Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20526
         (664 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011411-1|AAR96203.1|  492|Drosophila melanogaster AT18503p pro...    29   4.3  
AY069867-1|AAL40012.1|  450|Drosophila melanogaster SD10857p pro...    29   4.3  
AE014298-2776|AAN09479.1|  608|Drosophila melanogaster CG32543-P...    28   9.9  
AE013599-3720|AAM68275.2|  489|Drosophila melanogaster CG11184-P...    28   9.9  
AE013599-3719|AAF47091.2|  492|Drosophila melanogaster CG11184-P...    28   9.9  

>BT011411-1|AAR96203.1|  492|Drosophila melanogaster AT18503p
           protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +1

Query: 277 RKRKYTEGKDGKQKRYSEDKSKNSHGQQSKSAPS 378
           R +K  +G+  + K+  +DK K+S G+Q+K++ S
Sbjct: 283 RDKKKDDGQGKQDKQDKQDKGKSSSGKQNKNSKS 316


>AY069867-1|AAL40012.1|  450|Drosophila melanogaster SD10857p
           protein.
          Length = 450

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +1

Query: 277 RKRKYTEGKDGKQKRYSEDKSKNSHGQQSKSAPS 378
           R +K  +G+  + K+  +DK K+S G+Q+K++ S
Sbjct: 283 RDKKKDDGQGKQDKQDKQDKGKSSSGKQNKNSKS 316


>AE014298-2776|AAN09479.1|  608|Drosophila melanogaster CG32543-PA
           protein.
          Length = 608

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 268 EENRKRKYTEGKDGKQKRYSEDKSKNSHGQQSKSA 372
           EE RKR+     +GK+    +DK K++H +   S+
Sbjct: 540 EEARKRRKKRNSEGKKLSSQDDKDKDAHERAGGSS 574


>AE013599-3720|AAM68275.2|  489|Drosophila melanogaster CG11184-PC,
           isoform C protein.
          Length = 489

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 277 RKRKYTEGKDGKQKRYSEDKSKNSHGQQSKSAPS 378
           R +K  +G+  + K+  +DK K S G+Q+K++ S
Sbjct: 283 RDKKKDDGQGKQDKQDKQDKGKPSSGKQNKNSKS 316


>AE013599-3719|AAF47091.2|  492|Drosophila melanogaster CG11184-PB,
           isoform B protein.
          Length = 492

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 277 RKRKYTEGKDGKQKRYSEDKSKNSHGQQSKSAPS 378
           R +K  +G+  + K+  +DK K S G+Q+K++ S
Sbjct: 283 RDKKKDDGQGKQDKQDKQDKGKPSSGKQNKNSKS 316


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,648,943
Number of Sequences: 53049
Number of extensions: 368629
Number of successful extensions: 1200
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)