SKNSHGQ 357
N N R+ T G +GK++RY+E++ S++SHG+
Sbjct: 788 NNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGE 823
>BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein.
Length = 919
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 256 NQHTEENRKRKYTEGKDGKQKRYSEDK--SKNSHGQ 357
N N R+ T G +GK++RY+E++ S++SHG+
Sbjct: 769 NNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGE 804
>BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein.
Length = 819
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 256 NQHTEENRKRKYTEGKDGKQKRYSEDK--SKNSHGQ 357
N N R+ T G +GK++RY+E++ S++SHG+
Sbjct: 669 NNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGE 704
>BC008208-1|AAH08208.1| 208|Homo sapiens DDX42 protein protein.
Length = 208
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 256 NQHTEENRKRKYTEGKDGKQKRYSEDK--SKNSHGQ 357
N N R+ T G +GK++RY+E++ S++SHG+
Sbjct: 58 NNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGE 93
>AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45488 fis, clone BRTHA2003759. ).
Length = 130
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/86 (20%), Positives = 38/86 (44%)
Frame = -1
Query: 529 LFFSIILQYFLNGYHHVID*IFLTIVSFVSFFFQLYFLRLQTLMQFLYLILMEHFLIVDH 350
++ I + F+ Y +V I+L I ++ + LY + ++YL + + +
Sbjct: 13 MYIFIFIYIFIYIYIYVYVYIYLYIYFYIFTYIYLYIFIYIYICLYIYLYIYLYIFTYIY 72
Query: 349 DYFCFYLHYIFFVYHLFPLCIFVSYF 272
Y +++ F+Y L IF+ F
Sbjct: 73 IYLHIFIYLHIFIYICICLYIFIYVF 98
>AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related
protein protein.
Length = 938
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 256 NQHTEENRKRKYTEGKDGKQKRYSEDK--SKNSHGQ 357
N N R+ T G +GK++RY+E++ S++SHG+
Sbjct: 788 NNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGE 823
>BC065194-1|AAH65194.1| 487|Homo sapiens membrane bound
O-acyltransferase domain containing 5 protein.
Length = 487
Score = 30.7 bits (66), Expect = 4.9
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 454 VSFVSFFFQLYFLRLQTLMQFLYLILMEHFLIVDHDYFCFYLHYIFFVYH 305
+++ +F QLY L ++QFL L LM + FCF + Y+ Y+
Sbjct: 81 IAYFNFGNQLYHSLLCIVLQFLILRLMGRTITAVLTTFCFQMAYLLAGYY 130
>BC000664-1|AAH00664.2| 436|Homo sapiens MBOAT5 protein protein.
Length = 436
Score = 30.7 bits (66), Expect = 4.9
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 454 VSFVSFFFQLYFLRLQTLMQFLYLILMEHFLIVDHDYFCFYLHYIFFVYH 305
+++ +F QLY L ++QFL L LM + FCF + Y+ Y+
Sbjct: 30 IAYFNFGNQLYHSLLCIVLQFLILRLMGRTITAVLTTFCFQMAYLLAGYY 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,678,215
Number of Sequences: 237096
Number of extensions: 1189726
Number of successful extensions: 3212
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3201
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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