Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20523
(592 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55039 Cluster: Developmentally-regulated GTP-binding p... 133 3e-30
UniRef50_Q9Y295 Cluster: Developmentally-regulated GTP-binding p... 98 2e-19
UniRef50_A2FCT1 Cluster: GTP-binding protein 1, putative; n=1; T... 96 5e-19
UniRef50_A5K2J6 Cluster: GTP-binding protein, putative; n=2; Pla... 64 2e-18
UniRef50_UPI0000499618 Cluster: GTP-binding protein; n=2; Entamo... 88 1e-16
UniRef50_A2FTR3 Cluster: GTP-binding protein 128UP, putative; n=... 86 7e-16
UniRef50_Q9HI56 Cluster: GTP-binding protein; n=5; Thermoplasmat... 77 3e-13
UniRef50_Q18JR9 Cluster: GTP-binding protein; n=1; Haloquadratum... 75 1e-12
UniRef50_A7D3J9 Cluster: Small GTP-binding protein; n=1; Halorub... 75 2e-12
UniRef50_Q58722 Cluster: Uncharacterized GTP-binding protein MJ1... 73 7e-12
UniRef50_A0B5C1 Cluster: TGS domain protein; n=1; Methanosaeta t... 59 7e-08
UniRef50_UPI00005A12B8 Cluster: PREDICTED: similar to developmen... 52 1e-05
UniRef50_UPI00004987E5 Cluster: GTP-binding protein; n=1; Entamo... 51 2e-05
UniRef50_Q5ULZ0 Cluster: Putative GTP-binding protein; n=1; Frag... 51 2e-05
UniRef50_Q8TW38 Cluster: Predicted GTPase of the OBG/HflX superf... 44 0.002
UniRef50_A5KSZ9 Cluster: GTP1/OBG sub domain protein; n=2; Bacte... 40 0.033
UniRef50_Q74MK9 Cluster: NEQ112; n=1; Nanoarchaeum equitans|Rep:... 39 0.10
UniRef50_Q9YA87 Cluster: GTP-binding protein; n=3; Desulfurococc... 38 0.18
UniRef50_P0C1E6 Cluster: Uncharacterized GTP-binding protein Cgl... 37 0.31
UniRef50_Q2NIK0 Cluster: GTP-binding protein; n=2; Candidatus Ph... 37 0.41
UniRef50_Q7PZX2 Cluster: ENSANGP00000027099; n=1; Anopheles gamb... 36 0.54
UniRef50_Q83NP1 Cluster: GTP-binding protein; n=2; Tropheryma wh... 36 0.94
UniRef50_A5D547 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_A0JXJ8 Cluster: GTP1/OBG sub domain protein; n=2; Arthr... 35 1.6
UniRef50_A1RY00 Cluster: TGS domain protein; n=1; Thermofilum pe... 34 2.2
UniRef50_A4WKD8 Cluster: Cobalamin (Vitamin B12) biosynthesis Cb... 34 2.9
UniRef50_Q8G4U0 Cluster: GTP-binding protein; n=4; Bifidobacteri... 33 3.8
UniRef50_A7S3N8 Cluster: Predicted protein; n=2; Nematostella ve... 33 3.8
UniRef50_A7Q020 Cluster: Chromosome chr8 scaffold_41, whole geno... 33 6.6
UniRef50_Q6PII3 Cluster: Uncharacterized protein C3orf19; n=21; ... 33 6.6
UniRef50_UPI000049A2FF Cluster: exodeoxyribonuclease III; n=1; E... 32 8.7
UniRef50_Q5B6K2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
>UniRef50_P55039 Cluster: Developmentally-regulated GTP-binding
protein 2; n=51; Eukaryota|Rep:
Developmentally-regulated GTP-binding protein 2 - Homo
sapiens (Human)
Length = 364
Score = 133 bits (321), Expect = 3e-30
Identities = 71/112 (63%), Positives = 73/112 (65%)
Frame = +3
Query: 255 ARTQKNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVG 434
ARTQKNKATEYHLGLLKAKLAKYR+QLLEPSK KGEGFDV+KSGDARVALIGFPSVG
Sbjct: 15 ARTQKNKATEYHLGLLKAKLAKYRAQLLEPSKSASSKGEGFDVMKSGDARVALIGFPSVG 74
Query: 435 KXXXXXXXXXXXXEAASXXXXXXXXXXXXXNIAVPTYNC*DLPGIIEGAAQG 590
K EAAS DLPGIIEGAAQG
Sbjct: 75 KSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEGAAQG 126
>UniRef50_Q9Y295 Cluster: Developmentally-regulated GTP-binding
protein 1; n=175; Eukaryota|Rep:
Developmentally-regulated GTP-binding protein 1 - Homo
sapiens (Human)
Length = 367
Score = 97.9 bits (233), Expect = 2e-19
Identities = 54/113 (47%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +3
Query: 255 ARTQKNKATEYHLGLLKAKLAKYRSQLLEP-SKKGGDKGEGFDVLKSGDARVALIGFPSV 431
ARTQKNKAT +HLGLLKA+LAK R +L+ P GG GEGFDV K+GDAR+ +GFPSV
Sbjct: 16 ARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVAKTGDARIGFVGFPSV 75
Query: 432 GKXXXXXXXXXXXXEAASXXXXXXXXXXXXXNIAVPTYNC*DLPGIIEGAAQG 590
GK E A+ DLPGIIEGA G
Sbjct: 76 GKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAKDG 128
>UniRef50_A2FCT1 Cluster: GTP-binding protein 1, putative; n=1;
Trichomonas vaginalis G3|Rep: GTP-binding protein 1,
putative - Trichomonas vaginalis G3
Length = 366
Score = 96.3 bits (229), Expect = 5e-19
Identities = 52/112 (46%), Positives = 63/112 (56%)
Frame = +3
Query: 255 ARTQKNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVG 434
+RTQ NKATE HLGLLKA+LAK R+QL+E + KGGD G FDV ++GDARV L GFPSVG
Sbjct: 15 SRTQINKATERHLGLLKAQLAKLRAQLVEEASKGGDGGPQFDVARTGDARVCLFGFPSVG 74
Query: 435 KXXXXXXXXXXXXEAASXXXXXXXXXXXXXNIAVPTYNC*DLPGIIEGAAQG 590
K E + DLPGI++GA+ G
Sbjct: 75 KSSLLCKLTDKQSEIGDYDFTTLTAVPGILQVNGVDIQLLDLPGILQGASTG 126
>UniRef50_A5K2J6 Cluster: GTP-binding protein, putative; n=2;
Plasmodium|Rep: GTP-binding protein, putative -
Plasmodium vivax
Length = 182
Score = 64.1 bits (149), Expect(2) = 2e-18
Identities = 37/86 (43%), Positives = 44/86 (51%)
Frame = +3
Query: 333 LLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVGKXXXXXXXXXXXXEAASXXXXXXXXX 512
LLE + KGG KGEGFDV + GDAR+ LIGFPSVGK E A
Sbjct: 63 LLE-APKGGKKGEGFDVQRQGDARICLIGFPSVGKSTLLSKITSTTSEIADYEFTTLTCK 121
Query: 513 XXXXNIAVPTYNC*DLPGIIEGAAQG 590
+ DLPGII+GA++G
Sbjct: 122 PGIISYKDSKIQLLDLPGIIQGASEG 147
Score = 50.4 bits (115), Expect(2) = 2e-18
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 255 ARTQKNKATEYHLGLLKAKLAKYR 326
ARTQKNKATEYHLG LKAKLAKYR
Sbjct: 2 ARTQKNKATEYHLGQLKAKLAKYR 25
>UniRef50_UPI0000499618 Cluster: GTP-binding protein; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: GTP-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 365
Score = 88.2 bits (209), Expect = 1e-16
Identities = 48/112 (42%), Positives = 63/112 (56%)
Frame = +3
Query: 255 ARTQKNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVG 434
+RTQ NKAT +H+ +++AK+AKY+ +LL P KK GEGFDV K GDARV ++GFPSVG
Sbjct: 15 SRTQVNKATMHHICMMRAKMAKYQRELLAPEKKVA--GEGFDVAKFGDARVGMVGFPSVG 72
Query: 435 KXXXXXXXXXXXXEAASXXXXXXXXXXXXXNIAVPTYNC*DLPGIIEGAAQG 590
K + A+ ++ DLPGIIEGA G
Sbjct: 73 KSTLLTAMTPTESKIAAYEFTTLTCVPGVMDLKGSQVQLLDLPGIIEGAKDG 124
>UniRef50_A2FTR3 Cluster: GTP-binding protein 128UP, putative; n=2;
Eukaryota|Rep: GTP-binding protein 128UP, putative -
Trichomonas vaginalis G3
Length = 371
Score = 85.8 bits (203), Expect = 7e-16
Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +3
Query: 255 ARTQKNKATEYHLGLLKAKLAKYRSQLLEPS-KKGGDKGEGFDVLKSGDARVALIGFPSV 431
+RTQ NKAT +H+ LLKA+LA+ + +LE + +K G G+G++V +SGDAR+ L GFPSV
Sbjct: 19 SRTQINKATMHHICLLKARLARMKRDILEAATRKAGGPGQGWEVKRSGDARIGLFGFPSV 78
Query: 432 GKXXXXXXXXXXXXEAASXXXXXXXXXXXXXNIAVPTYNC*DLPGIIEGAAQG 590
GK + A+ NI DLPGI+EGAA G
Sbjct: 79 GKSTLLNALTGQSSKVAAYEFTTLTPVPGILNINGAKIQILDLPGILEGAADG 131
>UniRef50_Q9HI56 Cluster: GTP-binding protein; n=5;
Thermoplasmatales|Rep: GTP-binding protein -
Thermoplasma acidophilum
Length = 360
Score = 77.0 bits (181), Expect = 3e-13
Identities = 47/111 (42%), Positives = 55/111 (49%)
Frame = +3
Query: 258 RTQKNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVGK 437
RTQ NKATE+H+GLLKAK+AK + +E S G GF V KSGDA VAL+GFP+VGK
Sbjct: 17 RTQYNKATEHHIGLLKAKIAKLQ---MEASASHGGSHSGFAVPKSGDATVALVGFPNVGK 73
Query: 438 XXXXXXXXXXXXEAASXXXXXXXXXXXXXNIAVPTYNC*DLPGIIEGAAQG 590
E DLPGIIE A+ G
Sbjct: 74 SSLLNRLTNSESEIGDYAFTTLQPIPGILEYKGAEIQILDLPGIIENASYG 124
>UniRef50_Q18JR9 Cluster: GTP-binding protein; n=1; Haloquadratum
walsbyi DSM 16790|Rep: GTP-binding protein -
Haloquadratum walsbyi (strain DSM 16790)
Length = 370
Score = 74.9 bits (176), Expect = 1e-12
Identities = 45/112 (40%), Positives = 57/112 (50%)
Frame = +3
Query: 255 ARTQKNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVG 434
A T NK+TE H+G LKAKLA+ + +L + S GG G G+ V K+GDA VAL+GFPSVG
Sbjct: 15 ANTPYNKSTEEHIGRLKAKLAEKKEKLEQQSSSGG--GYGYAVEKTGDATVALVGFPSVG 72
Query: 435 KXXXXXXXXXXXXEAASXXXXXXXXXXXXXNIAVPTYNC*DLPGIIEGAAQG 590
K E + D+PG+IEGAA G
Sbjct: 73 KSTLINSMTNADSEVGAYEFTTLDVNPGMLQYNGANIQILDVPGLIEGAAGG 124
>UniRef50_A7D3J9 Cluster: Small GTP-binding protein; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Small GTP-binding protein
- Halorubrum lacusprofundi ATCC 49239
Length = 371
Score = 74.5 bits (175), Expect = 2e-12
Identities = 46/112 (41%), Positives = 55/112 (49%)
Frame = +3
Query: 255 ARTQKNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVG 434
A T NK+TE H+G LKAKLA+ + +L S GG G G+ V K GDA VAL+GFPSVG
Sbjct: 17 AGTPYNKSTEAHIGRLKAKLAEKKEKLENQSSAGG--GHGYAVEKHGDATVALVGFPSVG 74
Query: 435 KXXXXXXXXXXXXEAASXXXXXXXXXXXXXNIAVPTYNC*DLPGIIEGAAQG 590
K E S D+PG+IEGAA G
Sbjct: 75 KSTLINALTNADSEVGSYEFTTLDVNPGMLQYRGANIQILDVPGLIEGAAGG 126
>UniRef50_Q58722 Cluster: Uncharacterized GTP-binding protein
MJ1326; n=25; Archaea|Rep: Uncharacterized GTP-binding
protein MJ1326 - Methanococcus jannaschii
Length = 391
Score = 72.5 bits (170), Expect = 7e-12
Identities = 44/111 (39%), Positives = 53/111 (47%)
Frame = +3
Query: 258 RTQKNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVGK 437
+T NKAT+ H+G LKAKLAK R Q S+ GG G+G+ V KSGDA A +GFPSVGK
Sbjct: 40 KTPYNKATQKHIGRLKAKLAKLREQA--QSRGGGGGGKGYAVKKSGDATAAFVGFPSVGK 97
Query: 438 XXXXXXXXXXXXEAASXXXXXXXXXXXXXNIAVPTYNC*DLPGIIEGAAQG 590
E + D PGII GA+ G
Sbjct: 98 STLLNKLTNAKSEVGAYAFTTLTIVPGILEYKGAKIQLLDAPGIIVGASSG 148
>UniRef50_A0B5C1 Cluster: TGS domain protein; n=1; Methanosaeta
thermophila PT|Rep: TGS domain protein - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 346
Score = 59.3 bits (137), Expect = 7e-08
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +3
Query: 258 RTQKNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVGK 437
RTQKNKATE+H+G LKAK+A+ R + + + KG+G V KSGDA V L+G GK
Sbjct: 16 RTQKNKATEHHIGRLKAKIARLREEQEKRTASRAKKGKG--VRKSGDATVTLVGPVGAGK 73
>UniRef50_UPI00005A12B8 Cluster: PREDICTED: similar to
developmentally regulated GTP binding protein 1; n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to
developmentally regulated GTP binding protein 1 - Canis
familiaris
Length = 167
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/48 (54%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 255 ARTQKNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDK-GEGFDVLKSG 395
A+TQKNKAT +H L KA AK +L+ P GG + GEGFDV K+G
Sbjct: 16 AQTQKNKATAHHPELFKAHFAKLHRELITPKGGGGGRPGEGFDVTKTG 63
>UniRef50_UPI00004987E5 Cluster: GTP-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: GTP-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 367
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +3
Query: 255 ARTQKNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVG 434
+RTQ NKAT +H+ LL+ KL KY+ L + GE + GD+RV ++G VG
Sbjct: 15 SRTQVNKATMHHICLLRGKLVKYQKMLAPTKFESCITGEELKSFEYGDSRVGIVGMSGVG 74
Query: 435 K 437
K
Sbjct: 75 K 75
>UniRef50_Q5ULZ0 Cluster: Putative GTP-binding protein; n=1;
Fragaria x ananassa|Rep: Putative GTP-binding protein -
Fragaria ananassa (Strawberry)
Length = 65
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/43 (62%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -1
Query: 460 VRVDKRVDLPTEGKPIKATRASPDFSTSKPSPL-SPPFFEGSS 335
V + RVD PTEGKP K T ASP TSKPSP PPF GSS
Sbjct: 15 VSLFSRVDFPTEGKPTKPTLASPLLVTSKPSPAPPPPFVVGSS 57
>UniRef50_Q8TW38 Cluster: Predicted GTPase of the OBG/HflX
superfamily; n=5; Euryarchaeota|Rep: Predicted GTPase of
the OBG/HflX superfamily - Methanopyrus kandleri
Length = 388
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +3
Query: 267 KNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVGK 437
K+K TE LLK +LAK R ++ + ++ G ++V K G A+VAL+G P+ GK
Sbjct: 38 KHKGTENLRALLKRRLAKLREEVEKRRQQKSGGGPDYNVKKEGAAQVALVGPPNAGK 94
>UniRef50_A5KSZ9 Cluster: GTP1/OBG sub domain protein; n=2;
Bacteria|Rep: GTP1/OBG sub domain protein - candidate
division TM7 genomosp. GTL1
Length = 404
Score = 40.3 bits (90), Expect = 0.033
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +3
Query: 315 AKYRSQLLEPSK--KGGDKGEGFDVLKSGD--ARVALIGFPSVGKXXXXXXXXXXXXEAA 482
A ++S + + + + G+KGE F+ L A V L+GFP+ GK E A
Sbjct: 126 AHFKSSIRQAPRVAENGEKGEAFEALLELKLLADVGLVGFPNAGKSTFLSVVSNARPEIA 185
Query: 483 SXXXXXXXXXXXXXNIAVPTYNC*DLPGIIEGAAQG 590
+I + D+PG+IEGA+QG
Sbjct: 186 DYEFTTLTPNLGVADIDNTSLLIADIPGLIEGASQG 221
>UniRef50_Q74MK9 Cluster: NEQ112; n=1; Nanoarchaeum equitans|Rep:
NEQ112 - Nanoarchaeum equitans
Length = 327
Score = 38.7 bits (86), Expect = 0.10
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +3
Query: 267 KNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVGK 437
K+K TE L LLK +++K R ++ E K+ K + K GD V L+G P+ GK
Sbjct: 38 KHKGTEKLLALLKKEISKTRQEI-EKKKEEAKKLSKKGISKEGDIMVVLVGGPNSGK 93
>UniRef50_Q9YA87 Cluster: GTP-binding protein; n=3;
Desulfurococcales|Rep: GTP-binding protein - Aeropyrum
pernix
Length = 389
Score = 37.9 bits (84), Expect = 0.18
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +3
Query: 267 KNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVGK 437
K+K TE L + +LA+ R +L E K+ G F V KSG + LIG P+ GK
Sbjct: 38 KHKGTENLLLWARRRLAELREELEEKRKRRVGGGPSFFVEKSGAGQAVLIGPPNSGK 94
>UniRef50_P0C1E6 Cluster: Uncharacterized GTP-binding protein
Cgl2357/cg2589; n=47; Actinobacteria (class)|Rep:
Uncharacterized GTP-binding protein Cgl2357/cg2589 -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 501
Score = 37.1 bits (82), Expect = 0.31
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +3
Query: 357 GDKGEGFDVLKS--GDARVALIGFPSVGKXXXXXXXXXXXXEAASXXXXXXXXXXXXXNI 530
G+ GE D++ A V L+GFPS GK + N+
Sbjct: 144 GEPGEAHDLILELKSMADVGLVGFPSAGKSSLISVMSAAKPKIGDYPFTTLQPNLGVVNV 203
Query: 531 AVPTYNC*DLPGIIEGAAQG 590
T+ D+PG+I GA++G
Sbjct: 204 GHETFTMADVPGLIPGASEG 223
>UniRef50_Q2NIK0 Cluster: GTP-binding protein; n=2; Candidatus
Phytoplasma asteris|Rep: GTP-binding protein - Aster
yellows witches'-broom phytoplasma (strain AYWB)
Length = 419
Score = 36.7 bits (81), Expect = 0.41
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +3
Query: 312 LAKYRSQLLEPSKKGGDKGEGFDVLKSGD--ARVALIGFPSVGKXXXXXXXXXXXXEAAS 485
LA +++Q S+KG D GE F + A + L+GFPSVGK + AS
Sbjct: 129 LATFKNQAPSYSEKG-DLGESFKIKTELKVLADIGLLGFPSVGKSSLISAISKAQPKVAS 187
Query: 486 XXXXXXXXXXXXXNIAVPTYNC*DLPGIIEGAAQG 590
+ ++ DLPG+IE A G
Sbjct: 188 YPFTTIKPHLGVVEVDGFSFVVADLPGLIENAHLG 222
>UniRef50_Q7PZX2 Cluster: ENSANGP00000027099; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000027099 - Anopheles gambiae
str. PEST
Length = 180
Score = 36.3 bits (80), Expect = 0.54
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 412 KATRASPDFSTSKPSPLSPPFFEGSSNCDLYF 317
+ + P+F+T +P+P PP F S CD YF
Sbjct: 41 EVAQCDPNFTTLQPNPTGPPAFPHPSRCDAYF 72
>UniRef50_Q83NP1 Cluster: GTP-binding protein; n=2; Tropheryma
whipplei|Rep: GTP-binding protein - Tropheryma whipplei
(strain TW08/27) (Whipple's bacillus)
Length = 445
Score = 35.5 bits (78), Expect = 0.94
Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = +3
Query: 294 GLLKAKLAKYRSQLLEPSKKG--GDKGEGFDVLKSGDARVALIGFPSVGKXXXXXXXXXX 467
GL A LA YR + + G G K + +KS A VAL+GFPSVGK
Sbjct: 129 GLGNAALAGYRRKTPRFALLGLPGQKRKLRLEVKS-IADVALVGFPSVGKSSIISAISSA 187
Query: 468 XXEAASXXXXXXXXXXXXXNIAVPTYNC*DLPGIIEGAAQG 590
+ A Y D+PG++EGA++G
Sbjct: 188 KPKIADYPFTTLHPNLGVVQSGPYRYTVADVPGLVEGASKG 228
>UniRef50_A5D547 Cluster: Putative uncharacterized protein; n=1;
Pelotomaculum thermopropionicum SI|Rep: Putative
uncharacterized protein - Pelotomaculum
thermopropionicum SI
Length = 328
Score = 34.7 bits (76), Expect = 1.6
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +3
Query: 267 KNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVGK 437
K+K TE +K +L++ R + + ++ G + + F V K G +V L+GFP+ GK
Sbjct: 38 KHKGTEKMQADIKRRLSRLREEGQKKARTG--RTDPFFVEKQGAGQVVLLGFPNTGK 92
>UniRef50_A0JXJ8 Cluster: GTP1/OBG sub domain protein; n=2;
Arthrobacter|Rep: GTP1/OBG sub domain protein -
Arthrobacter sp. (strain FB24)
Length = 529
Score = 34.7 bits (76), Expect = 1.6
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +3
Query: 357 GDKGEGFDV---LKSGDARVALIGFPSVGKXXXXXXXXXXXXEAASXXXXXXXXXXXXXN 527
G +GE D+ LKS A +AL+GFPS GK + A
Sbjct: 144 GIEGESSDIVLELKS-IADIALVGFPSAGKSSLIAAMSAARPKIADYPFTTLIPNLGVVQ 202
Query: 528 IAVPTYNC*DLPGIIEGAAQG 590
+ D+PG+IEGA++G
Sbjct: 203 AGDVRFTIADVPGLIEGASEG 223
>UniRef50_A1RY00 Cluster: TGS domain protein; n=1; Thermofilum
pendens Hrk 5|Rep: TGS domain protein - Thermofilum
pendens (strain Hrk 5)
Length = 377
Score = 34.3 bits (75), Expect = 2.2
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +3
Query: 267 KNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFDVLKSGDARVALIGFPSVGK 437
K+K TE + ++A R ++ E K+ GE F V K GD +V LIG GK
Sbjct: 38 KHKGTERLRMQVTRQIAALRREIEERRKRRAGGGEQFFVEKEGDVQVVLIGSLGSGK 94
>UniRef50_A4WKD8 Cluster: Cobalamin (Vitamin B12) biosynthesis CbiM
protein; n=2; Pyrobaculum|Rep: Cobalamin (Vitamin B12)
biosynthesis CbiM protein - Pyrobaculum arsenaticum
(strain DSM 13514 / JCM 11321)
Length = 299
Score = 33.9 bits (74), Expect = 2.9
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = -1
Query: 253 FLSQFLIFSLISP*FGELSDNYLPRSQLIDNVFRLLN*NRIHSINHFILKNYT 95
+L+ LIF LISP FG + N + ++ +DNV +L+ N IN K+YT
Sbjct: 216 YLTLILIFLLISPIFGVILANAVGYAEPLDNVADMLHLNE-SEINWTPFKDYT 267
>UniRef50_Q8G4U0 Cluster: GTP-binding protein; n=4;
Bifidobacterium|Rep: GTP-binding protein -
Bifidobacterium longum
Length = 563
Score = 33.5 bits (73), Expect = 3.8
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = +3
Query: 357 GDKGEGFDVLKS--GDARVALIGFPSVGKXXXXXXXXXXXXEAASXXXXXXXXXXXXXNI 530
G+ GE DV+ A VAL+GFPS GK + A
Sbjct: 153 GELGEERDVILELKSIADVALVGFPSAGKSSLIAAMSSAKPKIADYPFTTLVPNLGVVIA 212
Query: 531 AVPTYNC*DLPGIIEGAAQG 590
Y D+PG+I GA++G
Sbjct: 213 GDSRYTIADVPGLIPGASEG 232
>UniRef50_A7S3N8 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 288
Score = 33.5 bits (73), Expect = 3.8
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -2
Query: 444 GLTYPQKESLSKQLEHHQTLVHRNLHLCLHLFLKVPATVIYILLI--WLLKDPSDIQSLY 271
G + ++E+ +Q + H + + C + L P V YIL I W L+ P + +L+
Sbjct: 196 GQDFARREAREEQQKRHIVKLAATIVFCFAI-LWAPMHVFYILYIFKWHLRLPCGLMALH 254
Query: 270 FSVF 259
FSVF
Sbjct: 255 FSVF 258
>UniRef50_A7Q020 Cluster: Chromosome chr8 scaffold_41, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_41, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1052
Score = 32.7 bits (71), Expect = 6.6
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -1
Query: 460 VRVDKRVDLPTEGKPIKATRASPDFSTSKPSPLSPPFFE 344
VRV K LPT+G P+ S +SKP+ S FFE
Sbjct: 325 VRVVKARSLPTKGNPVVTIAVSGSHVSSKPALKSTSFFE 363
>UniRef50_Q6PII3 Cluster: Uncharacterized protein C3orf19; n=21;
Eumetazoa|Rep: Uncharacterized protein C3orf19 - Homo
sapiens (Human)
Length = 467
Score = 32.7 bits (71), Expect = 6.6
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 258 RTQKNKATEYHLGLLKAKLAKYRSQLLEPSKKGGDKGEGFD 380
RT++ E +L+A+LAK R + ++ SK+GG + E D
Sbjct: 278 RTKRENIKEKRKAILEARLAKLRQKKMKKSKEGGTEEENRD 318
>UniRef50_UPI000049A2FF Cluster: exodeoxyribonuclease III; n=1;
Entamoeba histolytica HM-1:IMSS|Rep:
exodeoxyribonuclease III - Entamoeba histolytica
HM-1:IMSS
Length = 324
Score = 32.3 bits (70), Expect = 8.7
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 154 EKHYQLIDCVVNSCQITRRIMGILEKISEIEKEMREHRKI--KRLNITW 294
EK Y + V+NS Q R+ ++++ +E +K+MREH K K+ N+ W
Sbjct: 165 EKFYLVNSYVMNSGQ---RLENLVKRTTEWDKDMREHLKALQKKKNVIW 210
>UniRef50_Q5B6K2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 581
Score = 32.3 bits (70), Expect = 8.7
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1
Query: 430 TEGKPIKATRASPDFSTSKPSPLSPPFFEGSSNCDLY 320
T KPI TRA+P+ TS PSP P F G N L+
Sbjct: 98 TNTKPIPKTRATPESPTS-PSPYRPNRFYGKPNLWLH 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,099,572
Number of Sequences: 1657284
Number of extensions: 9248534
Number of successful extensions: 26713
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 25698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26660
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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