Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20526
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC199160-2|ABO33282.1| 222|Caenorhabditis elegans Hypothetical ... 32 0.32
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 29 2.2
CU457740-5|CAM36335.1| 361|Caenorhabditis elegans Hypothetical ... 29 3.9
AL023844-10|CAA19530.3| 503|Caenorhabditis elegans Hypothetical... 29 3.9
AL023844-9|CAH04760.1| 512|Caenorhabditis elegans Hypothetical ... 29 3.9
AF026209-10|AAB71273.2| 355|Caenorhabditis elegans Serpentine r... 28 5.1
Z81526-7|CAB04266.2| 330|Caenorhabditis elegans Hypothetical pr... 28 6.8
M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z48334-6|CAA88313.1| 655|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z30974-2|CAD82916.1| 478|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z30974-1|CAA83225.3| 566|Caenorhabditis elegans Hypothetical pr... 27 9.0
AY090485-1|AAM11894.1| 566|Caenorhabditis elegans high-affinity... 27 9.0
AF314467-1|AAG41979.1| 655|Caenorhabditis elegans APC6 protein. 27 9.0
AF067942-4|AAG45573.2| 324|Caenorhabditis elegans Hypothetical ... 27 9.0
>AC199160-2|ABO33282.1| 222|Caenorhabditis elegans Hypothetical
protein CE7X_3.2 protein.
Length = 222
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 250 WCNQHTEENRKRKYTEGKDGKQKRYSEDKSKNSHGQQS 363
WC + T+E+R+R+ +E K+ +QK D + HG +S
Sbjct: 43 WCAKCTKEDRRRQLSEAKELRQKEGGGD--EEDHGSES 78
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 250 WCNQHTEENRKRKYTEGK-DGKQKRYSEDKSKNSHG 354
WC + T+E+R+R+ +E K D +QK ++ HG
Sbjct: 1165 WCAKCTKEDRRRQLSEAKEDLRQKEEGGGDEEDHHG 1200
>CU457740-5|CAM36335.1| 361|Caenorhabditis elegans Hypothetical
protein C50E10.5 protein.
Length = 361
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 451 SFVSFFFQLYFLRLQTLMQFLYLILMEHFLIVDHDYFCFYLHYIFFV 311
+F S+F L + R F L++ +H +I +FCF+ H FF+
Sbjct: 151 TFASWFI-LDYERTSRWRIFRALLIFQHGIIFVMHWFCFFNHINFFL 196
>AL023844-10|CAA19530.3| 503|Caenorhabditis elegans Hypothetical
protein Y48A6B.6a protein.
Length = 503
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -1
Query: 646 TLRRSLILKSSFSENISVKSSVSPAEVGFTSVSF*SLPPLFFSIILQYFLNGYHH 482
T+RR + + N V S + A TS + PP F I+ Q++LNG H
Sbjct: 100 TIRRRGVGRLLDLINKPVADSNADAFFSSTSEFYFERPPSLFHIVYQFYLNGVIH 154
>AL023844-9|CAH04760.1| 512|Caenorhabditis elegans Hypothetical
protein Y48A6B.6b protein.
Length = 512
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -1
Query: 646 TLRRSLILKSSFSENISVKSSVSPAEVGFTSVSF*SLPPLFFSIILQYFLNGYHH 482
T+RR + + N V S + A TS + PP F I+ Q++LNG H
Sbjct: 136 TIRRRGVGRLLDLINKPVADSNADAFFSSTSEFYFERPPSLFHIVYQFYLNGVIH 190
>AF026209-10|AAB71273.2| 355|Caenorhabditis elegans Serpentine
receptor, class i protein4 protein.
Length = 355
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 337 FYLHYIFFVYHLFPLCIFVSYF 272
F+L+ I F+YH+FP I S +
Sbjct: 141 FHLYSILFIYHIFPCLIAFSLY 162
>Z81526-7|CAB04266.2| 330|Caenorhabditis elegans Hypothetical
protein F33H2.8 protein.
Length = 330
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = -1
Query: 613 FSENISVKSSVSPAEVGFTSVSF*SLPPLFFSIILQYFLNGYHHVID*IFLTIVSFVSFF 434
F+E + K S EV + + L L + +L N V+D I L SF FF
Sbjct: 20 FTE-FATKMSAEKKEVSKSEAGYYFLLELASAFVLSAAHNVLFFVLD-IKLIATSFAQFF 77
Query: 433 FQLYFLRL 410
F FL+L
Sbjct: 78 FTFIFLKL 85
>M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical
protein B0303.7 protein.
Length = 493
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 149 PPLPHRSGTSTEELLLKRDSLKKQLQKFKHI 241
PP PHR GTS +L +++ QL+ HI
Sbjct: 112 PPPPHRGGTSPGKLSGSHSAIRSQLENM-HI 141
>Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical
protein K08F4.5 protein.
Length = 215
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 268 EENRKRKYTEGKDGKQKRYSEDKSKNSHGQQSKSAPSK 381
EE ++ K E K+G++K E+K KNS G + K K
Sbjct: 100 EERKEEKKEESKEGEKKNSGEEK-KNS-GDEKKEEGGK 135
>Z48334-6|CAA88313.1| 655|Caenorhabditis elegans Hypothetical
protein F10B5.6 protein.
Length = 655
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 173 TSTEELLLKRDSLKKQLQKFKHISRNGVINILRKIGNEN 289
T T+E++ + LKK++ F H N + +I R+ G N
Sbjct: 474 TETDEIIPIEEVLKKKIDDFWHPMLNNIGHIARRQGRLN 512
>Z30974-2|CAD82916.1| 478|Caenorhabditis elegans Hypothetical
protein K08E5.2b protein.
Length = 478
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 334 YLHYIFFVYHLFPLCIFVSY 275
Y+ +IFF Y L LC+FV++
Sbjct: 177 YVTWIFFAYPLMLLCLFVAW 196
>Z30974-1|CAA83225.3| 566|Caenorhabditis elegans Hypothetical
protein K08E5.2a protein.
Length = 566
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 334 YLHYIFFVYHLFPLCIFVSY 275
Y+ +IFF Y L LC+FV++
Sbjct: 265 YVTWIFFAYPLMLLCLFVAW 284
>AY090485-1|AAM11894.1| 566|Caenorhabditis elegans high-affinity
plasma membrane transporterINDY2 protein.
Length = 566
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 334 YLHYIFFVYHLFPLCIFVSY 275
Y+ +IFF Y L LC+FV++
Sbjct: 265 YVTWIFFAYPLMLLCLFVAW 284
>AF314467-1|AAG41979.1| 655|Caenorhabditis elegans APC6 protein.
Length = 655
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 173 TSTEELLLKRDSLKKQLQKFKHISRNGVINILRKIGNEN 289
T T+E++ + LKK++ F H N + +I R+ G N
Sbjct: 474 TETDEIIPIEEVLKKKIDDFWHPMLNNIGHIARRQGRLN 512
>AF067942-4|AAG45573.2| 324|Caenorhabditis elegans Hypothetical
protein ZK6.6 protein.
Length = 324
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 523 FSIILQYFLNGYHHVID*IFLTIVSFVSFFFQ 428
F L FLN YH+VI L ++S + FF Q
Sbjct: 259 FIFFLSPFLNLYHYVIGIPLLCVLSCILFFRQ 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,273,756
Number of Sequences: 27780
Number of extensions: 216253
Number of successful extensions: 943
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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